RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 SGIP1Q9BQI5 828 aa25.34■■□□□ 1.65
LMNA-221ENST00000506981 MIS18AQ9NYP9 233 aa25.34■■□□□ 1.65
LMNA-221ENST00000506981 APAF1O14727 1248 aa25.33■■□□□ 1.65
LMNA-221ENST00000506981 INTS5Q6P9B9 1019 aaKnown RBP25.33■■□□□ 1.65
LMNA-221ENST00000506981 ARXQ96QS3 562 aa25.33■■□□□ 1.65
LMNA-221ENST00000506981 SNRPA1P09661 255 aaKnown RBP25.32■■□□□ 1.64
LMNA-221ENST00000506981 ARHGEF1Q92888 912 aaKnown RBP25.32■■□□□ 1.64
LMNA-221ENST00000506981 TSPYL4Q9UJ04 414 aa25.32■■□□□ 1.64
LMNA-221ENST00000506981 ZBTB1Q9Y2K1 713 aa25.31■■□□□ 1.64
LMNA-221ENST00000506981 CANXP27824 592 aaKnown RBP25.3■■□□□ 1.64
LMNA-221ENST00000506981 TRIM35Q9UPQ4 493 aa25.3■■□□□ 1.64
LMNA-221ENST00000506981 SOS1Q07889 1333 aaPredicted RBP25.3■■□□□ 1.64
LMNA-221ENST00000506981 COL15A1P39059 1388 aa25.3■■□□□ 1.64
LMNA-221ENST00000506981 SRCAPQ6ZRS2 3230 aa25.29■■□□□ 1.64
LMNA-221ENST00000506981 NPM2Q86SE8 214 aaKnown RBP25.29■■□□□ 1.64
LMNA-221ENST00000506981 BABAM1Q9NWV8 329 aa25.29■■□□□ 1.64
LMNA-221ENST00000506981 KLHL34Q8N239 644 aa25.27■■□□□ 1.64
LMNA-221ENST00000506981 ZPR1O75312 459 aa25.26■■□□□ 1.63
LMNA-221ENST00000506981 CALD1Q05682 793 aaKnown RBP25.26■■□□□ 1.63
LMNA-221ENST00000506981 ZNF330Q9Y3S2 320 aaPredicted RBP25.26■■□□□ 1.63
LMNA-221ENST00000506981 LAS1LQ9Y4W2 734 aaKnown RBP25.26■■□□□ 1.63
LMNA-221ENST00000506981 EIF4A1P60842 406 aaKnown RBP25.25■■□□□ 1.63
LMNA-221ENST00000506981 FAM9BQ8IZU0 186 aa25.25■■□□□ 1.63
LMNA-221ENST00000506981 NLGN1Q8N2Q7 840 aa25.25■■□□□ 1.63
LMNA-221ENST00000506981 USP16Q9Y5T5 823 aa25.25■■□□□ 1.63
LMNA-221ENST00000506981 USP42Q9H9J4 1324 aaKnown RBP25.25■■□□□ 1.63
LMNA-221ENST00000506981 SCN7AQ01118 1682 aa25.25■■□□□ 1.63
LMNA-221ENST00000506981 A0A087WZG4 1122 aa25.24■■□□□ 1.63
LMNA-221ENST00000506981 PRAMEF22A3QJZ6 481 aa25.24■■□□□ 1.63
LMNA-221ENST00000506981 FHDC1Q9C0D6 1143 aaPredicted RBP25.24■■□□□ 1.63
LMNA-221ENST00000506981 A1BGP04217 495 aa25.23■■□□□ 1.63
LMNA-221ENST00000506981 GYS1P13807 737 aa25.23■■□□□ 1.63
LMNA-221ENST00000506981 IL6STP40189 918 aaPredicted RBP25.23■■□□□ 1.63
LMNA-221ENST00000506981 SRP68Q9UHB9 627 aaKnown RBP25.23■■□□□ 1.63
LMNA-221ENST00000506981 BCORQ6W2J9 1755 aa25.23■■□□□ 1.63
LMNA-221ENST00000506981 GIGYF1O75420 1035 aaPredicted RBP25.22■■□□□ 1.63
LMNA-221ENST00000506981 EIF5P55010 431 aaKnown RBP25.21■■□□□ 1.63
LMNA-221ENST00000506981 NARFQ9UHQ1 456 aa25.21■■□□□ 1.63
LMNA-221ENST00000506981 CHL1O00533 1208 aa25.2■■□□□ 1.62
LMNA-221ENST00000506981 MMP10P09238 476 aa25.2■■□□□ 1.62
LMNA-221ENST00000506981 USPL1Q5W0Q7 1092 aa25.19■■□□□ 1.62
LMNA-221ENST00000506981 CFAP44Q96MT7 982 aa25.19■■□□□ 1.62
LMNA-221ENST00000506981 SYT17Q9BSW7 474 aa25.19■■□□□ 1.62
LMNA-221ENST00000506981 AFDNP55196 1824 aaKnown RBP25.17■■□□□ 1.62
LMNA-221ENST00000506981 KIF13BQ9NQT8 1826 aa25.17■■□□□ 1.62
LMNA-221ENST00000506981 DCAF8L1A6NGE4 600 aa25.17■■□□□ 1.62
LMNA-221ENST00000506981 GNAI1P63096 354 aa25.17■■□□□ 1.62
LMNA-221ENST00000506981 DIEXFQ68CQ4 756 aaKnown RBP25.17■■□□□ 1.62
LMNA-221ENST00000506981 IFT57Q9NWB7 429 aa25.17■■□□□ 1.62
LMNA-221ENST00000506981 PARP3Q9Y6F1 533 aa25.17■■□□□ 1.62
LMNA-221ENST00000506981 PIP4K2AP48426 406 aaPredicted RBP25.16■■□□□ 1.62
LMNA-221ENST00000506981 FKBP8Q14318 412 aa25.16■■□□□ 1.62
LMNA-221ENST00000506981 CCDC27Q2M243 656 aa25.16■■□□□ 1.62
LMNA-221ENST00000506981 SENP3-EIF4A1A0A087X0R7 540 aa25.15■■□□□ 1.62
LMNA-221ENST00000506981 CCER2I3L3R5 266 aa25.15■■□□□ 1.62
LMNA-221ENST00000506981 NCBP3Q53F19 620 aaKnown RBP25.14■■□□□ 1.62
LMNA-221ENST00000506981 DZIP3Q86Y13 1208 aaKnown RBP25.14■■□□□ 1.62
LMNA-221ENST00000506981 TBC1D2BQ9UPU7 963 aa25.14■■□□□ 1.62
LMNA-221ENST00000506981 ERBB4Q15303 1308 aa25.13■■□□□ 1.61
LMNA-221ENST00000506981 MBIPQ9NS73 344 aa25.13■■□□□ 1.61
LMNA-221ENST00000506981 NUP98P52948 1817 aa25.12■■□□□ 1.61
LMNA-221ENST00000506981 EIF2S2P20042 333 aaKnown RBP25.12■■□□□ 1.61
LMNA-221ENST00000506981 WWC1Q8IX03 1113 aa25.12■■□□□ 1.61
LMNA-221ENST00000506981 CD2APQ9Y5K6 639 aa25.12■■□□□ 1.61
LMNA-221ENST00000506981 NBPF26B4DH59 902 aa25.11■■□□□ 1.61
LMNA-221ENST00000506981 ZNF853P0CG23 659 aa25.11■■□□□ 1.61
LMNA-221ENST00000506981 NBPF10Q6P3W6 841 aaKnown RBP25.11■■□□□ 1.61
LMNA-221ENST00000506981 NBPF15Q8N660 670 aa25.11■■□□□ 1.61
LMNA-221ENST00000506981 SALL2Q9Y467 1007 aaPredicted RBP25.11■■□□□ 1.61
LMNA-221ENST00000506981 NGEFQ8N5V2 710 aa25.1■■□□□ 1.61
LMNA-221ENST00000506981 NRXN2Q9P2S2 1712 aa25.09■■□□□ 1.61
LMNA-221ENST00000506981 N4BP2Q86UW6 1770 aaPredicted RBP25.09■■□□□ 1.61
LMNA-221ENST00000506981 BCL2L12Q9HB09 334 aa25.09■■□□□ 1.61
LMNA-221ENST00000506981 ZNF652Q9Y2D9 606 aa25.09■■□□□ 1.61
LMNA-221ENST00000506981 HOXB7P09629 217 aa25.08■■□□□ 1.61
LMNA-221ENST00000506981 MYL6BP14649 208 aa25.08■■□□□ 1.61
LMNA-221ENST00000506981 NLGN2Q8NFZ4 835 aa25.08■■□□□ 1.61
LMNA-221ENST00000506981 C10orf71Q711Q0 1435 aa25.08■■□□□ 1.61
LMNA-221ENST00000506981 CAMTA2O94983 1202 aa25.07■■□□□ 1.6
LMNA-221ENST00000506981 TM4SF1P30408 202 aa25.07■■□□□ 1.6
LMNA-221ENST00000506981 DDR1Q08345 913 aa25.07■■□□□ 1.6
LMNA-221ENST00000506981 NFIXQ14938 502 aa25.07■■□□□ 1.6
LMNA-221ENST00000506981 KRT24Q2M2I5 525 aa25.07■■□□□ 1.6
LMNA-221ENST00000506981 BICDL1Q6ZP65 573 aa25.07■■□□□ 1.6
LMNA-221ENST00000506981 IL16Q14005 1332 aa25.07■■□□□ 1.6
LMNA-221ENST00000506981 POLRMTO00411 1230 aaKnown RBP25.06■■□□□ 1.6
LMNA-221ENST00000506981 KIF6Q6ZMV9 814 aa25.06■■□□□ 1.6
LMNA-221ENST00000506981 HDGFL1Q5TGJ6 251 aa25.05■■□□□ 1.6
LMNA-221ENST00000506981 DUSP27Q5VZP5 1158 aa25.05■■□□□ 1.6
LMNA-221ENST00000506981 NECTIN2Q92692 538 aa25.05■■□□□ 1.6
LMNA-221ENST00000506981 KIAA1551Q9HCM1 1747 aa25.05■■□□□ 1.6
LMNA-221ENST00000506981 CARMIL3Q8ND23 1372 aa25.04■■□□□ 1.6
LMNA-221ENST00000506981 TBC1D9BQ66K14 1250 aa25.03■■□□□ 1.6
LMNA-221ENST00000506981 CLEC4GQ6UXB4 293 aa25.03■■□□□ 1.6
LMNA-221ENST00000506981 WDR63Q8IWG1 891 aa25.03■■□□□ 1.6
LMNA-221ENST00000506981 PELP1Q8IZL8 1130 aaKnown RBP25.03■■□□□ 1.6
LMNA-221ENST00000506981 ANKRD36CQ5JPF3 1778 aa25.03■■□□□ 1.6
LMNA-221ENST00000506981 CHD4Q14839 1912 aa25.02■■□□□ 1.6
LMNA-221ENST00000506981 RGL2O15211 777 aa25.02■■□□□ 1.6
LMNA-221ENST00000506981 SERPINB2P05120 415 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms