RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 LMOD3Q0VAK6 560 aa9.39□□□□□ -0.91
SCARNA18.2-201ENST00000516882 DCTN1Q14203 1278 aa9.39□□□□□ -0.91
SCARNA18.2-201ENST00000516882 TAF7Q15545 349 aaPredicted RBP9.39□□□□□ -0.91
SCARNA18.2-201ENST00000516882 NFE2L2Q16236 605 aa9.39□□□□□ -0.91
SCARNA18.2-201ENST00000516882 INTS5Q6P9B9 1019 aaKnown RBP9.39□□□□□ -0.91
SCARNA18.2-201ENST00000516882 PNISRQ8TF01 805 aaKnown RBP9.39□□□□□ -0.91
SCARNA18.2-201ENST00000516882 ZNF496Q96IT1 587 aaPredicted RBP9.39□□□□□ -0.91
SCARNA18.2-201ENST00000516882 PLEKHF1Q96S99 279 aa9.39□□□□□ -0.91
SCARNA18.2-201ENST00000516882 PARP3Q9Y6F1 533 aa9.39□□□□□ -0.91
SCARNA18.2-201ENST00000516882 COL15A1P39059 1388 aa9.38□□□□□ -0.91
SCARNA18.2-201ENST00000516882 USP42Q9H9J4 1324 aaKnown RBP9.38□□□□□ -0.91
SCARNA18.2-201ENST00000516882 A0A087WZG4 1122 aa9.38□□□□□ -0.91
SCARNA18.2-201ENST00000516882 SNRPA1P09661 255 aaKnown RBP9.38□□□□□ -0.91
SCARNA18.2-201ENST00000516882 GYS1P13807 737 aa9.38□□□□□ -0.91
SCARNA18.2-201ENST00000516882 YY1P25490 414 aa9.38□□□□□ -0.91
SCARNA18.2-201ENST00000516882 CANXP27824 592 aaKnown RBP9.38□□□□□ -0.91
SCARNA18.2-201ENST00000516882 RIPK4P57078 832 aa9.38□□□□□ -0.91
SCARNA18.2-201ENST00000516882 ZBTB1Q9Y2K1 713 aa9.38□□□□□ -0.91
SCARNA18.2-201ENST00000516882 ZNF330Q9Y3S2 320 aaPredicted RBP9.38□□□□□ -0.91
SCARNA18.2-201ENST00000516882 SOS1Q07889 1333 aaPredicted RBP9.37□□□□□ -0.91
SCARNA18.2-201ENST00000516882 BRCA1P38398 1863 aaKnown RBP9.37□□□□□ -0.91
SCARNA18.2-201ENST00000516882 GRIN3BO60391 1043 aa9.37□□□□□ -0.91
SCARNA18.2-201ENST00000516882 NLGN2Q8NFZ4 835 aa9.37□□□□□ -0.91
SCARNA18.2-201ENST00000516882 NUP98P52948 1817 aa9.36□□□□□ -0.91
SCARNA18.2-201ENST00000516882 ANP32CO43423 234 aa9.36□□□□□ -0.91
SCARNA18.2-201ENST00000516882 USPL1Q5W0Q7 1092 aa9.36□□□□□ -0.91
SCARNA18.2-201ENST00000516882 RUNDC1Q96C34 613 aa9.36□□□□□ -0.91
SCARNA18.2-201ENST00000516882 SRP68Q9UHB9 627 aaKnown RBP9.36□□□□□ -0.91
SCARNA18.2-201ENST00000516882 NARFQ9UHQ1 456 aa9.36□□□□□ -0.91
SCARNA18.2-201ENST00000516882 ARFGEF1Q9Y6D6 1849 aa9.35□□□□□ -0.91
SCARNA18.2-201ENST00000516882 BCORQ6W2J9 1755 aa9.35□□□□□ -0.91
SCARNA18.2-201ENST00000516882 KCNQ3O43525 872 aa9.35□□□□□ -0.91
SCARNA18.2-201ENST00000516882 IL6STP40189 918 aaPredicted RBP9.35□□□□□ -0.91
SCARNA18.2-201ENST00000516882 TMPOP42166 694 aaKnown RBP9.35□□□□□ -0.91
SCARNA18.2-201ENST00000516882 TGFB2P61812 414 aa9.35□□□□□ -0.91
SCARNA18.2-201ENST00000516882 FKBP8Q14318 412 aa9.35□□□□□ -0.91
SCARNA18.2-201ENST00000516882 NEUROD2Q15784 382 aa9.35□□□□□ -0.91
SCARNA18.2-201ENST00000516882 CCDC146Q8IYE0 955 aa9.35□□□□□ -0.91
SCARNA18.2-201ENST00000516882 SCN7AQ01118 1682 aa9.35□□□□□ -0.91
SCARNA18.2-201ENST00000516882 CACNA1SQ13698 1873 aa9.34□□□□□ -0.91
SCARNA18.2-201ENST00000516882 CCDC88AQ3V6T2 1871 aa9.34□□□□□ -0.91
SCARNA18.2-201ENST00000516882 NPHP1O15259 732 aa9.34□□□□□ -0.91
SCARNA18.2-201ENST00000516882 A1BGP04217 495 aa9.34□□□□□ -0.91
SCARNA18.2-201ENST00000516882 EIF5P55010 431 aaKnown RBP9.34□□□□□ -0.91
SCARNA18.2-201ENST00000516882 MIS18AQ9NYP9 233 aa9.34□□□□□ -0.91
SCARNA18.2-201ENST00000516882 TSPYL4Q9UJ04 414 aa9.34□□□□□ -0.91
SCARNA18.2-201ENST00000516882 ADAMTS8Q9UP79 889 aa9.34□□□□□ -0.91
SCARNA18.2-201ENST00000516882 USP16Q9Y5T5 823 aa9.34□□□□□ -0.91
SCARNA18.2-201ENST00000516882 GOLGB1Q14789 3259 aaKnown RBP9.34□□□□□ -0.91
SCARNA18.2-201ENST00000516882 THUMPD2Q9BTF0 503 aaKnown RBP9.33□□□□□ -0.92
SCARNA18.2-201ENST00000516882 BABAM1Q9NWV8 329 aa9.33□□□□□ -0.92
SCARNA18.2-201ENST00000516882 TBC1D2BQ9UPU7 963 aa9.33□□□□□ -0.92
SCARNA18.2-201ENST00000516882 ZNF652Q9Y2D9 606 aa9.33□□□□□ -0.92
SCARNA18.2-201ENST00000516882 UTRNP46939 3433 aa9.33□□□□□ -0.92
SCARNA18.2-201ENST00000516882 KIAA1551Q9HCM1 1747 aa9.33□□□□□ -0.92
SCARNA18.2-201ENST00000516882 NRXN2Q9P2S2 1712 aa9.33□□□□□ -0.92
SCARNA18.2-201ENST00000516882 DLEC1Q9Y238 1755 aa9.32□□□□□ -0.92
SCARNA18.2-201ENST00000516882 C10orf71Q711Q0 1435 aa9.32□□□□□ -0.92
SCARNA18.2-201ENST00000516882 POLRMTO00411 1230 aaKnown RBP9.32□□□□□ -0.92
SCARNA18.2-201ENST00000516882 TM4SF1P30408 202 aa9.32□□□□□ -0.92
SCARNA18.2-201ENST00000516882 BICDL1Q6ZP65 573 aa9.32□□□□□ -0.92
SCARNA18.2-201ENST00000516882 DZIP3Q86Y13 1208 aaKnown RBP9.32□□□□□ -0.92
SCARNA18.2-201ENST00000516882 RRP7AQ9Y3A4 280 aaKnown RBP9.32□□□□□ -0.92
SCARNA18.2-201ENST00000516882 CACNA1FO60840 1977 aa9.32□□□□□ -0.92
SCARNA18.2-201ENST00000516882 PRAMEF22A3QJZ6 481 aa9.31□□□□□ -0.92
SCARNA18.2-201ENST00000516882 GIGYF1O75420 1035 aaPredicted RBP9.31□□□□□ -0.92
SCARNA18.2-201ENST00000516882 SERPINB2P05120 415 aa9.31□□□□□ -0.92
SCARNA18.2-201ENST00000516882 YBX3P16989 372 aaKnown RBP eCLIP9.31□□□□□ -0.92
SCARNA18.2-201ENST00000516882 EIF4A1P60842 406 aaKnown RBP9.31□□□□□ -0.92
SCARNA18.2-201ENST00000516882 DDR1Q08345 913 aa9.31□□□□□ -0.92
SCARNA18.2-201ENST00000516882 NFIXQ14938 502 aa9.31□□□□□ -0.92
SCARNA18.2-201ENST00000516882 SETDB2Q96T68 719 aa9.31□□□□□ -0.92
SCARNA18.2-201ENST00000516882 WWC3Q9ULE0 1092 aa9.31□□□□□ -0.92
SCARNA18.2-201ENST00000516882 LAS1LQ9Y4W2 734 aaKnown RBP9.31□□□□□ -0.92
SCARNA18.2-201ENST00000516882 SBF1O95248 1867 aa9.31□□□□□ -0.92
SCARNA18.2-201ENST00000516882 ANKRD31Q8N7Z5 1873 aa9.3□□□□□ -0.92
SCARNA18.2-201ENST00000516882 PXDNLA1KZ92 1463 aa9.3□□□□□ -0.92
SCARNA18.2-201ENST00000516882 CARMIL3Q8ND23 1372 aa9.3□□□□□ -0.92
SCARNA18.2-201ENST00000516882 A0A0G2JLW4 131 aa9.3□□□□□ -0.92
SCARNA18.2-201ENST00000516882 PIP4K2AP48426 406 aaPredicted RBP9.3□□□□□ -0.92
SCARNA18.2-201ENST00000516882 CALD1Q05682 793 aaKnown RBP9.3□□□□□ -0.92
SCARNA18.2-201ENST00000516882 CLEC4GQ6UXB4 293 aa9.3□□□□□ -0.92
SCARNA18.2-201ENST00000516882 PIM2Q9P1W9 311 aa9.3□□□□□ -0.92
SCARNA18.2-201ENST00000516882 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
SCARNA18.2-201ENST00000516882 DPEP1P16444 411 aa9.29□□□□□ -0.92
SCARNA18.2-201ENST00000516882 ST5P78524 1137 aa9.29□□□□□ -0.92
SCARNA18.2-201ENST00000516882 TBC1D9BQ66K14 1250 aa9.29□□□□□ -0.92
SCARNA18.2-201ENST00000516882 KIF6Q6ZMV9 814 aa9.29□□□□□ -0.92
SCARNA18.2-201ENST00000516882 NGEFQ8N5V2 710 aa9.29□□□□□ -0.92
SCARNA18.2-201ENST00000516882 BCL2L12Q9HB09 334 aa9.29□□□□□ -0.92
SCARNA18.2-201ENST00000516882 MRS2Q9HD23 443 aa9.29□□□□□ -0.92
SCARNA18.2-201ENST00000516882 PDZRN3Q9UPQ7 1066 aa9.29□□□□□ -0.92
SCARNA18.2-201ENST00000516882 ERBB4Q15303 1308 aa9.29□□□□□ -0.92
SCARNA18.2-201ENST00000516882 ANKRD36CQ5JPF3 1778 aa9.28□□□□□ -0.92
SCARNA18.2-201ENST00000516882 H0YIN7 160 aa9.28□□□□□ -0.92
SCARNA18.2-201ENST00000516882 APAF1O14727 1248 aa9.28□□□□□ -0.92
SCARNA18.2-201ENST00000516882 RGL2O15211 777 aa9.28□□□□□ -0.92
SCARNA18.2-201ENST00000516882 CAMTA2O94983 1202 aa9.28□□□□□ -0.92
SCARNA18.2-201ENST00000516882 MYL6BP14649 208 aa9.28□□□□□ -0.92
SCARNA18.2-201ENST00000516882 EIF2S2P20042 333 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms