RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 SEPT12Q8IYM1 358 aa6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 KCTD12Q96CX2 325 aaKnown RBP6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 WBP1LQ9NX94 342 aa6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 PCDHB3Q9Y5E6 796 aa6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 COL14A1Q05707 1796 aaKnown RBP6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 TNS1Q9HBL0 1735 aaKnown RBP6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 TRPM3Q9HCF6 1732 aaPredicted RBP6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 CRYBG1Q9Y4K1 1723 aa6.53□□□□□ -1.36
CALCOCO2-213ENST00000509112 THSD7AQ9UPZ6 1657 aa6.52□□□□□ -1.37
CALCOCO2-213ENST00000509112 YTHDC2Q9H6S0 1430 aaKnown RBP6.52□□□□□ -1.37
CALCOCO2-213ENST00000509112 DLC1Q96QB1 1528 aa6.52□□□□□ -1.37
CALCOCO2-213ENST00000509112 APBB1O00213 710 aa6.52□□□□□ -1.37
CALCOCO2-213ENST00000509112 NDUFV2P19404 249 aa6.52□□□□□ -1.37
CALCOCO2-213ENST00000509112 RFC5P40937 340 aa6.52□□□□□ -1.37
CALCOCO2-213ENST00000509112 BAG6P46379 1132 aa6.52□□□□□ -1.37
CALCOCO2-213ENST00000509112 KRT28Q7Z3Y7 464 aa6.52□□□□□ -1.37
CALCOCO2-213ENST00000509112 DEFB132Q7Z7B7 95 aa6.52□□□□□ -1.37
CALCOCO2-213ENST00000509112 PCDHGC3Q9UN70 934 aa6.52□□□□□ -1.37
CALCOCO2-213ENST00000509112 ADGRF5Q8IZF2 1346 aa6.51□□□□□ -1.37
CALCOCO2-213ENST00000509112 HRCP23327 699 aa6.51□□□□□ -1.37
CALCOCO2-213ENST00000509112 RETREG3Q86VR2 466 aa6.51□□□□□ -1.37
CALCOCO2-213ENST00000509112 PARD3Q8TEW0 1356 aa6.51□□□□□ -1.37
CALCOCO2-213ENST00000509112 RREB1Q92766 1687 aa6.5□□□□□ -1.37
CALCOCO2-213ENST00000509112 PLEKHH1Q9ULM0 1364 aa6.5□□□□□ -1.37
CALCOCO2-213ENST00000509112 ITGAEP38570 1179 aa6.5□□□□□ -1.37
CALCOCO2-213ENST00000509112 WAPLQ7Z5K2 1190 aa6.5□□□□□ -1.37
CALCOCO2-213ENST00000509112 C14orf93Q9H972 538 aaKnown RBP6.5□□□□□ -1.37
CALCOCO2-213ENST00000509112 HCSTQ9UBK5 93 aa6.5□□□□□ -1.37
CALCOCO2-213ENST00000509112 SLC27A5Q9Y2P5 690 aa6.5□□□□□ -1.37
CALCOCO2-213ENST00000509112 PCDHB15Q9Y5E8 787 aa6.5□□□□□ -1.37
CALCOCO2-213ENST00000509112 EIF3AQ14152 1382 aaKnown RBP6.49□□□□□ -1.37
CALCOCO2-213ENST00000509112 DHX57Q6P158 1386 aaKnown RBP6.49□□□□□ -1.37
CALCOCO2-213ENST00000509112 FMNL1O95466 1100 aaPredicted RBP6.49□□□□□ -1.37
CALCOCO2-213ENST00000509112 XPCQ01831 940 aaPredicted RBP6.49□□□□□ -1.37
CALCOCO2-213ENST00000509112 BRICD5Q6PL45 260 aa6.49□□□□□ -1.37
CALCOCO2-213ENST00000509112 SPNS2Q8IVW8 549 aa6.49□□□□□ -1.37
CALCOCO2-213ENST00000509112 HELBQ8NG08 1087 aaPredicted RBP6.49□□□□□ -1.37
CALCOCO2-213ENST00000509112 FAM83GA6ND36 823 aa6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 QPCTQ16769 361 aa6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 MSS51Q4VC12 460 aa6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 SCUBE3Q8IX30 993 aa6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 RNF166Q96A37 237 aaPredicted RBP6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 THAP11Q96EK4 314 aa6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 USB1Q9BQ65 265 aaKnown RBP6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 PLSCR2Q9NRY7 297 aa6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 RGPD3A6NKT7 1758 aaPredicted RBP6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 RGPD4Q7Z3J3 1758 aa6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 SPATA31A5Q5VU36 1347 aa6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 SPATA31A7Q8IWB4 1347 aa6.48□□□□□ -1.37
CALCOCO2-213ENST00000509112 ITSN1Q15811 1721 aa6.47□□□□□ -1.37
CALCOCO2-213ENST00000509112 TULP4Q9NRJ4 1543 aa6.47□□□□□ -1.37
CALCOCO2-213ENST00000509112 MCM6Q14566 821 aa6.47□□□□□ -1.37
CALCOCO2-213ENST00000509112 BLOC1S3Q6QNY0 202 aa6.47□□□□□ -1.37
CALCOCO2-213ENST00000509112 IL21Q9HBE4 155 aa6.47□□□□□ -1.37
CALCOCO2-213ENST00000509112 STK26Q9P289 416 aa6.47□□□□□ -1.37
CALCOCO2-213ENST00000509112 C11orf95C9JLR9 678 aaPredicted RBP6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 C6orf229H3BNL8 230 aa6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 ADGRB1O14514 1584 aa6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 ZPR1O75312 459 aa6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 ITGBL1O95965 494 aaPredicted RBP6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 GUCA2AQ02747 115 aa6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 PUS10Q3MIT2 529 aaKnown RBP6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 RTL5Q5HYW3 569 aaPredicted RBP6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 NUP188Q5SRE5 1749 aa6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 TMEM132EQ6IEE7 984 aa6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 HLA-CQ95604 372 aa6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 CAMKK2Q96RR4 588 aa6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 PRM3Q9NNZ6 103 aa6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 BTG4Q9NY30 223 aa6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 CCDC9Q9Y3X0 531 aaKnown RBP6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 PHRF1Q9P1Y6 1649 aaKnown RBP6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 ATP7BP35670 1465 aa6.46□□□□□ -1.38
CALCOCO2-213ENST00000509112 GPRASP1Q5JY77 1395 aa6.45□□□□□ -1.38
CALCOCO2-213ENST00000509112 CSPP1Q1MSJ5 1256 aa6.45□□□□□ -1.38
CALCOCO2-213ENST00000509112 TJAP1Q5JTD0 557 aa6.45□□□□□ -1.38
CALCOCO2-213ENST00000509112 FAM196AQ6ZSG2 479 aa6.45□□□□□ -1.38
CALCOCO2-213ENST00000509112 CABLES1Q8TDN4 633 aa6.45□□□□□ -1.38
CALCOCO2-213ENST00000509112 MPHOSPH9Q99550 1183 aa6.45□□□□□ -1.38
CALCOCO2-213ENST00000509112 SPATA31A1Q5TZJ5 1347 aa6.45□□□□□ -1.38
CALCOCO2-213ENST00000509112 PARP4Q9UKK3 1724 aaKnown RBP6.45□□□□□ -1.38
CALCOCO2-213ENST00000509112 A6NJR5 290 aa6.44□□□□□ -1.38
CALCOCO2-213ENST00000509112 ADH1BP00325 375 aa6.44□□□□□ -1.38
CALCOCO2-213ENST00000509112 PTPN5P54829 565 aa6.44□□□□□ -1.38
CALCOCO2-213ENST00000509112 R3HDM1Q15032 1099 aaKnown RBP6.44□□□□□ -1.38
CALCOCO2-213ENST00000509112 RGL3Q3MIN7 710 aa6.44□□□□□ -1.38
CALCOCO2-213ENST00000509112 PRR7Q8TB68 274 aa6.44□□□□□ -1.38
CALCOCO2-213ENST00000509112 PRAM1Q96QH2 718 aa6.44□□□□□ -1.38
CALCOCO2-213ENST00000509112 SPSB2Q99619 263 aa6.44□□□□□ -1.38
CALCOCO2-213ENST00000509112 MTRQ99707 1265 aa6.44□□□□□ -1.38
CALCOCO2-213ENST00000509112 NINLQ9Y2I6 1382 aa6.44□□□□□ -1.38
CALCOCO2-213ENST00000509112 LMO7Q8WWI1 1683 aa6.43□□□□□ -1.38
CALCOCO2-213ENST00000509112 CFAP99D6REC4 459 aa6.43□□□□□ -1.38
CALCOCO2-213ENST00000509112 USP17L8P0C7I0 530 aa6.43□□□□□ -1.38
CALCOCO2-213ENST00000509112 MMP16P51512 607 aa6.43□□□□□ -1.38
CALCOCO2-213ENST00000509112 EZH2Q15910 746 aaKnown RBP6.43□□□□□ -1.38
CALCOCO2-213ENST00000509112 CFAP70Q5T0N1 1121 aa6.43□□□□□ -1.38
CALCOCO2-213ENST00000509112 IFFO2Q5TF58 517 aa6.43□□□□□ -1.38
CALCOCO2-213ENST00000509112 RNF19BQ6ZMZ0 732 aa6.43□□□□□ -1.38
CALCOCO2-213ENST00000509112 THRAP3Q9Y2W1 955 aaKnown RBP6.43□□□□□ -1.38
CALCOCO2-213ENST00000509112 TOPAZ1Q8N9V7 1692 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms