RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 ZBTB1Q9Y2K1 713 aa20.59■□□□□ 0.89
CLDND1-211ENST00000506575 USP42Q9H9J4 1324 aaKnown RBP20.58■□□□□ 0.89
CLDND1-211ENST00000506575 SRP68Q9UHB9 627 aaKnown RBP20.58■□□□□ 0.89
CLDND1-211ENST00000506575 COL15A1P39059 1388 aa20.58■□□□□ 0.88
CLDND1-211ENST00000506575 KCNQ3O43525 872 aa20.57■□□□□ 0.88
CLDND1-211ENST00000506575 CANXP27824 592 aaKnown RBP20.57■□□□□ 0.88
CLDND1-211ENST00000506575 TAF7Q15545 349 aaPredicted RBP20.57■□□□□ 0.88
CLDND1-211ENST00000506575 PARP3Q9Y6F1 533 aa20.57■□□□□ 0.88
CLDND1-211ENST00000506575 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
CLDND1-211ENST00000506575 YY1P25490 414 aa20.56■□□□□ 0.88
CLDND1-211ENST00000506575 UTRNP46939 3433 aa20.56■□□□□ 0.88
CLDND1-211ENST00000506575 USPL1Q5W0Q7 1092 aa20.54■□□□□ 0.88
CLDND1-211ENST00000506575 NPM2Q86SE8 214 aaKnown RBP20.54■□□□□ 0.88
CLDND1-211ENST00000506575 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
CLDND1-211ENST00000506575 CHD4Q14839 1912 aa20.53■□□□□ 0.88
CLDND1-211ENST00000506575 GOLGB1Q14789 3259 aaKnown RBP20.53■□□□□ 0.88
CLDND1-211ENST00000506575 A0A087WZG4 1122 aa20.53■□□□□ 0.88
CLDND1-211ENST00000506575 SNRPA1P09661 255 aaKnown RBP20.53■□□□□ 0.88
CLDND1-211ENST00000506575 RIPK4P57078 832 aa20.53■□□□□ 0.88
CLDND1-211ENST00000506575 FKBP8Q14318 412 aa20.53■□□□□ 0.88
CLDND1-211ENST00000506575 NARFQ9UHQ1 456 aa20.53■□□□□ 0.88
CLDND1-211ENST00000506575 ZNF330Q9Y3S2 320 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-211ENST00000506575 MIS18AQ9NYP9 233 aa20.52■□□□□ 0.88
CLDND1-211ENST00000506575 KIF13BQ9NQT8 1826 aa20.51■□□□□ 0.87
CLDND1-211ENST00000506575 EIF5P55010 431 aaKnown RBP20.51■□□□□ 0.87
CLDND1-211ENST00000506575 LMOD3Q0VAK6 560 aa20.51■□□□□ 0.87
CLDND1-211ENST00000506575 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
CLDND1-211ENST00000506575 THUMPD2Q9BTF0 503 aaKnown RBP20.51■□□□□ 0.87
CLDND1-211ENST00000506575 KDM3BQ7LBC6 1761 aa20.5■□□□□ 0.87
CLDND1-211ENST00000506575 GRIN3BO60391 1043 aa20.5■□□□□ 0.87
CLDND1-211ENST00000506575 A1BGP04217 495 aa20.5■□□□□ 0.87
CLDND1-211ENST00000506575 IL6STP40189 918 aaPredicted RBP20.5■□□□□ 0.87
CLDND1-211ENST00000506575 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
CLDND1-211ENST00000506575 TMPOP42166 694 aaKnown RBP20.49■□□□□ 0.87
CLDND1-211ENST00000506575 ADAMTS8Q9UP79 889 aa20.49■□□□□ 0.87
CLDND1-211ENST00000506575 USP16Q9Y5T5 823 aa20.49■□□□□ 0.87
CLDND1-211ENST00000506575 C10orf71Q711Q0 1435 aa20.49■□□□□ 0.87
CLDND1-211ENST00000506575 PRAMEF22A3QJZ6 481 aa20.48■□□□□ 0.87
CLDND1-211ENST00000506575 YBX3P16989 372 aaKnown RBP eCLIP20.48■□□□□ 0.87
CLDND1-211ENST00000506575 TM4SF1P30408 202 aa20.47■□□□□ 0.87
CLDND1-211ENST00000506575 TGFB2P61812 414 aa20.47■□□□□ 0.87
CLDND1-211ENST00000506575 DDR1Q08345 913 aa20.47■□□□□ 0.87
CLDND1-211ENST00000506575 NEUROD2Q15784 382 aa20.47■□□□□ 0.87
CLDND1-211ENST00000506575 RRP7AQ9Y3A4 280 aaKnown RBP20.47■□□□□ 0.87
CLDND1-211ENST00000506575 N4BP2Q86UW6 1770 aaPredicted RBP20.46■□□□□ 0.87
CLDND1-211ENST00000506575 POLRMTO00411 1230 aaKnown RBP20.46■□□□□ 0.87
CLDND1-211ENST00000506575 WWC3Q9ULE0 1092 aa20.46■□□□□ 0.87
CLDND1-211ENST00000506575 TBC1D2BQ9UPU7 963 aa20.46■□□□□ 0.87
CLDND1-211ENST00000506575 LAMB4A4D0S4 1761 aa20.46■□□□□ 0.87
CLDND1-211ENST00000506575 SCN7AQ01118 1682 aa20.45■□□□□ 0.86
CLDND1-211ENST00000506575 PXDNLA1KZ92 1463 aa20.45■□□□□ 0.86
CLDND1-211ENST00000506575 NFIXQ14938 502 aa20.45■□□□□ 0.86
CLDND1-211ENST00000506575 BCL2L12Q9HB09 334 aa20.45■□□□□ 0.86
CLDND1-211ENST00000506575 PIP4K2AP48426 406 aaPredicted RBP20.44■□□□□ 0.86
CLDND1-211ENST00000506575 EIF4A1P60842 406 aaKnown RBP20.44■□□□□ 0.86
CLDND1-211ENST00000506575 TSPYL4Q9UJ04 414 aa20.44■□□□□ 0.86
CLDND1-211ENST00000506575 KIAA1551Q9HCM1 1747 aa20.44■□□□□ 0.86
CLDND1-211ENST00000506575 A0A0G2JLW4 131 aa20.43■□□□□ 0.86
CLDND1-211ENST00000506575 BICDL1Q6ZP65 573 aa20.43■□□□□ 0.86
CLDND1-211ENST00000506575 DZIP3Q86Y13 1208 aaKnown RBP20.43■□□□□ 0.86
CLDND1-211ENST00000506575 AFDNP55196 1824 aaKnown RBP20.43■□□□□ 0.86
CLDND1-211ENST00000506575 ANP32CO43423 234 aa20.42■□□□□ 0.86
CLDND1-211ENST00000506575 GIGYF1O75420 1035 aaPredicted RBP20.41■□□□□ 0.86
CLDND1-211ENST00000506575 SERPINB2P05120 415 aa20.41■□□□□ 0.86
CLDND1-211ENST00000506575 DPEP1P16444 411 aa20.41■□□□□ 0.86
CLDND1-211ENST00000506575 BABAM1Q9NWV8 329 aa20.41■□□□□ 0.86
CLDND1-211ENST00000506575 BCORQ6W2J9 1755 aa20.41■□□□□ 0.86
CLDND1-211ENST00000506575 CAMTA2O94983 1202 aa20.4■□□□□ 0.86
CLDND1-211ENST00000506575 NRXN2Q9P2S2 1712 aa20.39■□□□□ 0.86
CLDND1-211ENST00000506575 NBPF26B4DH59 902 aa20.39■□□□□ 0.85
CLDND1-211ENST00000506575 TBC1D9BQ66K14 1250 aa20.39■□□□□ 0.85
CLDND1-211ENST00000506575 NBPF10Q6P3W6 841 aaKnown RBP20.39■□□□□ 0.85
CLDND1-211ENST00000506575 NBPF15Q8N660 670 aa20.39■□□□□ 0.85
CLDND1-211ENST00000506575 BCS1LQ9Y276 419 aa20.39■□□□□ 0.85
CLDND1-211ENST00000506575 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
CLDND1-211ENST00000506575 ZNF652Q9Y2D9 606 aa20.38■□□□□ 0.85
CLDND1-211ENST00000506575 LAS1LQ9Y4W2 734 aaKnown RBP20.38■□□□□ 0.85
CLDND1-211ENST00000506575 BRCA1P38398 1863 aaKnown RBP20.37■□□□□ 0.85
CLDND1-211ENST00000506575 CARMIL3Q8ND23 1372 aa20.37■□□□□ 0.85
CLDND1-211ENST00000506575 SETDB2Q96T68 719 aa20.37■□□□□ 0.85
CLDND1-211ENST00000506575 PIM2Q9P1W9 311 aa20.37■□□□□ 0.85
CLDND1-211ENST00000506575 NPHP1O15259 732 aa20.36■□□□□ 0.85
CLDND1-211ENST00000506575 CLEC4GQ6UXB4 293 aa20.36■□□□□ 0.85
CLDND1-211ENST00000506575 APAF1O14727 1248 aa20.35■□□□□ 0.85
CLDND1-211ENST00000506575 CHRNA5P30532 468 aa20.35■□□□□ 0.85
CLDND1-211ENST00000506575 CCDC184Q52MB2 194 aa20.35■□□□□ 0.85
CLDND1-211ENST00000506575 NGEFQ8N5V2 710 aa20.35■□□□□ 0.85
CLDND1-211ENST00000506575 MYL6BP14649 208 aa20.34■□□□□ 0.85
CLDND1-211ENST00000506575 KCNA3P22001 575 aa20.34■□□□□ 0.85
CLDND1-211ENST00000506575 ZNF784Q8NCA9 323 aaPredicted RBP20.34■□□□□ 0.85
CLDND1-211ENST00000506575 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
CLDND1-211ENST00000506575 ERBB4Q15303 1308 aa20.33■□□□□ 0.85
CLDND1-211ENST00000506575 CHL1O00533 1208 aa20.33■□□□□ 0.85
CLDND1-211ENST00000506575 EIF2S2P20042 333 aaKnown RBP20.33■□□□□ 0.85
CLDND1-211ENST00000506575 DALRD3Q5D0E6 543 aaKnown RBP20.33■□□□□ 0.85
CLDND1-211ENST00000506575 ARFGEF1Q9Y6D6 1849 aa20.32■□□□□ 0.84
CLDND1-211ENST00000506575 RGL2O15211 777 aa20.32■□□□□ 0.84
CLDND1-211ENST00000506575 KIF6Q6ZMV9 814 aa20.32■□□□□ 0.84
CLDND1-211ENST00000506575 CNBD1Q8NA66 436 aa20.32■□□□□ 0.84
CLDND1-211ENST00000506575 ST5P78524 1137 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms