RNA–Protein interactions for RNA: ENST00000507655.5

SSBP2-208, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-208ENST00000507655 RFC4P35249 363 aa23.78■■□□□ 1.4
SSBP2-208ENST00000507655 CCDC184Q52MB2 194 aa23.78■■□□□ 1.4
SSBP2-208ENST00000507655 THUMPD2Q9BTF0 503 aaKnown RBP23.78■■□□□ 1.4
SSBP2-208ENST00000507655 ZBTB1Q9Y2K1 713 aa23.78■■□□□ 1.4
SSBP2-208ENST00000507655 STARD3NLO95772 234 aa23.77■■□□□ 1.4
SSBP2-208ENST00000507655 PNISRQ8TF01 805 aaKnown RBP23.76■■□□□ 1.39
SSBP2-208ENST00000507655 GYS1P13807 737 aa23.75■■□□□ 1.39
SSBP2-208ENST00000507655 LMOD3Q0VAK6 560 aa23.75■■□□□ 1.39
SSBP2-208ENST00000507655 COL15A1P39059 1388 aa23.75■■□□□ 1.39
SSBP2-208ENST00000507655 NLGN1Q8N2Q7 840 aa23.74■■□□□ 1.39
SSBP2-208ENST00000507655 MIS18AQ9NYP9 233 aa23.74■■□□□ 1.39
SSBP2-208ENST00000507655 RRP7AQ9Y3A4 280 aaKnown RBP23.74■■□□□ 1.39
SSBP2-208ENST00000507655 USP42Q9H9J4 1324 aaKnown RBP23.74■■□□□ 1.39
SSBP2-208ENST00000507655 SCN7AQ01118 1682 aa23.73■■□□□ 1.39
SSBP2-208ENST00000507655 BCORQ6W2J9 1755 aa23.73■■□□□ 1.39
SSBP2-208ENST00000507655 AFDNP55196 1824 aaKnown RBP23.73■■□□□ 1.39
SSBP2-208ENST00000507655 SNRPA1P09661 255 aaKnown RBP23.72■■□□□ 1.39
SSBP2-208ENST00000507655 PRAMEF22A3QJZ6 481 aa23.71■■□□□ 1.39
SSBP2-208ENST00000507655 CANXP27824 592 aaKnown RBP23.71■■□□□ 1.39
SSBP2-208ENST00000507655 EIF5P55010 431 aaKnown RBP23.71■■□□□ 1.39
SSBP2-208ENST00000507655 NEUROD2Q15784 382 aa23.71■■□□□ 1.39
SSBP2-208ENST00000507655 SRP68Q9UHB9 627 aaKnown RBP23.71■■□□□ 1.39
SSBP2-208ENST00000507655 TRIM35Q9UPQ4 493 aa23.71■■□□□ 1.39
SSBP2-208ENST00000507655 USP16Q9Y5T5 823 aa23.71■■□□□ 1.39
SSBP2-208ENST00000507655 KLHL34Q8N239 644 aa23.7■■□□□ 1.38
SSBP2-208ENST00000507655 KIAA1551Q9HCM1 1747 aa23.7■■□□□ 1.38
SSBP2-208ENST00000507655 CHD4Q14839 1912 aa23.69■■□□□ 1.38
SSBP2-208ENST00000507655 MMP10P09238 476 aa23.69■■□□□ 1.38
SSBP2-208ENST00000507655 BABAM1Q9NWV8 329 aa23.69■■□□□ 1.38
SSBP2-208ENST00000507655 NARFQ9UHQ1 456 aa23.69■■□□□ 1.38
SSBP2-208ENST00000507655 A1BGP04217 495 aa23.68■■□□□ 1.38
SSBP2-208ENST00000507655 IL6STP40189 918 aaPredicted RBP23.68■■□□□ 1.38
SSBP2-208ENST00000507655 EIF4A1P60842 406 aaKnown RBP23.68■■□□□ 1.38
SSBP2-208ENST00000507655 MRS2Q9HD23 443 aa23.68■■□□□ 1.38
SSBP2-208ENST00000507655 CD2APQ9Y5K6 639 aa23.68■■□□□ 1.38
SSBP2-208ENST00000507655 NRXN2Q9P2S2 1712 aa23.67■■□□□ 1.38
SSBP2-208ENST00000507655 ZPR1O75312 459 aa23.67■■□□□ 1.38
SSBP2-208ENST00000507655 FKBP8Q14318 412 aa23.67■■□□□ 1.38
SSBP2-208ENST00000507655 NLGN2Q8NFZ4 835 aa23.67■■□□□ 1.38
SSBP2-208ENST00000507655 N4BP2Q86UW6 1770 aaPredicted RBP23.66■■□□□ 1.38
SSBP2-208ENST00000507655 APAF1O14727 1248 aa23.66■■□□□ 1.38
SSBP2-208ENST00000507655 USPL1Q5W0Q7 1092 aa23.66■■□□□ 1.38
SSBP2-208ENST00000507655 TSPYL4Q9UJ04 414 aa23.66■■□□□ 1.38
SSBP2-208ENST00000507655 BRCA1P38398 1863 aaKnown RBP23.65■■□□□ 1.38
SSBP2-208ENST00000507655 A0A087WZG4 1122 aa23.65■■□□□ 1.38
SSBP2-208ENST00000507655 GIGYF1O75420 1035 aaPredicted RBP23.65■■□□□ 1.38
SSBP2-208ENST00000507655 BCL2L12Q9HB09 334 aa23.64■■□□□ 1.37
SSBP2-208ENST00000507655 DCAF8L1A6NGE4 600 aa23.63■■□□□ 1.37
SSBP2-208ENST00000507655 TM4SF1P30408 202 aa23.63■■□□□ 1.37
SSBP2-208ENST00000507655 PARP3Q9Y6F1 533 aa23.63■■□□□ 1.37
SSBP2-208ENST00000507655 GOLGB1Q14789 3259 aaKnown RBP23.62■■□□□ 1.37
SSBP2-208ENST00000507655 C10orf71Q711Q0 1435 aa23.62■■□□□ 1.37
SSBP2-208ENST00000507655 NUP98P52948 1817 aa23.62■■□□□ 1.37
SSBP2-208ENST00000507655 UTRNP46939 3433 aa23.61■■□□□ 1.37
SSBP2-208ENST00000507655 NBPF26B4DH59 902 aa23.61■■□□□ 1.37
SSBP2-208ENST00000507655 CHL1O00533 1208 aa23.61■■□□□ 1.37
SSBP2-208ENST00000507655 PIP4K2AP48426 406 aaPredicted RBP23.61■■□□□ 1.37
SSBP2-208ENST00000507655 DDR1Q08345 913 aa23.61■■□□□ 1.37
SSBP2-208ENST00000507655 NBPF10Q6P3W6 841 aaKnown RBP23.61■■□□□ 1.37
SSBP2-208ENST00000507655 NBPF15Q8N660 670 aa23.61■■□□□ 1.37
SSBP2-208ENST00000507655 ZNF330Q9Y3S2 320 aaPredicted RBP23.6■■□□□ 1.37
SSBP2-208ENST00000507655 POLRMTO00411 1230 aaKnown RBP23.59■■□□□ 1.37
SSBP2-208ENST00000507655 TBC1D2BQ9UPU7 963 aa23.59■■□□□ 1.37
SSBP2-208ENST00000507655 NFIXQ14938 502 aa23.58■■□□□ 1.37
SSBP2-208ENST00000507655 NPM2Q86SE8 214 aaKnown RBP23.58■■□□□ 1.37
SSBP2-208ENST00000507655 CAMTA2O94983 1202 aa23.57■■□□□ 1.36
SSBP2-208ENST00000507655 DZIP3Q86Y13 1208 aaKnown RBP23.57■■□□□ 1.36
SSBP2-208ENST00000507655 CFAP44Q96MT7 982 aa23.57■■□□□ 1.36
SSBP2-208ENST00000507655 ANKRD31Q8N7Z5 1873 aa23.56■■□□□ 1.36
SSBP2-208ENST00000507655 PXDNLA1KZ92 1463 aa23.56■■□□□ 1.36
SSBP2-208ENST00000507655 DLEC1Q9Y238 1755 aa23.55■■□□□ 1.36
SSBP2-208ENST00000507655 ZNF853P0CG23 659 aa23.55■■□□□ 1.36
SSBP2-208ENST00000507655 LAS1LQ9Y4W2 734 aaKnown RBP23.55■■□□□ 1.36
SSBP2-208ENST00000507655 ERBB4Q15303 1308 aa23.54■■□□□ 1.36
SSBP2-208ENST00000507655 ARFGEF1Q9Y6D6 1849 aa23.54■■□□□ 1.36
SSBP2-208ENST00000507655 TGFB2P61812 414 aa23.53■■□□□ 1.36
SSBP2-208ENST00000507655 CALD1Q05682 793 aaKnown RBP23.53■■□□□ 1.36
SSBP2-208ENST00000507655 GPR162Q16538 588 aa23.53■■□□□ 1.36
SSBP2-208ENST00000507655 CCDC27Q2M243 656 aa23.53■■□□□ 1.36
SSBP2-208ENST00000507655 NCBP3Q53F19 620 aaKnown RBP23.53■■□□□ 1.36
SSBP2-208ENST00000507655 TBC1D9BQ66K14 1250 aa23.53■■□□□ 1.36
SSBP2-208ENST00000507655 RGL2O15211 777 aa23.52■■□□□ 1.36
SSBP2-208ENST00000507655 IFT57Q9NWB7 429 aa23.52■■□□□ 1.36
SSBP2-208ENST00000507655 SERPINB2P05120 415 aa23.51■■□□□ 1.35
SSBP2-208ENST00000507655 YBX3P16989 372 aaKnown RBP eCLIP23.51■■□□□ 1.359e-8■■□□□ 11.5
SSBP2-208ENST00000507655 GNAI1P63096 354 aa23.51■■□□□ 1.35
SSBP2-208ENST00000507655 KRT24Q2M2I5 525 aa23.51■■□□□ 1.35
SSBP2-208ENST00000507655 CLEC4GQ6UXB4 293 aa23.51■■□□□ 1.35
SSBP2-208ENST00000507655 MBIPQ9NS73 344 aa23.51■■□□□ 1.35
SSBP2-208ENST00000507655 BICDL1Q6ZP65 573 aa23.5■■□□□ 1.35
SSBP2-208ENST00000507655 ANKRD36CQ5JPF3 1778 aa23.5■■□□□ 1.35
SSBP2-208ENST00000507655 PELP1Q8IZL8 1130 aaKnown RBP23.49■■□□□ 1.35
SSBP2-208ENST00000507655 CARMIL3Q8ND23 1372 aa23.49■■□□□ 1.35
SSBP2-208ENST00000507655 HOXB7P09629 217 aa23.48■■□□□ 1.35
SSBP2-208ENST00000507655 EIF2S2P20042 333 aaKnown RBP23.48■■□□□ 1.35
SSBP2-208ENST00000507655 PDIA6Q15084 440 aa23.48■■□□□ 1.35
SSBP2-208ENST00000507655 LRP10Q7Z4F1 713 aa23.48■■□□□ 1.35
SSBP2-208ENST00000507655 WWC1Q8IX03 1113 aa23.48■■□□□ 1.35
SSBP2-208ENST00000507655 ZNF652Q9Y2D9 606 aa23.48■■□□□ 1.35
SSBP2-208ENST00000507655 MYL6BP14649 208 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms