RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 NRXN2Q9P2S2 1712 aa21.74■■□□□ 1.07
LMNA-222ENST00000508500 U2AF1L5P0DN76 240 aaPredicted RBP21.73■■□□□ 1.07
LMNA-222ENST00000508500 TGFB2P61812 414 aa21.73■■□□□ 1.07
LMNA-222ENST00000508500 U2AF1Q01081 240 aaKnown RBP eCLIP21.73■■□□□ 1.07
LMNA-222ENST00000508500 TEFQ10587 303 aa21.73■■□□□ 1.07
LMNA-222ENST00000508500 ZNF790Q6PG37 636 aa21.73■■□□□ 1.07
LMNA-222ENST00000508500 NUDCQ9Y266 331 aa21.73■■□□□ 1.07
LMNA-222ENST00000508500 PARP3Q9Y6F1 533 aa21.73■■□□□ 1.07
LMNA-222ENST00000508500 KCNQ3O43525 872 aa21.72■■□□□ 1.07
LMNA-222ENST00000508500 TM4SF1P30408 202 aa21.72■■□□□ 1.07
LMNA-222ENST00000508500 USPL1Q5W0Q7 1092 aa21.72■■□□□ 1.07
LMNA-222ENST00000508500 BCL2L12Q9HB09 334 aa21.72■■□□□ 1.07
LMNA-222ENST00000508500 GPBP1L1Q9HC44 474 aaPredicted RBP21.72■■□□□ 1.07
LMNA-222ENST00000508500 COL15A1P39059 1388 aa21.72■■□□□ 1.07
LMNA-222ENST00000508500 HEG1Q9ULI3 1381 aa21.72■■□□□ 1.07
LMNA-222ENST00000508500 DPEP1P16444 411 aa21.71■■□□□ 1.07
LMNA-222ENST00000508500 KCNA3P22001 575 aa21.71■■□□□ 1.07
LMNA-222ENST00000508500 ZEB1P37275 1124 aaPredicted RBP21.71■■□□□ 1.07
LMNA-222ENST00000508500 POLRMTO00411 1230 aaKnown RBP21.7■■□□□ 1.06
LMNA-222ENST00000508500 FCHSD2O94868 740 aa21.7■■□□□ 1.06
LMNA-222ENST00000508500 TTC5Q8N0Z6 440 aa21.7■■□□□ 1.06
LMNA-222ENST00000508500 NARFQ9UHQ1 456 aa21.7■■□□□ 1.06
LMNA-222ENST00000508500 KIF3CO14782 793 aa21.69■■□□□ 1.06
LMNA-222ENST00000508500 CANXP27824 592 aaKnown RBP21.69■■□□□ 1.06
LMNA-222ENST00000508500 ZPR1O75312 459 aa21.68■■□□□ 1.06
LMNA-222ENST00000508500 SCN7AQ01118 1682 aa21.67■■□□□ 1.06
LMNA-222ENST00000508500 EIF5P55010 431 aaKnown RBP21.67■■□□□ 1.06
LMNA-222ENST00000508500 DCTN1Q14203 1278 aa21.67■■□□□ 1.06
LMNA-222ENST00000508500 MCM10Q7L590 875 aa21.67■■□□□ 1.06
LMNA-222ENST00000508500 SBF1O95248 1867 aa21.66■■□□□ 1.06
LMNA-222ENST00000508500 DLEC1Q9Y238 1755 aa21.66■■□□□ 1.06
LMNA-222ENST00000508500 BTBD11A6QL63 1104 aa21.66■■□□□ 1.06
LMNA-222ENST00000508500 NFIXQ14938 502 aa21.66■■□□□ 1.06
LMNA-222ENST00000508500 ANKRD31Q8N7Z5 1873 aa21.66■■□□□ 1.06
LMNA-222ENST00000508500 HSPA6P17066 643 aa21.65■■□□□ 1.06
LMNA-222ENST00000508500 ZNF526Q8TF50 670 aaPredicted RBP21.65■■□□□ 1.06
LMNA-222ENST00000508500 BCS1LQ9Y276 419 aa21.65■■□□□ 1.06
LMNA-222ENST00000508500 BCORQ6W2J9 1755 aa21.64■■□□□ 1.06
LMNA-222ENST00000508500 STARD3NLO95772 234 aa21.64■■□□□ 1.05
LMNA-222ENST00000508500 FMNL2Q96PY5 1086 aa21.64■■□□□ 1.05
LMNA-222ENST00000508500 PRAMEF22A3QJZ6 481 aa21.63■■□□□ 1.05
LMNA-222ENST00000508500 A1BGP04217 495 aa21.63■■□□□ 1.05
LMNA-222ENST00000508500 PLEKHF1Q96S99 279 aa21.63■■□□□ 1.05
LMNA-222ENST00000508500 KDM3BQ7LBC6 1761 aa21.63■■□□□ 1.05
LMNA-222ENST00000508500 CHRNA5P30532 468 aa21.62■■□□□ 1.05
LMNA-222ENST00000508500 TEX13AQ9BXU3 409 aaPredicted RBP21.62■■□□□ 1.05
LMNA-222ENST00000508500 USP16Q9Y5T5 823 aa21.62■■□□□ 1.05
LMNA-222ENST00000508500 CCDC88AQ3V6T2 1871 aa21.6■■□□□ 1.05
LMNA-222ENST00000508500 HTATSF1O43719 755 aaKnown RBP21.6■■□□□ 1.05
LMNA-222ENST00000508500 SERPINB2P05120 415 aa21.6■■□□□ 1.05
LMNA-222ENST00000508500 IL6STP40189 918 aaPredicted RBP21.6■■□□□ 1.05
LMNA-222ENST00000508500 RTF1Q92541 710 aaKnown RBP21.6■■□□□ 1.05
LMNA-222ENST00000508500 LAMB4A4D0S4 1761 aa21.59■■□□□ 1.05
LMNA-222ENST00000508500 PIM2Q9P1W9 311 aa21.59■■□□□ 1.05
LMNA-222ENST00000508500 TBC1D2BQ9UPU7 963 aa21.59■■□□□ 1.05
LMNA-222ENST00000508500 CARMIL3Q8ND23 1372 aa21.59■■□□□ 1.05
LMNA-222ENST00000508500 PIP4K2AP48426 406 aaPredicted RBP21.58■■□□□ 1.05
LMNA-222ENST00000508500 TBC1D9BQ66K14 1250 aa21.58■■□□□ 1.05
LMNA-222ENST00000508500 A0A087WZG4 1122 aa21.57■■□□□ 1.04
LMNA-222ENST00000508500 BICDL1Q6ZP65 573 aa21.57■■□□□ 1.04
LMNA-222ENST00000508500 ARHGAP27Q6ZUM4 889 aa21.57■■□□□ 1.04
LMNA-222ENST00000508500 MIS18AQ9NYP9 233 aa21.57■■□□□ 1.04
LMNA-222ENST00000508500 ZNF330Q9Y3S2 320 aaPredicted RBP21.57■■□□□ 1.04
LMNA-222ENST00000508500 COL11A2P13942 1736 aaPredicted RBP21.56■■□□□ 1.04
LMNA-222ENST00000508500 DDX10Q13206 875 aaKnown RBP21.56■■□□□ 1.04
LMNA-222ENST00000508500 CACNA1SQ13698 1873 aa21.56■■□□□ 1.04
LMNA-222ENST00000508500 CAMTA2O94983 1202 aa21.55■■□□□ 1.04
LMNA-222ENST00000508500 TAF7Q15545 349 aaPredicted RBP21.55■■□□□ 1.04
LMNA-222ENST00000508500 IFFO2Q5TF58 517 aa21.55■■□□□ 1.04
LMNA-222ENST00000508500 SNRPA1P09661 255 aaKnown RBP21.54■■□□□ 1.04
LMNA-222ENST00000508500 DALRD3Q5D0E6 543 aaKnown RBP21.54■■□□□ 1.04
LMNA-222ENST00000508500 WDR90Q96KV7 1748 aa21.53■■□□□ 1.04
LMNA-222ENST00000508500 NBPF26B4DH59 902 aa21.53■■□□□ 1.04
LMNA-222ENST00000508500 RALBP1Q15311 655 aa21.53■■□□□ 1.04
LMNA-222ENST00000508500 NFE2L2Q16236 605 aa21.53■■□□□ 1.04
LMNA-222ENST00000508500 NBPF10Q6P3W6 841 aaKnown RBP21.53■■□□□ 1.04
LMNA-222ENST00000508500 NBPF15Q8N660 670 aa21.53■■□□□ 1.04
LMNA-222ENST00000508500 THUMPD2Q9BTF0 503 aaKnown RBP21.53■■□□□ 1.04
LMNA-222ENST00000508500 TNRC6CQ9HCJ0 1690 aaKnown RBP21.53■■□□□ 1.04
LMNA-222ENST00000508500 NMRK2Q9NPI5 230 aa21.52■■□□□ 1.04
LMNA-222ENST00000508500 NUP98P52948 1817 aa21.52■■□□□ 1.04
LMNA-222ENST00000508500 TOMM70O94826 608 aa21.51■■□□□ 1.03
LMNA-222ENST00000508500 DZIP3Q86Y13 1208 aaKnown RBP21.51■■□□□ 1.03
LMNA-222ENST00000508500 CCDC24Q8N4L8 307 aa21.51■■□□□ 1.03
LMNA-222ENST00000508500 C9orf131Q5VYM1 1079 aa21.5■■□□□ 1.03
LMNA-222ENST00000508500 PRR5LQ6MZQ0 368 aa21.5■■□□□ 1.03
LMNA-222ENST00000508500 DNAJC5GQ8N7S2 189 aa21.5■■□□□ 1.03
LMNA-222ENST00000508500 SLX4Q8IY92 1834 aa21.48■■□□□ 1.03
LMNA-222ENST00000508500 FER1L6Q2WGJ9 1857 aa21.48■■□□□ 1.03
LMNA-222ENST00000508500 NEFMP07197 916 aa21.48■■□□□ 1.03
LMNA-222ENST00000508500 C2CD5Q86YS7 1000 aa21.48■■□□□ 1.03
LMNA-222ENST00000508500 ARFGEF2Q9Y6D5 1785 aa21.48■■□□□ 1.03
LMNA-222ENST00000508500 APLP1P51693 650 aa21.46■■□□□ 1.03
LMNA-222ENST00000508500 PRELPP51888 382 aa21.46■■□□□ 1.03
LMNA-222ENST00000508500 EIF4A1P60842 406 aaKnown RBP21.46■■□□□ 1.03
LMNA-222ENST00000508500 DICER1Q9UPY3 1922 aaKnown RBP21.46■■□□□ 1.03
LMNA-222ENST00000508500 H0YIN7 160 aa21.45■■□□□ 1.02
LMNA-222ENST00000508500 RASSF7Q02833 373 aa21.45■■□□□ 1.02
LMNA-222ENST00000508500 SETDB2Q96T68 719 aa21.45■■□□□ 1.02
LMNA-222ENST00000508500 BRIP1Q9BX63 1249 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms