RNA–Protein interactions for RNA: ENST00000515467.2

SDHAP3-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

BASIC

Gene SDHAP3, Length 728 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-202ENST00000515467 CCER2I3L3R5 266 aa20.79■□□□□ 0.92
SDHAP3-202ENST00000515467 EIF4A1P60842 406 aaKnown RBP20.79■□□□□ 0.92
SDHAP3-202ENST00000515467 FAM9BQ8IZU0 186 aa20.79■□□□□ 0.92
SDHAP3-202ENST00000515467 CICQ96RK0 1608 aaPredicted RBP20.78■□□□□ 0.92
SDHAP3-202ENST00000515467 CHL1O00533 1208 aa20.78■□□□□ 0.92
SDHAP3-202ENST00000515467 DLG5Q8TDM6 1919 aa20.78■□□□□ 0.92
SDHAP3-202ENST00000515467 CCDC27Q2M243 656 aa20.77■□□□□ 0.92
SDHAP3-202ENST00000515467 NPM2Q86SE8 214 aaKnown RBP20.77■□□□□ 0.92
SDHAP3-202ENST00000515467 NLGN1Q8N2Q7 840 aa20.77■□□□□ 0.92
SDHAP3-202ENST00000515467 ARXQ96QS3 562 aa20.77■□□□□ 0.92
SDHAP3-202ENST00000515467 ZBTB1Q9Y2K1 713 aa20.77■□□□□ 0.92
SDHAP3-202ENST00000515467 USP16Q9Y5T5 823 aa20.77■□□□□ 0.92
SDHAP3-202ENST00000515467 UBR2Q8IWV8 1755 aa20.77■□□□□ 0.91
SDHAP3-202ENST00000515467 SOS1Q07889 1333 aaPredicted RBP20.77■□□□□ 0.91
SDHAP3-202ENST00000515467 A0A087WZG4 1122 aa20.76■□□□□ 0.91
SDHAP3-202ENST00000515467 CANXP27824 592 aaKnown RBP20.76■□□□□ 0.91
SDHAP3-202ENST00000515467 CFAP44Q96MT7 982 aa20.76■□□□□ 0.91
SDHAP3-202ENST00000515467 LAS1LQ9Y4W2 734 aaKnown RBP20.76■□□□□ 0.91
SDHAP3-202ENST00000515467 ZPR1O75312 459 aa20.75■□□□□ 0.91
SDHAP3-202ENST00000515467 GIGYF1O75420 1035 aaPredicted RBP20.75■□□□□ 0.91
SDHAP3-202ENST00000515467 MSL1Q68DK7 614 aa20.75■□□□□ 0.91
SDHAP3-202ENST00000515467 NGEFQ8N5V2 710 aa20.75■□□□□ 0.91
SDHAP3-202ENST00000515467 COL5A3P25940 1745 aaPredicted RBP20.75■□□□□ 0.91
SDHAP3-202ENST00000515467 TJP1Q07157 1748 aa20.75■□□□□ 0.91
SDHAP3-202ENST00000515467 UBR3Q6ZT12 1888 aa20.75■□□□□ 0.91
SDHAP3-202ENST00000515467 A1BGP04217 495 aa20.74■□□□□ 0.91
SDHAP3-202ENST00000515467 IL6STP40189 918 aaPredicted RBP20.74■□□□□ 0.91
SDHAP3-202ENST00000515467 EIF5P55010 431 aaKnown RBP20.74■□□□□ 0.91
SDHAP3-202ENST00000515467 GNAI1P63096 354 aa20.74■□□□□ 0.91
SDHAP3-202ENST00000515467 TUBGCP6Q96RT7 1819 aa20.74■□□□□ 0.91
SDHAP3-202ENST00000515467 IFT57Q9NWB7 429 aa20.73■□□□□ 0.91
SDHAP3-202ENST00000515467 PRAMEF22A3QJZ6 481 aa20.72■□□□□ 0.91
SDHAP3-202ENST00000515467 GYS1P13807 737 aa20.72■□□□□ 0.91
SDHAP3-202ENST00000515467 USP42Q9H9J4 1324 aaKnown RBP20.72■□□□□ 0.91
SDHAP3-202ENST00000515467 MYH14Q7Z406 1995 aaKnown RBP20.72■□□□□ 0.91
SDHAP3-202ENST00000515467 ZNF853P0CG23 659 aa20.71■□□□□ 0.91
SDHAP3-202ENST00000515467 WWC1Q8IX03 1113 aa20.71■□□□□ 0.91
SDHAP3-202ENST00000515467 NARFQ9UHQ1 456 aa20.71■□□□□ 0.91
SDHAP3-202ENST00000515467 COL15A1P39059 1388 aa20.71■□□□□ 0.91
SDHAP3-202ENST00000515467 YY1P25490 414 aa20.69■□□□□ 0.9
SDHAP3-202ENST00000515467 SRP68Q9UHB9 627 aaKnown RBP20.69■□□□□ 0.9
SDHAP3-202ENST00000515467 ZNF330Q9Y3S2 320 aaPredicted RBP20.69■□□□□ 0.9
SDHAP3-202ENST00000515467 MMP10P09238 476 aa20.68■□□□□ 0.9
SDHAP3-202ENST00000515467 USPL1Q5W0Q7 1092 aa20.68■□□□□ 0.9
SDHAP3-202ENST00000515467 FHDC1Q9C0D6 1143 aaPredicted RBP20.68■□□□□ 0.9
SDHAP3-202ENST00000515467 IL16Q14005 1332 aa20.68■□□□□ 0.9
SDHAP3-202ENST00000515467 DCAF8L1A6NGE4 600 aa20.67■□□□□ 0.9
SDHAP3-202ENST00000515467 HOXB7P09629 217 aa20.67■□□□□ 0.9
SDHAP3-202ENST00000515467 WDR63Q8IWG1 891 aa20.67■□□□□ 0.9
SDHAP3-202ENST00000515467 MBIPQ9NS73 344 aa20.67■□□□□ 0.9
SDHAP3-202ENST00000515467 ERBB4Q15303 1308 aa20.67■□□□□ 0.9
SDHAP3-202ENST00000515467 KDM3BQ7LBC6 1761 aa20.67■□□□□ 0.9
SDHAP3-202ENST00000515467 NBPF26B4DH59 902 aa20.66■□□□□ 0.9
SDHAP3-202ENST00000515467 FKBP8Q14318 412 aa20.66■□□□□ 0.9
SDHAP3-202ENST00000515467 NBPF10Q6P3W6 841 aaKnown RBP20.66■□□□□ 0.9
SDHAP3-202ENST00000515467 NBPF15Q8N660 670 aa20.66■□□□□ 0.9
SDHAP3-202ENST00000515467 SYT17Q9BSW7 474 aa20.66■□□□□ 0.9
SDHAP3-202ENST00000515467 CHMP4AQ9BY43 222 aa20.66■□□□□ 0.9
SDHAP3-202ENST00000515467 PARP3Q9Y6F1 533 aa20.66■□□□□ 0.9
SDHAP3-202ENST00000515467 EIF2S2P20042 333 aaKnown RBP20.65■□□□□ 0.9
SDHAP3-202ENST00000515467 DZIP3Q86Y13 1208 aaKnown RBP20.65■□□□□ 0.9
SDHAP3-202ENST00000515467 MIER1Q8N108 512 aa20.65■□□□□ 0.9
SDHAP3-202ENST00000515467 TBC1D2BQ9UPU7 963 aa20.65■□□□□ 0.9
SDHAP3-202ENST00000515467 SENP3-EIF4A1A0A087X0R7 540 aa20.64■□□□□ 0.89
SDHAP3-202ENST00000515467 SALL2Q9Y467 1007 aaPredicted RBP20.64■□□□□ 0.89
SDHAP3-202ENST00000515467 CD2APQ9Y5K6 639 aa20.64■□□□□ 0.89
SDHAP3-202ENST00000515467 COL24A1Q17RW2 1714 aa20.64■□□□□ 0.89
SDHAP3-202ENST00000515467 RGL2O15211 777 aa20.63■□□□□ 0.89
SDHAP3-202ENST00000515467 TM4SF1P30408 202 aa20.63■□□□□ 0.89
SDHAP3-202ENST00000515467 PIP4K2AP48426 406 aaPredicted RBP20.63■□□□□ 0.89
SDHAP3-202ENST00000515467 KLHL34Q8N239 644 aa20.63■□□□□ 0.89
SDHAP3-202ENST00000515467 DUSP27Q5VZP5 1158 aa20.62■□□□□ 0.89
SDHAP3-202ENST00000515467 CLEC4GQ6UXB4 293 aa20.62■□□□□ 0.89
SDHAP3-202ENST00000515467 CAMTA2O94983 1202 aa20.61■□□□□ 0.89
SDHAP3-202ENST00000515467 BCL2L12Q9HB09 334 aa20.61■□□□□ 0.89
SDHAP3-202ENST00000515467 ZNF652Q9Y2D9 606 aa20.61■□□□□ 0.89
SDHAP3-202ENST00000515467 MYL6BP14649 208 aa20.6■□□□□ 0.89
SDHAP3-202ENST00000515467 KRT24Q2M2I5 525 aa20.6■□□□□ 0.89
SDHAP3-202ENST00000515467 NFIXQ14938 502 aa20.59■□□□□ 0.89
SDHAP3-202ENST00000515467 HDGFL1Q5TGJ6 251 aa20.59■□□□□ 0.89
SDHAP3-202ENST00000515467 DDX21Q9NR30 783 aaKnown RBP eCLIP20.59■□□□□ 0.89
SDHAP3-202ENST00000515467 ERVV-1B6SEH8 477 aa20.58■□□□□ 0.89
SDHAP3-202ENST00000515467 POLRMTO00411 1230 aaKnown RBP20.58■□□□□ 0.89
SDHAP3-202ENST00000515467 PDIA6Q15084 440 aa20.58■□□□□ 0.89
SDHAP3-202ENST00000515467 KIF6Q6ZMV9 814 aa20.58■□□□□ 0.89
SDHAP3-202ENST00000515467 DDR1Q08345 913 aa20.57■□□□□ 0.88
SDHAP3-202ENST00000515467 NECTIN2Q92692 538 aa20.57■□□□□ 0.88
SDHAP3-202ENST00000515467 SETDB2Q96T68 719 aa20.57■□□□□ 0.88
SDHAP3-202ENST00000515467 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
SDHAP3-202ENST00000515467 DBF4Q9UBU7 674 aaPredicted RBP20.57■□□□□ 0.88
SDHAP3-202ENST00000515467 C4AP0C0L4 1744 aa20.56■□□□□ 0.88
SDHAP3-202ENST00000515467 TBC1D9BQ66K14 1250 aa20.56■□□□□ 0.88
SDHAP3-202ENST00000515467 C8orf58Q8NAV2 365 aa20.56■□□□□ 0.88
SDHAP3-202ENST00000515467 TSR2Q969E8 191 aaKnown RBP20.56■□□□□ 0.88
SDHAP3-202ENST00000515467 ELL2O00472 640 aaPredicted RBP20.55■□□□□ 0.88
SDHAP3-202ENST00000515467 SERPINB2P05120 415 aa20.55■□□□□ 0.88
SDHAP3-202ENST00000515467 TGFB2P61812 414 aa20.55■□□□□ 0.88
SDHAP3-202ENST00000515467 GOLGA2Q08379 1002 aa20.55■□□□□ 0.88
SDHAP3-202ENST00000515467 BICDL1Q6ZP65 573 aa20.55■□□□□ 0.88
SDHAP3-202ENST00000515467 HYPKQ9NX55 129 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms