RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 GAS2L2Q8NHY3 880 aa32.39■■■□□ 2.78
CCND3-221ENST00000514588 PIM2Q9P1W9 311 aa32.39■■■□□ 2.78
CCND3-221ENST00000514588 NARFQ9UHQ1 456 aa32.39■■■□□ 2.78
CCND3-221ENST00000514588 GNAT3A8MTJ3 354 aa32.38■■■□□ 2.77
CCND3-221ENST00000514588 TTC5Q8N0Z6 440 aa32.37■■■□□ 2.77
CCND3-221ENST00000514588 TEFQ10587 303 aa32.36■■■□□ 2.77
CCND3-221ENST00000514588 CHRNA5P30532 468 aa32.35■■■□□ 2.77
CCND3-221ENST00000514588 NFIXQ14938 502 aa32.35■■■□□ 2.77
CCND3-221ENST00000514588 BCL2L12Q9HB09 334 aa32.35■■■□□ 2.77
CCND3-221ENST00000514588 KIF3CO14782 793 aa32.34■■■□□ 2.77
CCND3-221ENST00000514588 CANXP27824 592 aaKnown RBP32.34■■■□□ 2.77
CCND3-221ENST00000514588 DALRD3Q5D0E6 543 aaKnown RBP32.34■■■□□ 2.77
CCND3-221ENST00000514588 ZNF496Q96IT1 587 aaPredicted RBP32.34■■■□□ 2.77
CCND3-221ENST00000514588 ARFGEF1Q9Y6D6 1849 aa32.33■■■□□ 2.77
CCND3-221ENST00000514588 CFAP53Q96M91 514 aa32.33■■■□□ 2.77
CCND3-221ENST00000514588 STARD3NLO95772 234 aa32.32■■■□□ 2.76
CCND3-221ENST00000514588 ZNF790Q6PG37 636 aa32.32■■■□□ 2.76
CCND3-221ENST00000514588 PHACTR3Q96KR7 559 aa32.32■■■□□ 2.76
CCND3-221ENST00000514588 PRKAR2BP31323 418 aa32.31■■■□□ 2.76
CCND3-221ENST00000514588 RSPH6AQ9H0K4 717 aa32.31■■■□□ 2.76
CCND3-221ENST00000514588 CEMIPQ8WUJ3 1361 aa32.3■■■□□ 2.76
CCND3-221ENST00000514588 HEG1Q9ULI3 1381 aa32.3■■■□□ 2.76
CCND3-221ENST00000514588 SIPA1L3O60292 1781 aaPredicted RBP32.3■■■□□ 2.76
CCND3-221ENST00000514588 EIF5P55010 431 aaKnown RBP32.29■■■□□ 2.76
CCND3-221ENST00000514588 NRXN2Q9P2S2 1712 aa32.27■■■□□ 2.76
CCND3-221ENST00000514588 HSPA6P17066 643 aa32.27■■■□□ 2.76
CCND3-221ENST00000514588 C9orf131Q5VYM1 1079 aa32.27■■■□□ 2.76
CCND3-221ENST00000514588 AFDNP55196 1824 aaKnown RBP32.26■■■□□ 2.76
CCND3-221ENST00000514588 SERPINB2P05120 415 aa32.26■■■□□ 2.75
CCND3-221ENST00000514588 PPP2R1AP30153 589 aa32.26■■■□□ 2.75
CCND3-221ENST00000514588 TEX13AQ9BXU3 409 aaPredicted RBP32.26■■■□□ 2.75
CCND3-221ENST00000514588 CEP350Q5VT06 3117 aa32.25■■■□□ 2.75
CCND3-221ENST00000514588 A0A087WZG4 1122 aa32.25■■■□□ 2.75
CCND3-221ENST00000514588 NUDCQ9Y266 331 aa32.25■■■□□ 2.75
CCND3-221ENST00000514588 FMNL2Q96PY5 1086 aa32.24■■■□□ 2.75
CCND3-221ENST00000514588 KCNQ3O43525 872 aa32.21■■■□□ 2.75
CCND3-221ENST00000514588 U2AF1L5P0DN76 240 aaPredicted RBP32.21■■■□□ 2.75
CCND3-221ENST00000514588 U2AF1Q01081 240 aaKnown RBP eCLIP32.21■■■□□ 2.75
CCND3-221ENST00000514588 BICDL1Q6ZP65 573 aa32.21■■■□□ 2.75
CCND3-221ENST00000514588 NMRK2Q9NPI5 230 aa32.21■■■□□ 2.75
CCND3-221ENST00000514588 BTBD11A6QL63 1104 aa32.2■■■□□ 2.75
CCND3-221ENST00000514588 CARMIL3Q8ND23 1372 aa32.19■■■□□ 2.74
CCND3-221ENST00000514588 A1BGP04217 495 aa32.19■■■□□ 2.74
CCND3-221ENST00000514588 IL6STP40189 918 aaPredicted RBP32.19■■■□□ 2.74
CCND3-221ENST00000514588 RNF181Q9P0P0 153 aa32.19■■■□□ 2.74
CCND3-221ENST00000514588 ZNF330Q9Y3S2 320 aaPredicted RBP32.19■■■□□ 2.74
CCND3-221ENST00000514588 TBC1D9BQ66K14 1250 aa32.18■■■□□ 2.74
CCND3-221ENST00000514588 TBC1D2BQ9UPU7 963 aa32.18■■■□□ 2.74
CCND3-221ENST00000514588 SCN7AQ01118 1682 aa32.16■■■□□ 2.74
CCND3-221ENST00000514588 TOMM70O94826 608 aa32.16■■■□□ 2.74
CCND3-221ENST00000514588 C2CD5Q86YS7 1000 aa32.16■■■□□ 2.74
CCND3-221ENST00000514588 DLEC1Q9Y238 1755 aa32.15■■■□□ 2.74
CCND3-221ENST00000514588 MCM10Q7L590 875 aa32.14■■■□□ 2.74
CCND3-221ENST00000514588 TTLL6Q8N841 843 aa32.13■■■□□ 2.73
CCND3-221ENST00000514588 RTF1Q92541 710 aaKnown RBP32.13■■■□□ 2.73
CCND3-221ENST00000514588 H0YIN7 160 aa32.12■■■□□ 2.73
CCND3-221ENST00000514588 RASSF7Q02833 373 aa32.12■■■□□ 2.73
CCND3-221ENST00000514588 USP16Q9Y5T5 823 aa32.12■■■□□ 2.73
CCND3-221ENST00000514588 SBF1O95248 1867 aa32.12■■■□□ 2.73
CCND3-221ENST00000514588 CAMTA2O94983 1202 aa32.11■■■□□ 2.73
CCND3-221ENST00000514588 KDM2BQ8NHM5 1336 aa32.09■■■□□ 2.73
CCND3-221ENST00000514588 PRAMEF22A3QJZ6 481 aa32.09■■■□□ 2.73
CCND3-221ENST00000514588 DCTN1Q14203 1278 aa32.09■■■□□ 2.73
CCND3-221ENST00000514588 PRR5LQ6MZQ0 368 aa32.09■■■□□ 2.73
CCND3-221ENST00000514588 NPM2Q86SE8 214 aaKnown RBP32.09■■■□□ 2.73
CCND3-221ENST00000514588 HTATSF1O43719 755 aaKnown RBP32.08■■■□□ 2.73
CCND3-221ENST00000514588 BRIP1Q9BX63 1249 aa32.08■■■□□ 2.73
CCND3-221ENST00000514588 ANKRD31Q8N7Z5 1873 aa32.08■■■□□ 2.73
CCND3-221ENST00000514588 SNRPA1P09661 255 aaKnown RBP32.07■■■□□ 2.72
CCND3-221ENST00000514588 PIP4K2AP48426 406 aaPredicted RBP32.07■■■□□ 2.72
CCND3-221ENST00000514588 PRELPP51888 382 aa32.07■■■□□ 2.72
CCND3-221ENST00000514588 DZIP3Q86Y13 1208 aaKnown RBP32.07■■■□□ 2.72
CCND3-221ENST00000514588 CCDC24Q8N4L8 307 aa32.07■■■□□ 2.72
CCND3-221ENST00000514588 LMNB1P20700 586 aa32.05■■■□□ 2.72
CCND3-221ENST00000514588 PDE6BP35913 854 aa32.05■■■□□ 2.72
CCND3-221ENST00000514588 RBM46Q8TBY0 533 aaKnown RBP32.05■■■□□ 2.72
CCND3-221ENST00000514588 SETDB2Q96T68 719 aa32.05■■■□□ 2.72
CCND3-221ENST00000514588 APLP1P51693 650 aa32.04■■■□□ 2.72
CCND3-221ENST00000514588 PDZRN3Q9UPQ7 1066 aa32.04■■■□□ 2.72
CCND3-221ENST00000514588 ZC3H4Q9UPT8 1303 aaKnown RBP32.03■■■□□ 2.72
CCND3-221ENST00000514588 NFKBIEO00221 500 aa32.03■■■□□ 2.72
CCND3-221ENST00000514588 C16orf71Q8IYS4 520 aaPredicted RBP32.03■■■□□ 2.72
CCND3-221ENST00000514588 ZNF622Q969S3 477 aaKnown RBP eCLIP32.03■■■□□ 2.72
CCND3-221ENST00000514588 RRAGCQ9HB90 399 aa32.03■■■□□ 2.72
CCND3-221ENST00000514588 BCORQ6W2J9 1755 aa32.02■■■□□ 2.72
CCND3-221ENST00000514588 CNBD1Q8NA66 436 aa32.02■■■□□ 2.72
CCND3-221ENST00000514588 COL11A2P13942 1736 aaPredicted RBP32■■■□□ 2.71
CCND3-221ENST00000514588 TAF7Q15545 349 aaPredicted RBP32■■■□□ 2.71
CCND3-221ENST00000514588 NBPF26B4DH59 902 aa31.99■■■□□ 2.71
CCND3-221ENST00000514588 NBPF10Q6P3W6 841 aaKnown RBP31.99■■■□□ 2.71
CCND3-221ENST00000514588 NBPF15Q8N660 670 aa31.99■■■□□ 2.71
CCND3-221ENST00000514588 CLEC4GQ6UXB4 293 aa31.98■■■□□ 2.71
CCND3-221ENST00000514588 TNRC6CQ9HCJ0 1690 aaKnown RBP31.98■■■□□ 2.71
CCND3-221ENST00000514588 NPHP1O15259 732 aa31.97■■■□□ 2.71
CCND3-221ENST00000514588 C21orf2O43822 256 aa31.97■■■□□ 2.71
CCND3-221ENST00000514588 MIS18AQ9NYP9 233 aa31.97■■■□□ 2.71
CCND3-221ENST00000514588 ST5P78524 1137 aa31.96■■■□□ 2.71
CCND3-221ENST00000514588 FSTL1Q12841 308 aa31.96■■■□□ 2.71
CCND3-221ENST00000514588 ZNF219Q9P2Y4 722 aaPredicted RBP31.96■■■□□ 2.71
CCND3-221ENST00000514588 PLEKHF1Q96S99 279 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms