RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 NRXN2Q9P2S2 1712 aa31.28■■■□□ 2.6
CALCOCO2-209ENST00000507076 KIF7Q2M1P5 1343 aa31.26■■■□□ 2.6
CALCOCO2-209ENST00000507076 CYP19A1P11511 503 aaPredicted RBP31.26■■■□□ 2.59
CALCOCO2-209ENST00000507076 TM4SF1P30408 202 aa31.26■■■□□ 2.59
CALCOCO2-209ENST00000507076 APLP1P51693 650 aa31.26■■■□□ 2.59
CALCOCO2-209ENST00000507076 TNRC6CQ9HCJ0 1690 aaKnown RBP31.25■■■□□ 2.59
CALCOCO2-209ENST00000507076 RNF181Q9P0P0 153 aa31.25■■■□□ 2.59
CALCOCO2-209ENST00000507076 COL15A1P39059 1388 aa31.25■■■□□ 2.59
CALCOCO2-209ENST00000507076 CCDC88AQ3V6T2 1871 aa31.25■■■□□ 2.59
CALCOCO2-209ENST00000507076 MTHFSDQ2M296 383 aaKnown RBP31.23■■■□□ 2.59
CALCOCO2-209ENST00000507076 ZBTB1Q9Y2K1 713 aa31.23■■■□□ 2.59
CALCOCO2-209ENST00000507076 NFIXQ14938 502 aa31.21■■■□□ 2.59
CALCOCO2-209ENST00000507076 CC2D1BQ5T0F9 858 aaKnown RBP31.2■■■□□ 2.59
CALCOCO2-209ENST00000507076 NARFQ9UHQ1 456 aa31.2■■■□□ 2.59
CALCOCO2-209ENST00000507076 DIAPH1O60610 1272 aaKnown RBP31.19■■■□□ 2.58
CALCOCO2-209ENST00000507076 C16orf71Q8IYS4 520 aaPredicted RBP31.19■■■□□ 2.58
CALCOCO2-209ENST00000507076 SIPA1L3O60292 1781 aaPredicted RBP31.19■■■□□ 2.58
CALCOCO2-209ENST00000507076 RBM46Q8TBY0 533 aaKnown RBP31.18■■■□□ 2.58
CALCOCO2-209ENST00000507076 KDM2BQ8NHM5 1336 aa31.18■■■□□ 2.58
CALCOCO2-209ENST00000507076 BCL2L12Q9HB09 334 aa31.17■■■□□ 2.58
CALCOCO2-209ENST00000507076 TIAM2Q8IVF5 1701 aa31.17■■■□□ 2.58
CALCOCO2-209ENST00000507076 RASSF7Q02833 373 aa31.16■■■□□ 2.58
CALCOCO2-209ENST00000507076 ANKRD31Q8N7Z5 1873 aa31.16■■■□□ 2.58
CALCOCO2-209ENST00000507076 CANXP27824 592 aaKnown RBP31.15■■■□□ 2.58
CALCOCO2-209ENST00000507076 DNAJC5GQ8N7S2 189 aa31.15■■■□□ 2.58
CALCOCO2-209ENST00000507076 SCN7AQ01118 1682 aa31.15■■■□□ 2.58
CALCOCO2-209ENST00000507076 COL3A1P02461 1466 aaPredicted RBP31.14■■■□□ 2.58
CALCOCO2-209ENST00000507076 PER1O15534 1290 aaPredicted RBP31.14■■■□□ 2.58
CALCOCO2-209ENST00000507076 VSIG10Q8N0Z9 540 aa31.14■■■□□ 2.58
CALCOCO2-209ENST00000507076 SERPINB2P05120 415 aa31.13■■■□□ 2.57
CALCOCO2-209ENST00000507076 CNGB1Q14028 1251 aaPredicted RBP31.13■■■□□ 2.57
CALCOCO2-209ENST00000507076 RRAGCQ9HB90 399 aa31.13■■■□□ 2.57
CALCOCO2-209ENST00000507076 CARMIL3Q8ND23 1372 aa31.13■■■□□ 2.57
CALCOCO2-209ENST00000507076 HTRA3P83110 453 aa31.11■■■□□ 2.57
CALCOCO2-209ENST00000507076 TTC5Q8N0Z6 440 aa31.11■■■□□ 2.57
CALCOCO2-209ENST00000507076 BICDL1Q6ZP65 573 aa31.1■■■□□ 2.57
CALCOCO2-209ENST00000507076 CACNA1SQ13698 1873 aa31.1■■■□□ 2.57
CALCOCO2-209ENST00000507076 COL11A2P13942 1736 aaPredicted RBP31.1■■■□□ 2.57
CALCOCO2-209ENST00000507076 U2SURPO15042 1029 aaKnown RBP31.08■■■□□ 2.57
CALCOCO2-209ENST00000507076 FSTL1Q12841 308 aa31.07■■■□□ 2.56
CALCOCO2-209ENST00000507076 C2CD5Q86YS7 1000 aa31.07■■■□□ 2.56
CALCOCO2-209ENST00000507076 STARD3NLO95772 234 aa31.06■■■□□ 2.56
CALCOCO2-209ENST00000507076 PRELPP51888 382 aa31.06■■■□□ 2.56
CALCOCO2-209ENST00000507076 EIF5P55010 431 aaKnown RBP31.06■■■□□ 2.56
CALCOCO2-209ENST00000507076 TTLL6Q8N841 843 aa31.06■■■□□ 2.56
CALCOCO2-209ENST00000507076 ZNF496Q96IT1 587 aaPredicted RBP31.06■■■□□ 2.56
CALCOCO2-209ENST00000507076 TEFQ10587 303 aa31.05■■■□□ 2.56
CALCOCO2-209ENST00000507076 ZNF330Q9Y3S2 320 aaPredicted RBP31.05■■■□□ 2.56
CALCOCO2-209ENST00000507076 HEG1Q9ULI3 1381 aa31.05■■■□□ 2.56
CALCOCO2-209ENST00000507076 IL17REQ8NFR9 667 aa31.04■■■□□ 2.56
CALCOCO2-209ENST00000507076 DICER1Q9UPY3 1922 aaKnown RBP31.04■■■□□ 2.56
CALCOCO2-209ENST00000507076 BCORQ6W2J9 1755 aa31.03■■■□□ 2.56
CALCOCO2-209ENST00000507076 LMNB1P20700 586 aa31.03■■■□□ 2.56
CALCOCO2-209ENST00000507076 ZC3H4Q9UPT8 1303 aaKnown RBP31.02■■■□□ 2.56
CALCOCO2-209ENST00000507076 FER1L6Q2WGJ9 1857 aa31.02■■■□□ 2.56
CALCOCO2-209ENST00000507076 A0A087WZG4 1122 aa31.02■■■□□ 2.56
CALCOCO2-209ENST00000507076 GNAT3A8MTJ3 354 aa31.02■■■□□ 2.56
CALCOCO2-209ENST00000507076 H0YIN7 160 aa31.02■■■□□ 2.56
CALCOCO2-209ENST00000507076 TBC1D9BQ66K14 1250 aa31.02■■■□□ 2.56
CALCOCO2-209ENST00000507076 ZNF790Q6PG37 636 aa31.02■■■□□ 2.56
CALCOCO2-209ENST00000507076 GAS2L2Q8NHY3 880 aa31.01■■■□□ 2.55
CALCOCO2-209ENST00000507076 KLRG1Q96E93 195 aa31■■■□□ 2.55
CALCOCO2-209ENST00000507076 TBC1D2BQ9UPU7 963 aa31■■■□□ 2.55
CALCOCO2-209ENST00000507076 NPC1L1Q9UHC9 1359 aa31■■■□□ 2.55
CALCOCO2-209ENST00000507076 NFKBIEO00221 500 aa30.99■■■□□ 2.55
CALCOCO2-209ENST00000507076 CCDC24Q8N4L8 307 aa30.99■■■□□ 2.55
CALCOCO2-209ENST00000507076 SMC1BQ8NDV3 1235 aa30.99■■■□□ 2.55
CALCOCO2-209ENST00000507076 GLTPD2A6NH11 291 aa30.97■■■□□ 2.55
CALCOCO2-209ENST00000507076 ZNF622Q969S3 477 aaKnown RBP eCLIP30.96■■■□□ 2.551e-13■□□□□ 11.3
CALCOCO2-209ENST00000507076 TEX13AQ9BXU3 409 aaPredicted RBP30.96■■■□□ 2.55
CALCOCO2-209ENST00000507076 ZNF219Q9P2Y4 722 aaPredicted RBP30.96■■■□□ 2.55
CALCOCO2-209ENST00000507076 ARFGEF2Q9Y6D5 1785 aa30.95■■■□□ 2.55
CALCOCO2-209ENST00000507076 PRR5LQ6MZQ0 368 aa30.95■■■□□ 2.55
CALCOCO2-209ENST00000507076 FMNL2Q96PY5 1086 aa30.95■■■□□ 2.55
CALCOCO2-209ENST00000507076 SLX4Q8IY92 1834 aa30.95■■■□□ 2.55
CALCOCO2-209ENST00000507076 A1BGP04217 495 aa30.94■■■□□ 2.54
CALCOCO2-209ENST00000507076 IL6STP40189 918 aaPredicted RBP30.94■■■□□ 2.54
CALCOCO2-209ENST00000507076 CEMIPQ8WUJ3 1361 aa30.93■■■□□ 2.54
CALCOCO2-209ENST00000507076 VEGFAP15692 232 aaPredicted RBP30.93■■■□□ 2.54
CALCOCO2-209ENST00000507076 KCNQ3O43525 872 aa30.92■■■□□ 2.54
CALCOCO2-209ENST00000507076 PDE6BP35913 854 aa30.92■■■□□ 2.54
CALCOCO2-209ENST00000507076 JMYQ8N9B5 988 aa30.92■■■□□ 2.54
CALCOCO2-209ENST00000507076 PHACTR3Q96KR7 559 aa30.92■■■□□ 2.54
CALCOCO2-209ENST00000507076 BRIP1Q9BX63 1249 aa30.92■■■□□ 2.54
CALCOCO2-209ENST00000507076 C21orf2O43822 256 aa30.91■■■□□ 2.54
CALCOCO2-209ENST00000507076 PRKAR2BP31323 418 aa30.91■■■□□ 2.54
CALCOCO2-209ENST00000507076 NPM2Q86SE8 214 aaKnown RBP30.9■■■□□ 2.54
CALCOCO2-209ENST00000507076 BTBD11A6QL63 1104 aa30.89■■■□□ 2.54
CALCOCO2-209ENST00000507076 CAMTA2O94983 1202 aa30.89■■■□□ 2.54
CALCOCO2-209ENST00000507076 NPHP1O15259 732 aa30.88■■■□□ 2.53
CALCOCO2-209ENST00000507076 PIP4K2AP48426 406 aaPredicted RBP30.88■■■□□ 2.53
CALCOCO2-209ENST00000507076 CNBD1Q8NA66 436 aa30.88■■■□□ 2.53
CALCOCO2-209ENST00000507076 SETDB2Q96T68 719 aa30.88■■■□□ 2.53
CALCOCO2-209ENST00000507076 RSPH6AQ9H0K4 717 aa30.88■■■□□ 2.53
CALCOCO2-209ENST00000507076 PDZRN3Q9UPQ7 1066 aa30.88■■■□□ 2.53
CALCOCO2-209ENST00000507076 DZIP3Q86Y13 1208 aaKnown RBP30.86■■■□□ 2.53
CALCOCO2-209ENST00000507076 CFAP53Q96M91 514 aa30.86■■■□□ 2.53
CALCOCO2-209ENST00000507076 ERFEQ4G0M1 354 aa30.85■■■□□ 2.53
CALCOCO2-209ENST00000507076 PRAMEF22A3QJZ6 481 aa30.84■■■□□ 2.53
CALCOCO2-209ENST00000507076 POTECB2RU33 542 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms