RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 ARHGEF1Q92888 912 aaKnown RBP7.94□□□□□ -1.14
SCARNA18.1-201ENST00000516330 PHACTR3Q96KR7 559 aa7.94□□□□□ -1.14
SCARNA18.1-201ENST00000516330 PLEKHF1Q96S99 279 aa7.94□□□□□ -1.14
SCARNA18.1-201ENST00000516330 PRKRIP1Q9H875 184 aaPredicted RBP7.94□□□□□ -1.14
SCARNA18.1-201ENST00000516330 A0A087WZG4 1122 aa7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 MMP10P09238 476 aa7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 IL6STP40189 918 aaPredicted RBP7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 TGFB2P61812 414 aa7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 SLC39A6Q13433 755 aa7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 NFE2L2Q16236 605 aa7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 INTS5Q6P9B9 1019 aaKnown RBP7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 DNAJC10Q8IXB1 793 aa7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 ZNF496Q96IT1 587 aaPredicted RBP7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 BABAM1Q9NWV8 329 aa7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 ZBTB1Q9Y2K1 713 aa7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 GOLGB1Q14789 3259 aaKnown RBP7.93□□□□□ -1.14
SCARNA18.1-201ENST00000516330 ARFGEF2Q9Y6D5 1785 aa7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 AFDNP55196 1824 aaKnown RBP7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 ZPR1O75312 459 aa7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 YY1P25490 414 aa7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 DDX10Q13206 875 aaKnown RBP7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 WDR43Q15061 677 aaKnown RBP eCLIP7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 NPM2Q86SE8 214 aaKnown RBP7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 KLHL34Q8N239 644 aa7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 NLGN2Q8NFZ4 835 aa7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 NARFQ9UHQ1 456 aa7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 PARP3Q9Y6F1 533 aa7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 ERBB4Q15303 1308 aa7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 CARMIL3Q8ND23 1372 aa7.92□□□□□ -1.14
SCARNA18.1-201ENST00000516330 SNRPA1P09661 255 aaKnown RBP7.91□□□□□ -1.14
SCARNA18.1-201ENST00000516330 EIF5P55010 431 aaKnown RBP7.91□□□□□ -1.14
SCARNA18.1-201ENST00000516330 TAF7Q15545 349 aaPredicted RBP7.91□□□□□ -1.14
SCARNA18.1-201ENST00000516330 ADCY9O60503 1353 aa7.91□□□□□ -1.14
SCARNA18.1-201ENST00000516330 N4BP2Q86UW6 1770 aaPredicted RBP7.91□□□□□ -1.14
SCARNA18.1-201ENST00000516330 RIC1Q4ADV7 1423 aa7.9□□□□□ -1.14
SCARNA18.1-201ENST00000516330 ATP10DQ9P241 1426 aa7.9□□□□□ -1.14
SCARNA18.1-201ENST00000516330 IBTKQ9P2D0 1353 aaPredicted RBP7.9□□□□□ -1.14
SCARNA18.1-201ENST00000516330 GPR162Q16538 588 aa7.9□□□□□ -1.14
SCARNA18.1-201ENST00000516330 MCM10Q7L590 875 aa7.9□□□□□ -1.14
SCARNA18.1-201ENST00000516330 PDZRN3Q9UPQ7 1066 aa7.9□□□□□ -1.14
SCARNA18.1-201ENST00000516330 ZNF652Q9Y2D9 606 aa7.9□□□□□ -1.14
SCARNA18.1-201ENST00000516330 COL11A2P13942 1736 aaPredicted RBP7.89□□□□□ -1.15
SCARNA18.1-201ENST00000516330 POLRMTO00411 1230 aaKnown RBP7.89□□□□□ -1.15
SCARNA18.1-201ENST00000516330 USPL1Q5W0Q7 1092 aa7.89□□□□□ -1.15
SCARNA18.1-201ENST00000516330 CLEC4GQ6UXB4 293 aa7.89□□□□□ -1.15
SCARNA18.1-201ENST00000516330 RUNDC1Q96C34 613 aa7.89□□□□□ -1.15
SCARNA18.1-201ENST00000516330 ANKRD36CQ5JPF3 1778 aa7.89□□□□□ -1.15
SCARNA18.1-201ENST00000516330 ANKRD31Q8N7Z5 1873 aa7.88□□□□□ -1.15
SCARNA18.1-201ENST00000516330 TM4SF1P30408 202 aa7.88□□□□□ -1.15
SCARNA18.1-201ENST00000516330 TMPOP42166 694 aaKnown RBP7.88□□□□□ -1.15
SCARNA18.1-201ENST00000516330 CALD1Q05682 793 aaKnown RBP7.88□□□□□ -1.15
SCARNA18.1-201ENST00000516330 DDR1Q08345 913 aa7.88□□□□□ -1.15
SCARNA18.1-201ENST00000516330 FKBP8Q14318 412 aa7.88□□□□□ -1.15
SCARNA18.1-201ENST00000516330 SRP68Q9UHB9 627 aaKnown RBP7.88□□□□□ -1.15
SCARNA18.1-201ENST00000516330 ZC3H4Q9UPT8 1303 aaKnown RBP7.87□□□□□ -1.15
SCARNA18.1-201ENST00000516330 HOXB7P09629 217 aa7.87□□□□□ -1.15
SCARNA18.1-201ENST00000516330 YBX3P16989 372 aaKnown RBP eCLIP7.87□□□□□ -1.15
SCARNA18.1-201ENST00000516330 CANXP27824 592 aaKnown RBP7.87□□□□□ -1.15
SCARNA18.1-201ENST00000516330 DCTN1Q14203 1278 aa7.87□□□□□ -1.15
SCARNA18.1-201ENST00000516330 NCBP3Q53F19 620 aaKnown RBP7.87□□□□□ -1.15
SCARNA18.1-201ENST00000516330 SMIM5Q71RC9 77 aa7.87□□□□□ -1.15
SCARNA18.1-201ENST00000516330 DZIP3Q86Y13 1208 aaKnown RBP7.87□□□□□ -1.15
SCARNA18.1-201ENST00000516330 TNRC6CQ9HCJ0 1690 aaKnown RBP7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 RNF123Q5XPI4 1314 aa7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 ZNF316A6NFI3 1004 aaPredicted RBP7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 GIGYF1O75420 1035 aaPredicted RBP7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 CAMTA2O94983 1202 aa7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 RIPK4P57078 832 aa7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 EIF4A1P60842 406 aaKnown RBP7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 NFIXQ14938 502 aa7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 PELP1Q8IZL8 1130 aaKnown RBP7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 BCL2L12Q9HB09 334 aa7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 TSPYL4Q9UJ04 414 aa7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 TIAM2Q8IVF5 1701 aa7.86□□□□□ -1.15
SCARNA18.1-201ENST00000516330 ERVV-1B6SEH8 477 aa7.85□□□□□ -1.15
SCARNA18.1-201ENST00000516330 SERPINB2P05120 415 aa7.85□□□□□ -1.15
SCARNA18.1-201ENST00000516330 ST5P78524 1137 aa7.85□□□□□ -1.15
SCARNA18.1-201ENST00000516330 CNBD1Q8NA66 436 aa7.85□□□□□ -1.15
SCARNA18.1-201ENST00000516330 CHMP4AQ9BY43 222 aa7.85□□□□□ -1.15
SCARNA18.1-201ENST00000516330 PIM2Q9P1W9 311 aa7.85□□□□□ -1.15
SCARNA18.1-201ENST00000516330 USP16Q9Y5T5 823 aa7.85□□□□□ -1.15
SCARNA18.1-201ENST00000516330 NUP98P52948 1817 aa7.85□□□□□ -1.15
SCARNA18.1-201ENST00000516330 LAMB2P55268 1798 aa7.84□□□□□ -1.15
SCARNA18.1-201ENST00000516330 ANP32CO43423 234 aa7.84□□□□□ -1.15
SCARNA18.1-201ENST00000516330 KCNQ3O43525 872 aa7.84□□□□□ -1.15
SCARNA18.1-201ENST00000516330 PDE6BP35913 854 aa7.84□□□□□ -1.15
SCARNA18.1-201ENST00000516330 ZNF784Q8NCA9 323 aaPredicted RBP7.84□□□□□ -1.15
SCARNA18.1-201ENST00000516330 SETDB2Q96T68 719 aa7.84□□□□□ -1.15
SCARNA18.1-201ENST00000516330 ZNF330Q9Y3S2 320 aaPredicted RBP7.84□□□□□ -1.15
SCARNA18.1-201ENST00000516330 FER1L6Q2WGJ9 1857 aa7.83□□□□□ -1.16
SCARNA18.1-201ENST00000516330 MAP3K15Q6ZN16 1313 aa7.83□□□□□ -1.16
SCARNA18.1-201ENST00000516330 A1BGP04217 495 aa7.83□□□□□ -1.16
SCARNA18.1-201ENST00000516330 DPEP1P16444 411 aa7.83□□□□□ -1.16
SCARNA18.1-201ENST00000516330 CCDC27Q2M243 656 aa7.83□□□□□ -1.16
SCARNA18.1-201ENST00000516330 DALRD3Q5D0E6 543 aaKnown RBP7.83□□□□□ -1.16
SCARNA18.1-201ENST00000516330 SOGA3Q5TF21 947 aa7.83□□□□□ -1.16
SCARNA18.1-201ENST00000516330 TBC1D9BQ66K14 1250 aa7.83□□□□□ -1.16
SCARNA18.1-201ENST00000516330 PRR5LQ6MZQ0 368 aa7.83□□□□□ -1.16
SCARNA18.1-201ENST00000516330 KIF6Q6ZMV9 814 aa7.83□□□□□ -1.16
SCARNA18.1-201ENST00000516330 NGEFQ8N5V2 710 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms