RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 SMIM5Q71RC9 77 aa15.41■□□□□ 0.06
AP3B1-203ENST00000517940 TTC5Q8N0Z6 440 aa15.41■□□□□ 0.06
AP3B1-203ENST00000517940 AKT1S1Q96B36 256 aa15.41■□□□□ 0.06
AP3B1-203ENST00000517940 INTS5Q6P9B9 1019 aaKnown RBP15.4■□□□□ 0.06
AP3B1-203ENST00000517940 CASZ1Q86V15 1759 aa15.39■□□□□ 0.05
AP3B1-203ENST00000517940 E9PSI1 815 aa15.39■□□□□ 0.05
AP3B1-203ENST00000517940 LRP10Q7Z4F1 713 aa15.39■□□□□ 0.05
AP3B1-203ENST00000517940 CNTNAP4Q9C0A0 1308 aa15.39■□□□□ 0.05
AP3B1-203ENST00000517940 NBPF26B4DH59 902 aa15.38■□□□□ 0.05
AP3B1-203ENST00000517940 SNRPA1P09661 255 aaKnown RBP15.38■□□□□ 0.05
AP3B1-203ENST00000517940 CRKLP46109 303 aaKnown RBP15.38■□□□□ 0.05
AP3B1-203ENST00000517940 EXOSC9Q06265 439 aaKnown RBP15.38■□□□□ 0.05
AP3B1-203ENST00000517940 PDIA6Q15084 440 aa15.38■□□□□ 0.05
AP3B1-203ENST00000517940 NBPF14Q5TI25 921 aa15.38■□□□□ 0.05
AP3B1-203ENST00000517940 NBPF10Q6P3W6 841 aaKnown RBP15.38■□□□□ 0.05
AP3B1-203ENST00000517940 NBPF15Q8N660 670 aa15.38■□□□□ 0.05
AP3B1-203ENST00000517940 ZBTB1Q9Y2K1 713 aa15.38■□□□□ 0.05
AP3B1-203ENST00000517940 SRCAPQ6ZRS2 3230 aa15.38■□□□□ 0.05
AP3B1-203ENST00000517940 PIP4K2AP48426 406 aaPredicted RBP15.37■□□□□ 0.05
AP3B1-203ENST00000517940 PROSER3Q2NL68 480 aa15.37■□□□□ 0.05
AP3B1-203ENST00000517940 YTHDC1Q96MU7 727 aaKnown RBP15.37■□□□□ 0.05
AP3B1-203ENST00000517940 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
AP3B1-203ENST00000517940 A1BGP04217 495 aa15.36■□□□□ 0.05
AP3B1-203ENST00000517940 PDGFDQ9GZP0 370 aaPredicted RBP15.36■□□□□ 0.05
AP3B1-203ENST00000517940 MYH16Q9H6N6 1097 aa15.36■□□□□ 0.05
AP3B1-203ENST00000517940 BCORQ6W2J9 1755 aa15.35■□□□□ 0.05
AP3B1-203ENST00000517940 VAMP4O75379 141 aa15.35■□□□□ 0.05
AP3B1-203ENST00000517940 RC3H1Q5TC82 1133 aaKnown RBP15.35■□□□□ 0.05
AP3B1-203ENST00000517940 SOS1Q07889 1333 aaPredicted RBP15.35■□□□□ 0.05
AP3B1-203ENST00000517940 SCN7AQ01118 1682 aa15.35■□□□□ 0.05
AP3B1-203ENST00000517940 HOXB7P09629 217 aa15.34■□□□□ 0.05
AP3B1-203ENST00000517940 CCDC87Q9NVE4 849 aa15.34■□□□□ 0.05
AP3B1-203ENST00000517940 PNPLA7Q6ZV29 1317 aa15.34■□□□□ 0.05
AP3B1-203ENST00000517940 ANXA1P04083 346 aa15.33■□□□□ 0.04
AP3B1-203ENST00000517940 SLC15A2Q16348 729 aa15.33■□□□□ 0.04
AP3B1-203ENST00000517940 TWISTNBQ3B726 338 aaPredicted RBP15.33■□□□□ 0.04
AP3B1-203ENST00000517940 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
AP3B1-203ENST00000517940 COL24A1Q17RW2 1714 aa15.33■□□□□ 0.04
AP3B1-203ENST00000517940 EIF5P55010 431 aaKnown RBP15.32■□□□□ 0.04
AP3B1-203ENST00000517940 CACNA1FO60840 1977 aa15.31■□□□□ 0.04
AP3B1-203ENST00000517940 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
AP3B1-203ENST00000517940 GNPATO15228 680 aa15.31■□□□□ 0.04
AP3B1-203ENST00000517940 RPS6KA4O75676 772 aa15.31■□□□□ 0.04
AP3B1-203ENST00000517940 EIF2S2P20042 333 aaKnown RBP15.31■□□□□ 0.04
AP3B1-203ENST00000517940 HDGFL1Q5TGJ6 251 aa15.31■□□□□ 0.04
AP3B1-203ENST00000517940 TEX13AQ9BXU3 409 aaPredicted RBP15.31■□□□□ 0.04
AP3B1-203ENST00000517940 CHPF2Q9P2E5 772 aa15.31■□□□□ 0.04
AP3B1-203ENST00000517940 STARD3NLO95772 234 aa15.3■□□□□ 0.04
AP3B1-203ENST00000517940 COL15A1P39059 1388 aa15.3■□□□□ 0.04
AP3B1-203ENST00000517940 COL23A1Q86Y22 540 aaPredicted RBP15.3■□□□□ 0.04
AP3B1-203ENST00000517940 ERBB4Q15303 1308 aa15.29■□□□□ 0.04
AP3B1-203ENST00000517940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.29■□□□□ 0.04
AP3B1-203ENST00000517940 CANXP27824 592 aaKnown RBP15.29■□□□□ 0.04
AP3B1-203ENST00000517940 AK7Q96M32 723 aa15.29■□□□□ 0.04
AP3B1-203ENST00000517940 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
AP3B1-203ENST00000517940 SSFA2P28290 1259 aa15.28■□□□□ 0.04
AP3B1-203ENST00000517940 IL6STP40189 918 aaPredicted RBP15.28■□□□□ 0.04
AP3B1-203ENST00000517940 R3HDM1Q15032 1099 aaKnown RBP15.28■□□□□ 0.04
AP3B1-203ENST00000517940 G2E3Q7L622 706 aa15.28■□□□□ 0.04
AP3B1-203ENST00000517940 BCL2L12Q9HB09 334 aa15.28■□□□□ 0.04
AP3B1-203ENST00000517940 STK32BQ9NY57 414 aa15.28■□□□□ 0.04
AP3B1-203ENST00000517940 ARFGEF2Q9Y6D5 1785 aa15.28■□□□□ 0.04
AP3B1-203ENST00000517940 NUP98P52948 1817 aa15.27■□□□□ 0.04
AP3B1-203ENST00000517940 PHF14O94880 888 aa15.27■□□□□ 0.04
AP3B1-203ENST00000517940 MYL6BP14649 208 aa15.27■□□□□ 0.04
AP3B1-203ENST00000517940 TTLL7Q6ZT98 887 aa15.27■□□□□ 0.04
AP3B1-203ENST00000517940 ARHGEF1Q92888 912 aaKnown RBP15.27■□□□□ 0.04
AP3B1-203ENST00000517940 DDX21Q9NR30 783 aaKnown RBP eCLIP15.27■□□□□ 0.04
AP3B1-203ENST00000517940 SRP68Q9UHB9 627 aaKnown RBP15.27■□□□□ 0.04
AP3B1-203ENST00000517940 SSH1Q8WYL5 1049 aa15.26■□□□□ 0.03
AP3B1-203ENST00000517940 PHAXQ9H814 394 aaKnown RBP15.26■□□□□ 0.03
AP3B1-203ENST00000517940 TFCP2L1Q9NZI6 479 aa15.26■□□□□ 0.03
AP3B1-203ENST00000517940 RTCBQ9Y3I0 505 aaKnown RBP15.26■□□□□ 0.03
AP3B1-203ENST00000517940 USP42Q9H9J4 1324 aaKnown RBP15.25■□□□□ 0.03
AP3B1-203ENST00000517940 CAMTA2O94983 1202 aa15.25■□□□□ 0.03
AP3B1-203ENST00000517940 ANKRD36CQ5JPF3 1778 aa15.25■□□□□ 0.03
AP3B1-203ENST00000517940 ADRA2BP18089 450 aa15.24■□□□□ 0.03
AP3B1-203ENST00000517940 RARSP54136 660 aaKnown RBP15.24■□□□□ 0.03
AP3B1-203ENST00000517940 CCDC30Q5VVM6 783 aa15.24■□□□□ 0.03
AP3B1-203ENST00000517940 MRPL50Q8N5N7 158 aaKnown RBP15.24■□□□□ 0.03
AP3B1-203ENST00000517940 XAGE3Q8WTP9 111 aa15.24■□□□□ 0.03
AP3B1-203ENST00000517940 BCL2L13Q9BXK5 485 aa15.24■□□□□ 0.03
AP3B1-203ENST00000517940 DBF4Q9UBU7 674 aaPredicted RBP15.24■□□□□ 0.03
AP3B1-203ENST00000517940 ADCY9O60503 1353 aa15.24■□□□□ 0.03
AP3B1-203ENST00000517940 GYS1P13807 737 aa15.23■□□□□ 0.03
AP3B1-203ENST00000517940 HLFQ16534 295 aa15.23■□□□□ 0.03
AP3B1-203ENST00000517940 TBC1D2BQ9UPU7 963 aa15.23■□□□□ 0.03
AP3B1-203ENST00000517940 N4BP2Q86UW6 1770 aaPredicted RBP15.22■□□□□ 0.03
AP3B1-203ENST00000517940 CT47B1P0C2W7 299 aaPredicted RBP15.22■□□□□ 0.03
AP3B1-203ENST00000517940 COPS6Q7L5N1 327 aa15.22■□□□□ 0.03
AP3B1-203ENST00000517940 NARFQ9UHQ1 456 aa15.22■□□□□ 0.03
AP3B1-203ENST00000517940 ZNF330Q9Y3S2 320 aaPredicted RBP15.22■□□□□ 0.03
AP3B1-203ENST00000517940 NRXN2Q9P2S2 1712 aa15.21■□□□□ 0.03
AP3B1-203ENST00000517940 BCAR3O75815 825 aa15.21■□□□□ 0.03
AP3B1-203ENST00000517940 SLC4A2P04920 1241 aa15.21■□□□□ 0.03
AP3B1-203ENST00000517940 FKBP8Q14318 412 aa15.21■□□□□ 0.03
AP3B1-203ENST00000517940 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
AP3B1-203ENST00000517940 USPL1Q5W0Q7 1092 aa15.21■□□□□ 0.03
AP3B1-203ENST00000517940 DZIP3Q86Y13 1208 aaKnown RBP15.21■□□□□ 0.03
AP3B1-203ENST00000517940 AFDNP55196 1824 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms