RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 GNAT3A8MTJ3 354 aa16.91■□□□□ 0.3
VEGFA-216ENST00000512683 EIF5P55010 431 aaKnown RBP16.91■□□□□ 0.3
VEGFA-216ENST00000512683 TEFQ10587 303 aa16.91■□□□□ 0.3
VEGFA-216ENST00000512683 FSTL1Q12841 308 aa16.91■□□□□ 0.3
VEGFA-216ENST00000512683 SERPINB2P05120 415 aa16.9■□□□□ 0.3
VEGFA-216ENST00000512683 C16orf71Q8IYS4 520 aaPredicted RBP16.9■□□□□ 0.3
VEGFA-216ENST00000512683 ZBTB1Q9Y2K1 713 aa16.9■□□□□ 0.3
VEGFA-216ENST00000512683 KIF13BQ9NQT8 1826 aa16.9■□□□□ 0.3
VEGFA-216ENST00000512683 MRC1P22897 1456 aa16.9■□□□□ 0.3
VEGFA-216ENST00000512683 COL15A1P39059 1388 aa16.89■□□□□ 0.3
VEGFA-216ENST00000512683 CHRNA5P30532 468 aa16.89■□□□□ 0.29
VEGFA-216ENST00000512683 ZNF790Q6PG37 636 aa16.89■□□□□ 0.29
VEGFA-216ENST00000512683 TTLL6Q8N841 843 aa16.89■□□□□ 0.29
VEGFA-216ENST00000512683 BCL2L12Q9HB09 334 aa16.89■□□□□ 0.29
VEGFA-216ENST00000512683 CEP350Q5VT06 3117 aa16.89■□□□□ 0.29
VEGFA-216ENST00000512683 COL5A3P25940 1745 aaPredicted RBP16.88■□□□□ 0.29
VEGFA-216ENST00000512683 H0YIN7 160 aa16.88■□□□□ 0.29
VEGFA-216ENST00000512683 IL17REQ8NFR9 667 aa16.88■□□□□ 0.29
VEGFA-216ENST00000512683 CFAP53Q96M91 514 aa16.88■□□□□ 0.29
VEGFA-216ENST00000512683 NMRK2Q9NPI5 230 aa16.88■□□□□ 0.29
VEGFA-216ENST00000512683 RNF181Q9P0P0 153 aa16.88■□□□□ 0.29
VEGFA-216ENST00000512683 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
VEGFA-216ENST00000512683 U2SURPO15042 1029 aaKnown RBP16.87■□□□□ 0.29
VEGFA-216ENST00000512683 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
VEGFA-216ENST00000512683 IL6STP40189 918 aaPredicted RBP16.87■□□□□ 0.29
VEGFA-216ENST00000512683 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
VEGFA-216ENST00000512683 FMNL2Q96PY5 1086 aa16.87■□□□□ 0.29
VEGFA-216ENST00000512683 NUDCQ9Y266 331 aa16.87■□□□□ 0.29
VEGFA-216ENST00000512683 LMNB1P20700 586 aa16.86■□□□□ 0.29
VEGFA-216ENST00000512683 DNAJC5GQ8N7S2 189 aa16.86■□□□□ 0.29
VEGFA-216ENST00000512683 ZNF496Q96IT1 587 aaPredicted RBP16.86■□□□□ 0.29
VEGFA-216ENST00000512683 BRIP1Q9BX63 1249 aa16.86■□□□□ 0.29
VEGFA-216ENST00000512683 MYH14Q7Z406 1995 aaKnown RBP16.86■□□□□ 0.29
VEGFA-216ENST00000512683 SCN11AQ9UI33 1791 aa16.85■□□□□ 0.29
VEGFA-216ENST00000512683 PDE6BP35913 854 aa16.85■□□□□ 0.29
VEGFA-216ENST00000512683 C2CD5Q86YS7 1000 aa16.85■□□□□ 0.29
VEGFA-216ENST00000512683 HEG1Q9ULI3 1381 aa16.85■□□□□ 0.29
VEGFA-216ENST00000512683 RGL2O15211 777 aa16.84■□□□□ 0.29
VEGFA-216ENST00000512683 KCPQ6ZWJ8 1503 aa16.84■□□□□ 0.29
VEGFA-216ENST00000512683 HTATSF1O43719 755 aaKnown RBP16.83■□□□□ 0.28
VEGFA-216ENST00000512683 CEMIPQ8WUJ3 1361 aa16.83■□□□□ 0.28
VEGFA-216ENST00000512683 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
VEGFA-216ENST00000512683 GLTPD2A6NH11 291 aa16.82■□□□□ 0.28
VEGFA-216ENST00000512683 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
VEGFA-216ENST00000512683 VEGFAP15692 232 aaPredicted RBP16.82■□□□□ 0.28
VEGFA-216ENST00000512683 CLEC4GQ6UXB4 293 aa16.82■□□□□ 0.28
VEGFA-216ENST00000512683 SETDB2Q96T68 719 aa16.82■□□□□ 0.28
VEGFA-216ENST00000512683 RRAGCQ9HB90 399 aa16.82■□□□□ 0.28
VEGFA-216ENST00000512683 SMC1BQ8NDV3 1235 aa16.81■□□□□ 0.28
VEGFA-216ENST00000512683 COL3A1P02461 1466 aaPredicted RBP16.8■□□□□ 0.28
VEGFA-216ENST00000512683 TJP1Q07157 1748 aa16.8■□□□□ 0.28
VEGFA-216ENST00000512683 DPY19L2Q6NUT2 758 aa16.8■□□□□ 0.28
VEGFA-216ENST00000512683 RTF1Q92541 710 aaKnown RBP16.8■□□□□ 0.28
VEGFA-216ENST00000512683 RSPH6AQ9H0K4 717 aa16.8■□□□□ 0.28
VEGFA-216ENST00000512683 ADAMTS7Q9UKP4 1686 aa16.79■□□□□ 0.28
VEGFA-216ENST00000512683 PRKAR2BP31323 418 aa16.79■□□□□ 0.28
VEGFA-216ENST00000512683 SOGA3Q5TF21 947 aa16.79■□□□□ 0.28
VEGFA-216ENST00000512683 TBC1D9BQ66K14 1250 aa16.79■□□□□ 0.28
VEGFA-216ENST00000512683 BICDL1Q6ZP65 573 aa16.79■□□□□ 0.28
VEGFA-216ENST00000512683 CNKSR1Q969H4 720 aa16.79■□□□□ 0.28
VEGFA-216ENST00000512683 PHACTR3Q96KR7 559 aa16.79■□□□□ 0.28
VEGFA-216ENST00000512683 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
VEGFA-216ENST00000512683 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
VEGFA-216ENST00000512683 CARMIL3Q8ND23 1372 aa16.78■□□□□ 0.28
VEGFA-216ENST00000512683 A1BGP04217 495 aa16.78■□□□□ 0.28
VEGFA-216ENST00000512683 SNRPA1P09661 255 aaKnown RBP16.78■□□□□ 0.28
VEGFA-216ENST00000512683 PRR5LQ6MZQ0 368 aa16.78■□□□□ 0.28
VEGFA-216ENST00000512683 ZNF622Q969S3 477 aaKnown RBP eCLIP16.78■□□□□ 0.286e-16■□□□□ 8.8
VEGFA-216ENST00000512683 CAMTA2O94983 1202 aa16.77■□□□□ 0.28
VEGFA-216ENST00000512683 CNGB1Q14028 1251 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-216ENST00000512683 STYK1Q6J9G0 422 aa16.77■□□□□ 0.28
VEGFA-216ENST00000512683 JMYQ8N9B5 988 aa16.77■□□□□ 0.28
VEGFA-216ENST00000512683 KLRG1Q96E93 195 aa16.77■□□□□ 0.28
VEGFA-216ENST00000512683 LTBP3Q9NS15 1303 aa16.76■□□□□ 0.27
VEGFA-216ENST00000512683 NFKBIEO00221 500 aa16.76■□□□□ 0.27
VEGFA-216ENST00000512683 U2AF1L5P0DN76 240 aaPredicted RBP16.76■□□□□ 0.27
VEGFA-216ENST00000512683 ST5P78524 1137 aa16.76■□□□□ 0.27
VEGFA-216ENST00000512683 U2AF1Q01081 240 aaKnown RBP eCLIP16.76■□□□□ 0.27
VEGFA-216ENST00000512683 DZIP3Q86Y13 1208 aaKnown RBP16.76■□□□□ 0.27
VEGFA-216ENST00000512683 ZNF652Q9Y2D9 606 aa16.76■□□□□ 0.27
VEGFA-216ENST00000512683 USP16Q9Y5T5 823 aa16.76■□□□□ 0.27
VEGFA-216ENST00000512683 RASSF7Q02833 373 aa16.75■□□□□ 0.27
VEGFA-216ENST00000512683 CNBD1Q8NA66 436 aa16.75■□□□□ 0.27
VEGFA-216ENST00000512683 MASTLQ96GX5 879 aa16.75■□□□□ 0.27
VEGFA-216ENST00000512683 ARFGEF1Q9Y6D6 1849 aa16.75■□□□□ 0.27
VEGFA-216ENST00000512683 NPHP1O15259 732 aa16.74■□□□□ 0.27
VEGFA-216ENST00000512683 SRGNP10124 158 aa16.74■□□□□ 0.27
VEGFA-216ENST00000512683 PPP2R1AP30153 589 aa16.74■□□□□ 0.27
VEGFA-216ENST00000512683 TPTE2Q6XPS3 522 aa16.74■□□□□ 0.27
VEGFA-216ENST00000512683 ZNF330Q9Y3S2 320 aaPredicted RBP16.74■□□□□ 0.27
VEGFA-216ENST00000512683 BRCA1P38398 1863 aaKnown RBP16.73■□□□□ 0.27
VEGFA-216ENST00000512683 KCNQ3O43525 872 aa16.73■□□□□ 0.27
VEGFA-216ENST00000512683 C21orf2O43822 256 aa16.73■□□□□ 0.27
VEGFA-216ENST00000512683 PRELPP51888 382 aa16.73■□□□□ 0.27
VEGFA-216ENST00000512683 TAF7Q15545 349 aaPredicted RBP16.73■□□□□ 0.27
VEGFA-216ENST00000512683 ERFEQ4G0M1 354 aa16.73■□□□□ 0.27
VEGFA-216ENST00000512683 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
VEGFA-216ENST00000512683 KLRG2A4D1S0 409 aaPredicted RBP16.72■□□□□ 0.27
VEGFA-216ENST00000512683 NEFMP07197 916 aa16.72■□□□□ 0.27
VEGFA-216ENST00000512683 NRXN2Q9P2S2 1712 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms