RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 CEP350Q5VT06 3117 aa16.43■□□□□ 0.22
SNHG4-208ENST00000514110 GNAT3A8MTJ3 354 aa16.43■□□□□ 0.22
SNHG4-208ENST00000514110 CHRNA5P30532 468 aa16.43■□□□□ 0.22
SNHG4-208ENST00000514110 GAS2L2Q8NHY3 880 aa16.43■□□□□ 0.22
SNHG4-208ENST00000514110 PIM2Q9P1W9 311 aa16.43■□□□□ 0.22
SNHG4-208ENST00000514110 NARFQ9UHQ1 456 aa16.43■□□□□ 0.22
SNHG4-208ENST00000514110 SIPA1L3O60292 1781 aaPredicted RBP16.43■□□□□ 0.22
SNHG4-208ENST00000514110 ARFGEF1Q9Y6D6 1849 aa16.42■□□□□ 0.22
SNHG4-208ENST00000514110 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
SNHG4-208ENST00000514110 NFIXQ14938 502 aa16.42■□□□□ 0.22
SNHG4-208ENST00000514110 TTC5Q8N0Z6 440 aa16.42■□□□□ 0.22
SNHG4-208ENST00000514110 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
SNHG4-208ENST00000514110 BCL2L12Q9HB09 334 aa16.42■□□□□ 0.22
SNHG4-208ENST00000514110 AFDNP55196 1824 aaKnown RBP16.41■□□□□ 0.22
SNHG4-208ENST00000514110 KIF3CO14782 793 aa16.41■□□□□ 0.22
SNHG4-208ENST00000514110 TEFQ10587 303 aa16.41■□□□□ 0.22
SNHG4-208ENST00000514110 DALRD3Q5D0E6 543 aaKnown RBP16.41■□□□□ 0.22
SNHG4-208ENST00000514110 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
SNHG4-208ENST00000514110 ZNF496Q96IT1 587 aaPredicted RBP16.41■□□□□ 0.22
SNHG4-208ENST00000514110 RSPH6AQ9H0K4 717 aa16.41■□□□□ 0.22
SNHG4-208ENST00000514110 PRKAR2BP31323 418 aa16.4■□□□□ 0.22
SNHG4-208ENST00000514110 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
SNHG4-208ENST00000514110 NRXN2Q9P2S2 1712 aa16.39■□□□□ 0.21
SNHG4-208ENST00000514110 STARD3NLO95772 234 aa16.39■□□□□ 0.21
SNHG4-208ENST00000514110 EIF5P55010 431 aaKnown RBP16.39■□□□□ 0.21
SNHG4-208ENST00000514110 CFAP53Q96M91 514 aa16.39■□□□□ 0.21
SNHG4-208ENST00000514110 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
SNHG4-208ENST00000514110 SERPINB2P05120 415 aa16.38■□□□□ 0.21
SNHG4-208ENST00000514110 PPP2R1AP30153 589 aa16.38■□□□□ 0.21
SNHG4-208ENST00000514110 C9orf131Q5VYM1 1079 aa16.38■□□□□ 0.21
SNHG4-208ENST00000514110 KCNQ3O43525 872 aa16.37■□□□□ 0.21
SNHG4-208ENST00000514110 HSPA6P17066 643 aa16.37■□□□□ 0.21
SNHG4-208ENST00000514110 BICDL1Q6ZP65 573 aa16.36■□□□□ 0.21
SNHG4-208ENST00000514110 FMNL2Q96PY5 1086 aa16.36■□□□□ 0.21
SNHG4-208ENST00000514110 TEX13AQ9BXU3 409 aaPredicted RBP16.36■□□□□ 0.21
SNHG4-208ENST00000514110 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
SNHG4-208ENST00000514110 A0A087WZG4 1122 aa16.35■□□□□ 0.21
SNHG4-208ENST00000514110 BTBD11A6QL63 1104 aa16.35■□□□□ 0.21
SNHG4-208ENST00000514110 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
SNHG4-208ENST00000514110 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
SNHG4-208ENST00000514110 NMRK2Q9NPI5 230 aa16.35■□□□□ 0.21
SNHG4-208ENST00000514110 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
SNHG4-208ENST00000514110 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
SNHG4-208ENST00000514110 A1BGP04217 495 aa16.34■□□□□ 0.21
SNHG4-208ENST00000514110 TBC1D9BQ66K14 1250 aa16.34■□□□□ 0.21
SNHG4-208ENST00000514110 TBC1D2BQ9UPU7 963 aa16.34■□□□□ 0.21
SNHG4-208ENST00000514110 ZNF330Q9Y3S2 320 aaPredicted RBP16.34■□□□□ 0.21
SNHG4-208ENST00000514110 DLEC1Q9Y238 1755 aa16.33■□□□□ 0.21
SNHG4-208ENST00000514110 IL6STP40189 918 aaPredicted RBP16.33■□□□□ 0.2
SNHG4-208ENST00000514110 RNF181Q9P0P0 153 aa16.33■□□□□ 0.2
SNHG4-208ENST00000514110 SBF1O95248 1867 aa16.32■□□□□ 0.2
SNHG4-208ENST00000514110 MCM10Q7L590 875 aa16.32■□□□□ 0.2
SNHG4-208ENST00000514110 C2CD5Q86YS7 1000 aa16.32■□□□□ 0.2
SNHG4-208ENST00000514110 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
SNHG4-208ENST00000514110 TOMM70O94826 608 aa16.31■□□□□ 0.2
SNHG4-208ENST00000514110 RASSF7Q02833 373 aa16.31■□□□□ 0.2
SNHG4-208ENST00000514110 DCTN1Q14203 1278 aa16.31■□□□□ 0.2
SNHG4-208ENST00000514110 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
SNHG4-208ENST00000514110 USP16Q9Y5T5 823 aa16.31■□□□□ 0.2
SNHG4-208ENST00000514110 ANKRD31Q8N7Z5 1873 aa16.31■□□□□ 0.2
SNHG4-208ENST00000514110 H0YIN7 160 aa16.3■□□□□ 0.2
SNHG4-208ENST00000514110 CAMTA2O94983 1202 aa16.3■□□□□ 0.2
SNHG4-208ENST00000514110 PIP4K2AP48426 406 aaPredicted RBP16.3■□□□□ 0.2
SNHG4-208ENST00000514110 CCDC24Q8N4L8 307 aa16.3■□□□□ 0.2
SNHG4-208ENST00000514110 RTF1Q92541 710 aaKnown RBP16.3■□□□□ 0.2
SNHG4-208ENST00000514110 PRELPP51888 382 aa16.29■□□□□ 0.2
SNHG4-208ENST00000514110 BCORQ6W2J9 1755 aa16.28■□□□□ 0.2
SNHG4-208ENST00000514110 PRR5LQ6MZQ0 368 aa16.28■□□□□ 0.2
SNHG4-208ENST00000514110 KDM2BQ8NHM5 1336 aa16.27■□□□□ 0.2
SNHG4-208ENST00000514110 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.2
SNHG4-208ENST00000514110 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.2
SNHG4-208ENST00000514110 BRIP1Q9BX63 1249 aa16.27■□□□□ 0.2
SNHG4-208ENST00000514110 COL11A2P13942 1736 aaPredicted RBP16.27■□□□□ 0.19
SNHG4-208ENST00000514110 SNRPA1P09661 255 aaKnown RBP16.26■□□□□ 0.19
SNHG4-208ENST00000514110 LMNB1P20700 586 aa16.26■□□□□ 0.19
SNHG4-208ENST00000514110 PDE6BP35913 854 aa16.26■□□□□ 0.19
SNHG4-208ENST00000514110 NPM2Q86SE8 214 aaKnown RBP16.26■□□□□ 0.19
SNHG4-208ENST00000514110 ZNF622Q969S3 477 aaKnown RBP eCLIP16.26■□□□□ 0.19
SNHG4-208ENST00000514110 SETDB2Q96T68 719 aa16.26■□□□□ 0.19
SNHG4-208ENST00000514110 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
SNHG4-208ENST00000514110 NFKBIEO00221 500 aa16.25■□□□□ 0.19
SNHG4-208ENST00000514110 APLP1P51693 650 aa16.25■□□□□ 0.19
SNHG4-208ENST00000514110 RBM46Q8TBY0 533 aaKnown RBP16.25■□□□□ 0.19
SNHG4-208ENST00000514110 MIS18AQ9NYP9 233 aa16.25■□□□□ 0.19
SNHG4-208ENST00000514110 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
SNHG4-208ENST00000514110 NBPF26B4DH59 902 aa16.24■□□□□ 0.19
SNHG4-208ENST00000514110 TAF7Q15545 349 aaPredicted RBP16.24■□□□□ 0.19
SNHG4-208ENST00000514110 NBPF10Q6P3W6 841 aaKnown RBP16.24■□□□□ 0.19
SNHG4-208ENST00000514110 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
SNHG4-208ENST00000514110 NBPF15Q8N660 670 aa16.24■□□□□ 0.19
SNHG4-208ENST00000514110 CNBD1Q8NA66 436 aa16.24■□□□□ 0.19
SNHG4-208ENST00000514110 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
SNHG4-208ENST00000514110 PDZRN3Q9UPQ7 1066 aa16.24■□□□□ 0.19
SNHG4-208ENST00000514110 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
SNHG4-208ENST00000514110 TIAM2Q8IVF5 1701 aa16.23■□□□□ 0.19
SNHG4-208ENST00000514110 C21orf2O43822 256 aa16.23■□□□□ 0.19
SNHG4-208ENST00000514110 PLEKHF1Q96S99 279 aa16.23■□□□□ 0.19
SNHG4-208ENST00000514110 DLG5Q8TDM6 1919 aa16.23■□□□□ 0.19
SNHG4-208ENST00000514110 CCDC88AQ3V6T2 1871 aa16.22■□□□□ 0.19
SNHG4-208ENST00000514110 NPHP1O15259 732 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms