RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 CNGB1Q14028 1251 aaPredicted RBP20.65■□□□□ 0.9
CSGALNACT1-204ENST00000517494 HTRA3P83110 453 aa20.64■□□□□ 0.89
CSGALNACT1-204ENST00000517494 RASSF7Q02833 373 aa20.64■□□□□ 0.89
CSGALNACT1-204ENST00000517494 NFIXQ14938 502 aa20.64■□□□□ 0.89
CSGALNACT1-204ENST00000517494 MTHFSDQ2M296 383 aaKnown RBP20.64■□□□□ 0.89
CSGALNACT1-204ENST00000517494 CC2D1BQ5T0F9 858 aaKnown RBP20.64■□□□□ 0.89
CSGALNACT1-204ENST00000517494 RRAGCQ9HB90 399 aa20.64■□□□□ 0.89
CSGALNACT1-204ENST00000517494 NARFQ9UHQ1 456 aa20.64■□□□□ 0.89
CSGALNACT1-204ENST00000517494 ARFGEF1Q9Y6D6 1849 aa20.63■□□□□ 0.89
CSGALNACT1-204ENST00000517494 CANXP27824 592 aaKnown RBP20.63■□□□□ 0.89
CSGALNACT1-204ENST00000517494 MRC1P22897 1456 aa20.62■□□□□ 0.89
CSGALNACT1-204ENST00000517494 DIAPH1O60610 1272 aaKnown RBP20.62■□□□□ 0.89
CSGALNACT1-204ENST00000517494 BICDL1Q6ZP65 573 aa20.62■□□□□ 0.89
CSGALNACT1-204ENST00000517494 DNAJC5GQ8N7S2 189 aa20.62■□□□□ 0.89
CSGALNACT1-204ENST00000517494 KIF7Q2M1P5 1343 aa20.61■□□□□ 0.89
CSGALNACT1-204ENST00000517494 SERPINB2P05120 415 aa20.61■□□□□ 0.89
CSGALNACT1-204ENST00000517494 TTC5Q8N0Z6 440 aa20.61■□□□□ 0.89
CSGALNACT1-204ENST00000517494 ADAMTS7Q9UKP4 1686 aa20.61■□□□□ 0.89
CSGALNACT1-204ENST00000517494 FSTL1Q12841 308 aa20.6■□□□□ 0.89
CSGALNACT1-204ENST00000517494 C2CD5Q86YS7 1000 aa20.6■□□□□ 0.89
CSGALNACT1-204ENST00000517494 ZNF330Q9Y3S2 320 aaPredicted RBP20.6■□□□□ 0.89
CSGALNACT1-204ENST00000517494 BCL2L12Q9HB09 334 aa20.59■□□□□ 0.89
CSGALNACT1-204ENST00000517494 U2SURPO15042 1029 aaKnown RBP20.58■□□□□ 0.89
CSGALNACT1-204ENST00000517494 STARD3NLO95772 234 aa20.57■□□□□ 0.88
CSGALNACT1-204ENST00000517494 VSIG10Q8N0Z9 540 aa20.57■□□□□ 0.88
CSGALNACT1-204ENST00000517494 TTLL6Q8N841 843 aa20.57■□□□□ 0.88
CSGALNACT1-204ENST00000517494 CARMIL3Q8ND23 1372 aa20.57■□□□□ 0.88
CSGALNACT1-204ENST00000517494 WDR90Q96KV7 1748 aa20.56■□□□□ 0.88
CSGALNACT1-204ENST00000517494 H0YIN7 160 aa20.56■□□□□ 0.88
CSGALNACT1-204ENST00000517494 LMNB1P20700 586 aa20.56■□□□□ 0.88
CSGALNACT1-204ENST00000517494 KLRG1Q96E93 195 aa20.56■□□□□ 0.88
CSGALNACT1-204ENST00000517494 TEFQ10587 303 aa20.55■□□□□ 0.88
CSGALNACT1-204ENST00000517494 SMC1BQ8NDV3 1235 aa20.55■□□□□ 0.88
CSGALNACT1-204ENST00000517494 A0A087WZG4 1122 aa20.54■□□□□ 0.88
CSGALNACT1-204ENST00000517494 ZNF219Q9P2Y4 722 aaPredicted RBP20.54■□□□□ 0.88
CSGALNACT1-204ENST00000517494 CCDC24Q8N4L8 307 aa20.53■□□□□ 0.88
CSGALNACT1-204ENST00000517494 ZNF622Q969S3 477 aaKnown RBP eCLIP20.53■□□□□ 0.88
CSGALNACT1-204ENST00000517494 ZNF496Q96IT1 587 aaPredicted RBP20.53■□□□□ 0.88
CSGALNACT1-204ENST00000517494 TNRC6CQ9HCJ0 1690 aaKnown RBP20.53■□□□□ 0.88
CSGALNACT1-204ENST00000517494 ZC3H4Q9UPT8 1303 aaKnown RBP20.53■□□□□ 0.88
CSGALNACT1-204ENST00000517494 NPHP1O15259 732 aa20.52■□□□□ 0.88
CSGALNACT1-204ENST00000517494 PRELPP51888 382 aa20.52■□□□□ 0.88
CSGALNACT1-204ENST00000517494 EIF5P55010 431 aaKnown RBP20.52■□□□□ 0.88
CSGALNACT1-204ENST00000517494 TBC1D9BQ66K14 1250 aa20.52■□□□□ 0.88
CSGALNACT1-204ENST00000517494 NPM2Q86SE8 214 aaKnown RBP20.52■□□□□ 0.88
CSGALNACT1-204ENST00000517494 TBC1D2BQ9UPU7 963 aa20.52■□□□□ 0.88
CSGALNACT1-204ENST00000517494 AFDNP55196 1824 aaKnown RBP20.52■□□□□ 0.88
CSGALNACT1-204ENST00000517494 GLTPD2A6NH11 291 aa20.51■□□□□ 0.87
CSGALNACT1-204ENST00000517494 GNAT3A8MTJ3 354 aa20.51■□□□□ 0.87
CSGALNACT1-204ENST00000517494 GAS2L2Q8NHY3 880 aa20.51■□□□□ 0.87
CSGALNACT1-204ENST00000517494 NRXN2Q9P2S2 1712 aa20.5■□□□□ 0.87
CSGALNACT1-204ENST00000517494 HEG1Q9ULI3 1381 aa20.5■□□□□ 0.87
CSGALNACT1-204ENST00000517494 NFKBIEO00221 500 aa20.5■□□□□ 0.87
CSGALNACT1-204ENST00000517494 PER1O15534 1290 aaPredicted RBP20.5■□□□□ 0.87
CSGALNACT1-204ENST00000517494 VEGFAP15692 232 aaPredicted RBP20.5■□□□□ 0.87
CSGALNACT1-204ENST00000517494 ZNF790Q6PG37 636 aa20.5■□□□□ 0.87
CSGALNACT1-204ENST00000517494 IL17REQ8NFR9 667 aa20.49■□□□□ 0.87
CSGALNACT1-204ENST00000517494 SBF1O95248 1867 aa20.49■□□□□ 0.87
CSGALNACT1-204ENST00000517494 C21orf2O43822 256 aa20.48■□□□□ 0.87
CSGALNACT1-204ENST00000517494 TEX13AQ9BXU3 409 aaPredicted RBP20.48■□□□□ 0.87
CSGALNACT1-204ENST00000517494 VIRMAQ69YN4 1812 aaKnown RBP20.48■□□□□ 0.87
CSGALNACT1-204ENST00000517494 UBR2Q8IWV8 1755 aa20.47■□□□□ 0.87
CSGALNACT1-204ENST00000517494 PDE6BP35913 854 aa20.47■□□□□ 0.87
CSGALNACT1-204ENST00000517494 PRR5LQ6MZQ0 368 aa20.47■□□□□ 0.87
CSGALNACT1-204ENST00000517494 JMYQ8N9B5 988 aa20.47■□□□□ 0.87
CSGALNACT1-204ENST00000517494 FMNL2Q96PY5 1086 aa20.47■□□□□ 0.87
CSGALNACT1-204ENST00000517494 COL3A1P02461 1466 aaPredicted RBP20.47■□□□□ 0.87
CSGALNACT1-204ENST00000517494 A1BGP04217 495 aa20.46■□□□□ 0.87
CSGALNACT1-204ENST00000517494 CNBD1Q8NA66 436 aa20.46■□□□□ 0.87
CSGALNACT1-204ENST00000517494 BRIP1Q9BX63 1249 aa20.46■□□□□ 0.87
CSGALNACT1-204ENST00000517494 DLEC1Q9Y238 1755 aa20.46■□□□□ 0.87
CSGALNACT1-204ENST00000517494 IL6STP40189 918 aaPredicted RBP20.45■□□□□ 0.86
CSGALNACT1-204ENST00000517494 ERFEQ4G0M1 354 aa20.45■□□□□ 0.86
CSGALNACT1-204ENST00000517494 COL13A1Q5TAT6 717 aaPredicted RBP20.45■□□□□ 0.86
CSGALNACT1-204ENST00000517494 DPY19L2Q6NUT2 758 aa20.45■□□□□ 0.86
CSGALNACT1-204ENST00000517494 SETDB2Q96T68 719 aa20.45■□□□□ 0.86
CSGALNACT1-204ENST00000517494 TIAM2Q8IVF5 1701 aa20.44■□□□□ 0.86
CSGALNACT1-204ENST00000517494 BTBD11A6QL63 1104 aa20.44■□□□□ 0.86
CSGALNACT1-204ENST00000517494 KCNQ3O43525 872 aa20.44■□□□□ 0.86
CSGALNACT1-204ENST00000517494 PIP4K2AP48426 406 aaPredicted RBP20.44■□□□□ 0.86
CSGALNACT1-204ENST00000517494 ST5P78524 1137 aa20.44■□□□□ 0.86
CSGALNACT1-204ENST00000517494 PDZRN3Q9UPQ7 1066 aa20.44■□□□□ 0.86
CSGALNACT1-204ENST00000517494 SCN7AQ01118 1682 aa20.43■□□□□ 0.86
CSGALNACT1-204ENST00000517494 CAPN15O75808 1086 aa20.43■□□□□ 0.86
CSGALNACT1-204ENST00000517494 PRKAR2BP31323 418 aa20.43■□□□□ 0.86
CSGALNACT1-204ENST00000517494 DZIP3Q86Y13 1208 aaKnown RBP20.42■□□□□ 0.86
CSGALNACT1-204ENST00000517494 CFAP53Q96M91 514 aa20.42■□□□□ 0.86
CSGALNACT1-204ENST00000517494 TAOK3Q9H2K8 898 aa20.42■□□□□ 0.86
CSGALNACT1-204ENST00000517494 CAMTA2O94983 1202 aa20.41■□□□□ 0.86
CSGALNACT1-204ENST00000517494 PHACTR3Q96KR7 559 aa20.41■□□□□ 0.86
CSGALNACT1-204ENST00000517494 PRPF40BQ6NWY9 871 aaKnown RBP20.4■□□□□ 0.86
CSGALNACT1-204ENST00000517494 CNKSR1Q969H4 720 aa20.4■□□□□ 0.86
CSGALNACT1-204ENST00000517494 NPC1L1Q9UHC9 1359 aa20.4■□□□□ 0.86
CSGALNACT1-204ENST00000517494 ANKRD31Q8N7Z5 1873 aa20.39■□□□□ 0.86
CSGALNACT1-204ENST00000517494 COL11A2P13942 1736 aaPredicted RBP20.39■□□□□ 0.86
CSGALNACT1-204ENST00000517494 CEMIPQ8WUJ3 1361 aa20.39■□□□□ 0.85
CSGALNACT1-204ENST00000517494 TNS4Q8IZW8 715 aa20.39■□□□□ 0.85
CSGALNACT1-204ENST00000517494 PRAMEF22A3QJZ6 481 aa20.38■□□□□ 0.85
CSGALNACT1-204ENST00000517494 POTECB2RU33 542 aa20.38■□□□□ 0.85
CSGALNACT1-204ENST00000517494 NBPF5PQ86XG9 351 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms