RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 EYA1Q99502 592 aa12.79□□□□□ -0.36
PTPN20-216ENST00000506080 ATG3Q9NT62 314 aa12.79□□□□□ -0.36
PTPN20-216ENST00000506080 TOMM70O94826 608 aa12.78□□□□□ -0.36
PTPN20-216ENST00000506080 PHKG2P15735 406 aa12.78□□□□□ -0.36
PTPN20-216ENST00000506080 TGFB2P61812 414 aa12.78□□□□□ -0.36
PTPN20-216ENST00000506080 TRAPPC3LQ5T215 181 aa12.78□□□□□ -0.36
PTPN20-216ENST00000506080 N4BP2Q86UW6 1770 aaPredicted RBP12.78□□□□□ -0.36
PTPN20-216ENST00000506080 NMRK2Q9NPI5 230 aa12.78□□□□□ -0.36
PTPN20-216ENST00000506080 RTCBQ9Y3I0 505 aaKnown RBP12.78□□□□□ -0.36
PTPN20-216ENST00000506080 DPEP1P16444 411 aa12.77□□□□□ -0.37
PTPN20-216ENST00000506080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.37
PTPN20-216ENST00000506080 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
PTPN20-216ENST00000506080 WASHC2AQ641Q2 1341 aa12.76□□□□□ -0.37
PTPN20-216ENST00000506080 FCHSD2O94868 740 aa12.76□□□□□ -0.37
PTPN20-216ENST00000506080 SEC24BO95487 1268 aa12.76□□□□□ -0.37
PTPN20-216ENST00000506080 CDCA8Q53HL2 280 aa12.76□□□□□ -0.37
PTPN20-216ENST00000506080 NLGN1Q8N2Q7 840 aa12.76□□□□□ -0.37
PTPN20-216ENST00000506080 DNAJC5GQ8N7S2 189 aa12.76□□□□□ -0.37
PTPN20-216ENST00000506080 ARHGEF1Q92888 912 aaKnown RBP12.76□□□□□ -0.37
PTPN20-216ENST00000506080 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
PTPN20-216ENST00000506080 C10orf71Q711Q0 1435 aa12.75□□□□□ -0.37
PTPN20-216ENST00000506080 KIF13BQ9NQT8 1826 aa12.75□□□□□ -0.37
PTPN20-216ENST00000506080 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
PTPN20-216ENST00000506080 GYS1P13807 737 aa12.74□□□□□ -0.37
PTPN20-216ENST00000506080 PARP3Q9Y6F1 533 aa12.74□□□□□ -0.37
PTPN20-216ENST00000506080 KDRP35968 1356 aa12.74□□□□□ -0.37
PTPN20-216ENST00000506080 RFC4P35249 363 aa12.73□□□□□ -0.37
PTPN20-216ENST00000506080 HTRA3P83110 453 aa12.73□□□□□ -0.37
PTPN20-216ENST00000506080 IER5LQ5T953 404 aa12.73□□□□□ -0.37
PTPN20-216ENST00000506080 C9orf131Q5VYM1 1079 aa12.73□□□□□ -0.37
PTPN20-216ENST00000506080 POLKQ9UBT6 870 aa12.73□□□□□ -0.37
PTPN20-216ENST00000506080 ANKRD26Q9UPS8 1709 aa12.72□□□□□ -0.37
PTPN20-216ENST00000506080 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
PTPN20-216ENST00000506080 EIF4A2Q14240 407 aaKnown RBP12.72□□□□□ -0.37
PTPN20-216ENST00000506080 C16orf71Q8IYS4 520 aaPredicted RBP12.72□□□□□ -0.37
PTPN20-216ENST00000506080 C4AP0C0L4 1744 aa12.72□□□□□ -0.37
PTPN20-216ENST00000506080 RPS6KA4O75676 772 aa12.71□□□□□ -0.37
PTPN20-216ENST00000506080 KCNA3P22001 575 aa12.71□□□□□ -0.37
PTPN20-216ENST00000506080 RC3H1Q5TC82 1133 aaKnown RBP12.71□□□□□ -0.37
PTPN20-216ENST00000506080 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.37
PTPN20-216ENST00000506080 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
PTPN20-216ENST00000506080 CNTNAP4Q9C0A0 1308 aa12.71□□□□□ -0.38
PTPN20-216ENST00000506080 ERVV-2B6SEH9 535 aa12.71□□□□□ -0.38
PTPN20-216ENST00000506080 CHRM1P11229 460 aaPredicted RBP12.71□□□□□ -0.38
PTPN20-216ENST00000506080 MAMSTRQ6ZN01 415 aa12.71□□□□□ -0.38
PTPN20-216ENST00000506080 WDR90Q96KV7 1748 aa12.7□□□□□ -0.38
PTPN20-216ENST00000506080 DCAF5Q96JK2 942 aa12.7□□□□□ -0.38
PTPN20-216ENST00000506080 PIM2Q9P1W9 311 aa12.7□□□□□ -0.38
PTPN20-216ENST00000506080 SRP68Q9UHB9 627 aaKnown RBP12.7□□□□□ -0.38
PTPN20-216ENST00000506080 KCPQ6ZWJ8 1503 aa12.69□□□□□ -0.38
PTPN20-216ENST00000506080 PTCD1O75127 700 aaKnown RBP12.69□□□□□ -0.38
PTPN20-216ENST00000506080 HSP90AB1P08238 724 aaKnown RBP12.69□□□□□ -0.38
PTPN20-216ENST00000506080 CABP4P57796 275 aa12.69□□□□□ -0.38
PTPN20-216ENST00000506080 ZNF530Q6P9A1 599 aaPredicted RBP12.69□□□□□ -0.38
PTPN20-216ENST00000506080 KLRG1Q96E93 195 aa12.69□□□□□ -0.38
PTPN20-216ENST00000506080 POLR3GLQ9BT43 218 aa12.69□□□□□ -0.38
PTPN20-216ENST00000506080 RNF181Q9P0P0 153 aa12.69□□□□□ -0.38
PTPN20-216ENST00000506080 BRCA1P38398 1863 aaKnown RBP12.69□□□□□ -0.38
PTPN20-216ENST00000506080 PLEKHG2Q9H7P9 1386 aa12.69□□□□□ -0.38
PTPN20-216ENST00000506080 COL5A3P25940 1745 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-216ENST00000506080 PLEKHO1Q53GL0 409 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-216ENST00000506080 DALRD3Q5D0E6 543 aaKnown RBP12.68□□□□□ -0.38
PTPN20-216ENST00000506080 COL13A1Q5TAT6 717 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-216ENST00000506080 RRAGCQ9HB90 399 aa12.68□□□□□ -0.38
PTPN20-216ENST00000506080 ZNF831Q5JPB2 1677 aa12.67□□□□□ -0.38
PTPN20-216ENST00000506080 MYH14Q7Z406 1995 aaKnown RBP12.67□□□□□ -0.38
PTPN20-216ENST00000506080 KDM6AO15550 1401 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-216ENST00000506080 CHRNA5P30532 468 aa12.67□□□□□ -0.38
PTPN20-216ENST00000506080 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
PTPN20-216ENST00000506080 DDR1Q08345 913 aa12.67□□□□□ -0.38
PTPN20-216ENST00000506080 FSTL1Q12841 308 aa12.67□□□□□ -0.38
PTPN20-216ENST00000506080 ZNF467Q7Z7K2 595 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-216ENST00000506080 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
PTPN20-216ENST00000506080 KDM2BQ8NHM5 1336 aa12.66□□□□□ -0.38
PTPN20-216ENST00000506080 ARFGEF1Q9Y6D6 1849 aa12.66□□□□□ -0.38
PTPN20-216ENST00000506080 USP42Q9H9J4 1324 aaKnown RBP12.66□□□□□ -0.38
PTPN20-216ENST00000506080 MTHFSP49914 203 aa12.65□□□□□ -0.38
PTPN20-216ENST00000506080 JMYQ8N9B5 988 aa12.65□□□□□ -0.38
PTPN20-216ENST00000506080 IRX5P78411 483 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-216ENST00000506080 RASSF7Q02833 373 aa12.64□□□□□ -0.39
PTPN20-216ENST00000506080 AMOTQ4VCS5 1084 aa12.64□□□□□ -0.39
PTPN20-216ENST00000506080 C1orf141Q5JVX7 400 aa12.64□□□□□ -0.39
PTPN20-216ENST00000506080 AEBP1Q8IUX7 1158 aa12.64□□□□□ -0.39
PTPN20-216ENST00000506080 NFATC2IPQ8NCF5 419 aa12.64□□□□□ -0.39
PTPN20-216ENST00000506080 POLRMTO00411 1230 aaKnown RBP12.63□□□□□ -0.39
PTPN20-216ENST00000506080 PLCG2P16885 1265 aa12.62□□□□□ -0.39
PTPN20-216ENST00000506080 USPL1Q5W0Q7 1092 aa12.62□□□□□ -0.39
PTPN20-216ENST00000506080 ZPR1O75312 459 aa12.62□□□□□ -0.39
PTPN20-216ENST00000506080 TM4SF1P30408 202 aa12.62□□□□□ -0.39
PTPN20-216ENST00000506080 INTS5Q6P9B9 1019 aaKnown RBP12.62□□□□□ -0.39
PTPN20-216ENST00000506080 TNS4Q8IZW8 715 aa12.62□□□□□ -0.39
PTPN20-216ENST00000506080 SMC1BQ8NDV3 1235 aa12.62□□□□□ -0.39
PTPN20-216ENST00000506080 TJP1Q07157 1748 aa12.61□□□□□ -0.39
PTPN20-216ENST00000506080 SULT6B1Q6IMI4 303 aa12.61□□□□□ -0.39
PTPN20-216ENST00000506080 DNAJC10Q8IXB1 793 aa12.61□□□□□ -0.39
PTPN20-216ENST00000506080 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
PTPN20-216ENST00000506080 SBF1O95248 1867 aa12.61□□□□□ -0.39
PTPN20-216ENST00000506080 PSEN1P49768 467 aa12.6□□□□□ -0.39
PTPN20-216ENST00000506080 PRELPP51888 382 aa12.59□□□□□ -0.39
PTPN20-216ENST00000506080 SOS1Q07889 1333 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms