RNA–Protein interactions for RNA: ENST00000506167.5

BRD8-222, Transcript of bromodomain containing 8, human

TSL 5

Gene BRD8, Length 1,363 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD8-222	ENST00000506167	PDZRN3	Q9UPQ7	1066 aa		13.21	□□□□□ -0.29
BRD8-222	ENST00000506167	THRAP3	Q9Y2W1	955 aa	Known RBP	13.21	□□□□□ -0.29
BRD8-222	ENST00000506167	PLCH1	Q4KWH8	1693 aa		13.21	□□□□□ -0.29
BRD8-222	ENST00000506167	BCL9L	Q86UU0	1499 aa		13.21	□□□□□ -0.29
BRD8-222	ENST00000506167	ATP10D	Q9P241	1426 aa		13.21	□□□□□ -0.3
BRD8-222	ENST00000506167	PARP4	Q9UKK3	1724 aa	Known RBP	13.21	□□□□□ -0.3
BRD8-222	ENST00000506167	GNAI2	P04899	355 aa		13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	RGS3	P49796	1198 aa		13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	LARP1	Q6PKG0	1096 aa	Known RBP	13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	STRN4	Q9NRL3	753 aa		13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	SLIT2	O94813	1529 aa		13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	COL14A1	Q05707	1796 aa	Known RBP	13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	KDM3B	Q7LBC6	1761 aa		13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	VIRMA	Q69YN4	1812 aa	Known RBP	13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	EIF2S2	P20042	333 aa	Known RBP	13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	SLC4A10	Q6U841	1118 aa		13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	G2E3	Q7L622	706 aa		13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	NFATC2IP	Q8NCF5	419 aa		13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	BTG4	Q9NY30	223 aa		13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	CHPF2	Q9P2E5	772 aa		13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	USP21	Q9UK80	565 aa		13.2	□□□□□ -0.3
BRD8-222	ENST00000506167	CHD1L	Q86WJ1	897 aa		13.19	□□□□□ -0.3
BRD8-222	ENST00000506167	DNAAF4	Q8WXU2	420 aa		13.19	□□□□□ -0.3
BRD8-222	ENST00000506167	SRCIN1	Q9C0H9	1055 aa		13.19	□□□□□ -0.3
BRD8-222	ENST00000506167	RGPD2	P0DJD1	1756 aa		13.18	□□□□□ -0.3
BRD8-222	ENST00000506167	ALDH1L1	O75891	902 aa		13.18	□□□□□ -0.3
BRD8-222	ENST00000506167	CEP85	Q6P2H3	762 aa		13.18	□□□□□ -0.3
BRD8-222	ENST00000506167	QTRT2	Q9H974	415 aa	Known RBP	13.18	□□□□□ -0.3
BRD8-222	ENST00000506167	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.17	□□□□□ -0.3
BRD8-222	ENST00000506167	KCNQ3	O43525	872 aa		13.17	□□□□□ -0.3
BRD8-222	ENST00000506167	MEIS3	Q99687	375 aa		13.17	□□□□□ -0.3
BRD8-222	ENST00000506167	DCTPP1	Q9H773	170 aa		13.17	□□□□□ -0.3
BRD8-222	ENST00000506167	DISP2	A7MBM2	1401 aa		13.17	□□□□□ -0.3
BRD8-222	ENST00000506167	ATRN	O75882	1429 aa		13.17	□□□□□ -0.3
BRD8-222	ENST00000506167	NRAP	Q86VF7	1730 aa		13.17	□□□□□ -0.3
BRD8-222	ENST00000506167	NWD2	Q9ULI1	1742 aa		13.16	□□□□□ -0.3
BRD8-222	ENST00000506167		F6X3S4	739 aa		13.16	□□□□□ -0.3
BRD8-222	ENST00000506167	UBTFL1	P0CB47	393 aa	Predicted RBP	13.16	□□□□□ -0.3
BRD8-222	ENST00000506167	KSR2	Q6VAB6	950 aa		13.16	□□□□□ -0.3
BRD8-222	ENST00000506167	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.16	□□□□□ -0.3
BRD8-222	ENST00000506167	UPF2	Q9HAU5	1272 aa	Known RBP	13.16	□□□□□ -0.3
BRD8-222	ENST00000506167	MKRN4P	Q13434	485 aa	Predicted RBP	13.15	□□□□□ -0.3
BRD8-222	ENST00000506167	UNC5CL	Q8IV45	518 aa		13.15	□□□□□ -0.3
BRD8-222	ENST00000506167	NECTIN2	Q92692	538 aa		13.15	□□□□□ -0.3
BRD8-222	ENST00000506167	ZNF496	Q96IT1	587 aa	Predicted RBP	13.15	□□□□□ -0.3
BRD8-222	ENST00000506167	SIPA1L3	O60292	1781 aa	Predicted RBP	13.15	□□□□□ -0.3
BRD8-222	ENST00000506167	CACNA1F	O60840	1977 aa		13.15	□□□□□ -0.31
BRD8-222	ENST00000506167	PI4KAP2	A4QPH2	592 aa		13.14	□□□□□ -0.31
BRD8-222	ENST00000506167	RXRB	P28702	533 aa		13.14	□□□□□ -0.31
BRD8-222	ENST00000506167	NEXN	Q0ZGT2	675 aa		13.14	□□□□□ -0.31
BRD8-222	ENST00000506167	C8orf34	Q49A92	452 aa		13.14	□□□□□ -0.31
BRD8-222	ENST00000506167	BEND3	Q5T5X7	828 aa		13.14	□□□□□ -0.31
BRD8-222	ENST00000506167	SIRT2	Q8IXJ6	389 aa		13.14	□□□□□ -0.31
BRD8-222	ENST00000506167	VSIG10	Q8N0Z9	540 aa		13.14	□□□□□ -0.31
BRD8-222	ENST00000506167	PI4KAP1	Q8N8J0	262 aa		13.14	□□□□□ -0.31
BRD8-222	ENST00000506167	DDRGK1	Q96HY6	314 aa		13.14	□□□□□ -0.31
BRD8-222	ENST00000506167	TRPC5	Q9UL62	973 aa	Predicted RBP	13.14	□□□□□ -0.31
BRD8-222	ENST00000506167	GLI3	P10071	1580 aa		13.14	□□□□□ -0.31
BRD8-222	ENST00000506167	RGPD5	Q99666	1765 aa		13.13	□□□□□ -0.31
BRD8-222	ENST00000506167	TNS2	Q63HR2	1409 aa		13.13	□□□□□ -0.31
BRD8-222	ENST00000506167	EXOC5	O00471	708 aa		13.13	□□□□□ -0.31
BRD8-222	ENST00000506167	ANKRD45	Q5TZF3	282 aa		13.13	□□□□□ -0.31
BRD8-222	ENST00000506167	LINS1	Q8NG48	757 aa		13.13	□□□□□ -0.31
BRD8-222	ENST00000506167	DDX54	Q8TDD1	881 aa	Known RBP	13.13	□□□□□ -0.31
BRD8-222	ENST00000506167	C1orf115	Q9H7X2	142 aa		13.13	□□□□□ -0.31
BRD8-222	ENST00000506167	PHAX	Q9H814	394 aa	Known RBP	13.13	□□□□□ -0.31
BRD8-222	ENST00000506167	TMOD3	Q9NYL9	352 aa		13.13	□□□□□ -0.31
BRD8-222	ENST00000506167	RBM6	P78332	1123 aa	Known RBP	13.12	□□□□□ -0.31
BRD8-222	ENST00000506167	ATP8B2	P98198	1209 aa		13.12	□□□□□ -0.31
BRD8-222	ENST00000506167	SLC39A6	Q13433	755 aa		13.12	□□□□□ -0.31
BRD8-222	ENST00000506167	HSP90AB4P	Q58FF6	505 aa		13.12	□□□□□ -0.31
BRD8-222	ENST00000506167	BMP2KL	Q5H9B9	411 aa		13.12	□□□□□ -0.31
BRD8-222	ENST00000506167	SCN11A	Q9UI33	1791 aa		13.11	□□□□□ -0.31
BRD8-222	ENST00000506167	ADCY9	O60503	1353 aa		13.11	□□□□□ -0.31
BRD8-222	ENST00000506167	BARGIN	Q6ZT62	677 aa		13.11	□□□□□ -0.31
BRD8-222	ENST00000506167	USP44	Q9H0E7	712 aa		13.11	□□□□□ -0.31
BRD8-222	ENST00000506167	SPATA31A1	Q5TZJ5	1347 aa		13.11	□□□□□ -0.31
BRD8-222	ENST00000506167	RAB11FIP3	O75154	756 aa		13.1	□□□□□ -0.31
BRD8-222	ENST00000506167	PDIA6	Q15084	440 aa		13.1	□□□□□ -0.31
BRD8-222	ENST00000506167	VPS72	Q15906	364 aa		13.1	□□□□□ -0.31
BRD8-222	ENST00000506167	RIC3	Q7Z5B4	369 aa		13.1	□□□□□ -0.31
BRD8-222	ENST00000506167	GJD4	Q96KN9	370 aa	Predicted RBP	13.1	□□□□□ -0.31
BRD8-222	ENST00000506167	LNPK	Q9C0E8	428 aa		13.1	□□□□□ -0.31
BRD8-222	ENST00000506167	MAP3K2	Q9Y2U5	619 aa		13.1	□□□□□ -0.31
BRD8-222	ENST00000506167	UTY	O14607	1347 aa		13.1	□□□□□ -0.31
BRD8-222	ENST00000506167	MTX1	Q13505	466 aa		13.09	□□□□□ -0.31
BRD8-222	ENST00000506167	SOCS7	O14512	581 aa		13.08	□□□□□ -0.31
BRD8-222	ENST00000506167	ANKRD13D	Q6ZTN6	518 aa		13.08	□□□□□ -0.31
BRD8-222	ENST00000506167	SKAP1	Q86WV1	359 aa		13.08	□□□□□ -0.31
BRD8-222	ENST00000506167	SSH3	Q8TE77	659 aa		13.08	□□□□□ -0.31
BRD8-222	ENST00000506167	IPO9	Q96P70	1041 aa	Known RBP	13.08	□□□□□ -0.31
BRD8-222	ENST00000506167	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.08	□□□□□ -0.31
BRD8-222	ENST00000506167	USP35	Q9P2H5	1018 aa		13.08	□□□□□ -0.31
BRD8-222	ENST00000506167	CCDC9	Q9Y3X0	531 aa	Known RBP	13.08	□□□□□ -0.31
BRD8-222	ENST00000506167	SPATA31A5	Q5VU36	1347 aa		13.08	□□□□□ -0.32
BRD8-222	ENST00000506167	SPATA31A7	Q8IWB4	1347 aa		13.08	□□□□□ -0.32
BRD8-222	ENST00000506167	COL15A1	P39059	1388 aa		13.08	□□□□□ -0.32

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