RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 NARFQ9UHQ1 456 aa29.79■■■□□ 2.36
SUDS3P1-201ENST00000505831 ZBTB1Q9Y2K1 713 aa29.79■■■□□ 2.36
SUDS3P1-201ENST00000505831 USPL1Q5W0Q7 1092 aa29.78■■■□□ 2.36
SUDS3P1-201ENST00000505831 POLRMTO00411 1230 aaKnown RBP29.77■■■□□ 2.36
SUDS3P1-201ENST00000505831 ZPR1O75312 459 aa29.77■■■□□ 2.36
SUDS3P1-201ENST00000505831 PRKAR2BP31323 418 aa29.77■■■□□ 2.36
SUDS3P1-201ENST00000505831 TEFQ10587 303 aa29.77■■■□□ 2.36
SUDS3P1-201ENST00000505831 ZNF790Q6PG37 636 aa29.77■■■□□ 2.36
SUDS3P1-201ENST00000505831 ZNF496Q96IT1 587 aaPredicted RBP29.77■■■□□ 2.36
SUDS3P1-201ENST00000505831 COL15A1P39059 1388 aa29.77■■■□□ 2.36
SUDS3P1-201ENST00000505831 SBF1O95248 1867 aa29.76■■■□□ 2.35
SUDS3P1-201ENST00000505831 TTC5Q8N0Z6 440 aa29.75■■■□□ 2.35
SUDS3P1-201ENST00000505831 BCL2L12Q9HB09 334 aa29.75■■■□□ 2.35
SUDS3P1-201ENST00000505831 NUDCQ9Y266 331 aa29.75■■■□□ 2.35
SUDS3P1-201ENST00000505831 BCS1LQ9Y276 419 aa29.75■■■□□ 2.35
SUDS3P1-201ENST00000505831 DLG5Q8TDM6 1919 aa29.74■■■□□ 2.35
SUDS3P1-201ENST00000505831 HEG1Q9ULI3 1381 aa29.74■■■□□ 2.35
SUDS3P1-201ENST00000505831 EIF5P55010 431 aaKnown RBP29.73■■■□□ 2.35
SUDS3P1-201ENST00000505831 FCHSD2O94868 740 aa29.72■■■□□ 2.35
SUDS3P1-201ENST00000505831 STARD3NLO95772 234 aa29.72■■■□□ 2.35
SUDS3P1-201ENST00000505831 DLEC1Q9Y238 1755 aa29.72■■■□□ 2.35
SUDS3P1-201ENST00000505831 NFIXQ14938 502 aa29.71■■■□□ 2.35
SUDS3P1-201ENST00000505831 TEX13AQ9BXU3 409 aaPredicted RBP29.71■■■□□ 2.35
SUDS3P1-201ENST00000505831 GPBP1L1Q9HC44 474 aaPredicted RBP29.71■■■□□ 2.35
SUDS3P1-201ENST00000505831 U2AF1L5P0DN76 240 aaPredicted RBP29.7■■■□□ 2.35
SUDS3P1-201ENST00000505831 CANXP27824 592 aaKnown RBP29.7■■■□□ 2.35
SUDS3P1-201ENST00000505831 U2AF1Q01081 240 aaKnown RBP eCLIP29.7■■■□□ 2.35
SUDS3P1-201ENST00000505831 PIM2Q9P1W9 311 aa29.7■■■□□ 2.35
SUDS3P1-201ENST00000505831 CEP350Q5VT06 3117 aa29.69■■■□□ 2.34
SUDS3P1-201ENST00000505831 SENP3-EIF4A1A0A087X0R7 540 aa29.67■■■□□ 2.34
SUDS3P1-201ENST00000505831 KCNQ3O43525 872 aa29.67■■■□□ 2.34
SUDS3P1-201ENST00000505831 ARHGAP27Q6ZUM4 889 aa29.67■■■□□ 2.34
SUDS3P1-201ENST00000505831 FMNL2Q96PY5 1086 aa29.67■■■□□ 2.34
SUDS3P1-201ENST00000505831 SCN7AQ01118 1682 aa29.66■■■□□ 2.34
SUDS3P1-201ENST00000505831 ANKRD31Q8N7Z5 1873 aa29.65■■■□□ 2.34
SUDS3P1-201ENST00000505831 BTBD11A6QL63 1104 aa29.65■■■□□ 2.34
SUDS3P1-201ENST00000505831 CHRNA5P30532 468 aa29.65■■■□□ 2.34
SUDS3P1-201ENST00000505831 CCDC88AQ3V6T2 1871 aa29.65■■■□□ 2.34
SUDS3P1-201ENST00000505831 A0A087WZG4 1122 aa29.64■■■□□ 2.34
SUDS3P1-201ENST00000505831 ZNF526Q8TF50 670 aaPredicted RBP29.64■■■□□ 2.34
SUDS3P1-201ENST00000505831 SERPINB2P05120 415 aa29.63■■■□□ 2.33
SUDS3P1-201ENST00000505831 IL6STP40189 918 aaPredicted RBP29.63■■■□□ 2.33
SUDS3P1-201ENST00000505831 DALRD3Q5D0E6 543 aaKnown RBP29.63■■■□□ 2.33
SUDS3P1-201ENST00000505831 HTATSF1O43719 755 aaKnown RBP29.62■■■□□ 2.33
SUDS3P1-201ENST00000505831 BCORQ6W2J9 1755 aa29.62■■■□□ 2.33
SUDS3P1-201ENST00000505831 A1BGP04217 495 aa29.61■■■□□ 2.33
SUDS3P1-201ENST00000505831 MCM10Q7L590 875 aa29.61■■■□□ 2.33
SUDS3P1-201ENST00000505831 RTF1Q92541 710 aaKnown RBP29.59■■■□□ 2.33
SUDS3P1-201ENST00000505831 USP16Q9Y5T5 823 aa29.59■■■□□ 2.33
SUDS3P1-201ENST00000505831 KIF3CO14782 793 aa29.58■■■□□ 2.33
SUDS3P1-201ENST00000505831 TBC1D2BQ9UPU7 963 aa29.58■■■□□ 2.33
SUDS3P1-201ENST00000505831 DCTN1Q14203 1278 aa29.57■■■□□ 2.32
SUDS3P1-201ENST00000505831 TBC1D9BQ66K14 1250 aa29.57■■■□□ 2.32
SUDS3P1-201ENST00000505831 KDM3BQ7LBC6 1761 aa29.54■■■□□ 2.32
SUDS3P1-201ENST00000505831 CARMIL3Q8ND23 1372 aa29.54■■■□□ 2.32
SUDS3P1-201ENST00000505831 PRAMEF22A3QJZ6 481 aa29.54■■■□□ 2.32
SUDS3P1-201ENST00000505831 PLEKHF1Q96S99 279 aa29.54■■■□□ 2.32
SUDS3P1-201ENST00000505831 CAMTA2O94983 1202 aa29.53■■■□□ 2.32
SUDS3P1-201ENST00000505831 SNRPA1P09661 255 aaKnown RBP29.53■■■□□ 2.32
SUDS3P1-201ENST00000505831 C9orf131Q5VYM1 1079 aa29.53■■■□□ 2.32
SUDS3P1-201ENST00000505831 BICDL1Q6ZP65 573 aa29.53■■■□□ 2.32
SUDS3P1-201ENST00000505831 TAF7Q15545 349 aaPredicted RBP29.52■■■□□ 2.32
SUDS3P1-201ENST00000505831 COL11A2P13942 1736 aaPredicted RBP29.51■■■□□ 2.32
SUDS3P1-201ENST00000505831 ZNF330Q9Y3S2 320 aaPredicted RBP29.51■■■□□ 2.31
SUDS3P1-201ENST00000505831 LAMB4A4D0S4 1761 aa29.51■■■□□ 2.31
SUDS3P1-201ENST00000505831 CACNA1SQ13698 1873 aa29.49■■■□□ 2.31
SUDS3P1-201ENST00000505831 C2CD5Q86YS7 1000 aa29.49■■■□□ 2.31
SUDS3P1-201ENST00000505831 DICER1Q9UPY3 1922 aaKnown RBP29.49■■■□□ 2.31
SUDS3P1-201ENST00000505831 FER1L6Q2WGJ9 1857 aa29.48■■■□□ 2.31
SUDS3P1-201ENST00000505831 H0YIN7 160 aa29.48■■■□□ 2.31
SUDS3P1-201ENST00000505831 PRR5LQ6MZQ0 368 aa29.48■■■□□ 2.31
SUDS3P1-201ENST00000505831 TTLL6Q8N841 843 aa29.48■■■□□ 2.31
SUDS3P1-201ENST00000505831 BRIP1Q9BX63 1249 aa29.48■■■□□ 2.31
SUDS3P1-201ENST00000505831 PIP4K2AP48426 406 aaPredicted RBP29.47■■■□□ 2.31
SUDS3P1-201ENST00000505831 DZIP3Q86Y13 1208 aaKnown RBP29.47■■■□□ 2.31
SUDS3P1-201ENST00000505831 NBPF26B4DH59 902 aa29.46■■■□□ 2.31
SUDS3P1-201ENST00000505831 NBPF10Q6P3W6 841 aaKnown RBP29.46■■■□□ 2.31
SUDS3P1-201ENST00000505831 NBPF15Q8N660 670 aa29.46■■■□□ 2.31
SUDS3P1-201ENST00000505831 ARFGEF2Q9Y6D5 1785 aa29.45■■■□□ 2.31
SUDS3P1-201ENST00000505831 HSPA6P17066 643 aa29.45■■■□□ 2.31
SUDS3P1-201ENST00000505831 CLEC4GQ6UXB4 293 aa29.45■■■□□ 2.31
SUDS3P1-201ENST00000505831 NPM2Q86SE8 214 aaKnown RBP29.45■■■□□ 2.31
SUDS3P1-201ENST00000505831 SETDB2Q96T68 719 aa29.45■■■□□ 2.31
SUDS3P1-201ENST00000505831 NMRK2Q9NPI5 230 aa29.45■■■□□ 2.31
SUDS3P1-201ENST00000505831 MIS18AQ9NYP9 233 aa29.45■■■□□ 2.31
SUDS3P1-201ENST00000505831 RNF181Q9P0P0 153 aa29.45■■■□□ 2.31
SUDS3P1-201ENST00000505831 PDZRN3Q9UPQ7 1066 aa29.45■■■□□ 2.31
SUDS3P1-201ENST00000505831 NUP98P52948 1817 aa29.45■■■□□ 2.3
SUDS3P1-201ENST00000505831 SLX4Q8IY92 1834 aa29.45■■■□□ 2.3
SUDS3P1-201ENST00000505831 NEFMP07197 916 aa29.43■■■□□ 2.3
SUDS3P1-201ENST00000505831 PDE6BP35913 854 aa29.43■■■□□ 2.3
SUDS3P1-201ENST00000505831 PRELPP51888 382 aa29.43■■■□□ 2.3
SUDS3P1-201ENST00000505831 NFE2L2Q16236 605 aa29.43■■■□□ 2.3
SUDS3P1-201ENST00000505831 RGL2O15211 777 aa29.42■■■□□ 2.3
SUDS3P1-201ENST00000505831 TOMM70O94826 608 aa29.42■■■□□ 2.3
SUDS3P1-201ENST00000505831 CCDC24Q8N4L8 307 aa29.42■■■□□ 2.3
SUDS3P1-201ENST00000505831 TNRC6CQ9HCJ0 1690 aaKnown RBP29.41■■■□□ 2.3
SUDS3P1-201ENST00000505831 RASSF7Q02833 373 aa29.4■■■□□ 2.3
SUDS3P1-201ENST00000505831 RALBP1Q15311 655 aa29.4■■■□□ 2.3
SUDS3P1-201ENST00000505831 PNISRQ8TF01 805 aaKnown RBP29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms