RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 MRC1P22897 1456 aa15.84■□□□□ 0.13
PRDM2-214ENST00000505823 MMP10P09238 476 aa15.84■□□□□ 0.13
PRDM2-214ENST00000505823 PNISRQ8TF01 805 aaKnown RBP15.84■□□□□ 0.13
PRDM2-214ENST00000505823 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
PRDM2-214ENST00000505823 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
PRDM2-214ENST00000505823 CYP19A1P11511 503 aaPredicted RBP15.82■□□□□ 0.12
PRDM2-214ENST00000505823 LMOD3Q0VAK6 560 aa15.82■□□□□ 0.12
PRDM2-214ENST00000505823 CEMIPQ8WUJ3 1361 aa15.82■□□□□ 0.12
PRDM2-214ENST00000505823 TAF7Q15545 349 aaPredicted RBP15.81■□□□□ 0.12
PRDM2-214ENST00000505823 COL24A1Q17RW2 1714 aa15.81■□□□□ 0.12
PRDM2-214ENST00000505823 AMIGO3Q86WK7 504 aa15.81■□□□□ 0.12
PRDM2-214ENST00000505823 HEG1Q9ULI3 1381 aa15.8■□□□□ 0.12
PRDM2-214ENST00000505823 GYS1P13807 737 aa15.8■□□□□ 0.12
PRDM2-214ENST00000505823 NFE2L2Q16236 605 aa15.8■□□□□ 0.12
PRDM2-214ENST00000505823 INTS5Q6P9B9 1019 aaKnown RBP15.8■□□□□ 0.12
PRDM2-214ENST00000505823 SMIM5Q71RC9 77 aa15.8■□□□□ 0.12
PRDM2-214ENST00000505823 MCM10Q7L590 875 aa15.8■□□□□ 0.12
PRDM2-214ENST00000505823 ZNF496Q96IT1 587 aaPredicted RBP15.8■□□□□ 0.12
PRDM2-214ENST00000505823 USP42Q9H9J4 1324 aaKnown RBP15.79■□□□□ 0.12
PRDM2-214ENST00000505823 SNRPA1P09661 255 aaKnown RBP15.79■□□□□ 0.12
PRDM2-214ENST00000505823 CANXP27824 592 aaKnown RBP15.79■□□□□ 0.12
PRDM2-214ENST00000505823 TGFB2P61812 414 aa15.79■□□□□ 0.12
PRDM2-214ENST00000505823 NLGN2Q8NFZ4 835 aa15.79■□□□□ 0.12
PRDM2-214ENST00000505823 NARFQ9UHQ1 456 aa15.79■□□□□ 0.12
PRDM2-214ENST00000505823 SOS1Q07889 1333 aaPredicted RBP15.78■□□□□ 0.12
PRDM2-214ENST00000505823 ADAMTS7Q9UKP4 1686 aa15.78■□□□□ 0.12
PRDM2-214ENST00000505823 COL5A3P25940 1745 aaPredicted RBP15.77■□□□□ 0.12
PRDM2-214ENST00000505823 IL6STP40189 918 aaPredicted RBP15.77■□□□□ 0.12
PRDM2-214ENST00000505823 ZNF330Q9Y3S2 320 aaPredicted RBP15.77■□□□□ 0.12
PRDM2-214ENST00000505823 COL15A1P39059 1388 aa15.76■□□□□ 0.11
PRDM2-214ENST00000505823 ZBTB1Q9Y2K1 713 aa15.76■□□□□ 0.11
PRDM2-214ENST00000505823 CICQ96RK0 1608 aaPredicted RBP15.76■□□□□ 0.11
PRDM2-214ENST00000505823 KCPQ6ZWJ8 1503 aa15.75■□□□□ 0.11
PRDM2-214ENST00000505823 USPL1Q5W0Q7 1092 aa15.75■□□□□ 0.11
PRDM2-214ENST00000505823 PLEKHF1Q96S99 279 aa15.75■□□□□ 0.11
PRDM2-214ENST00000505823 PRKRIP1Q9H875 184 aaPredicted RBP15.75■□□□□ 0.11
PRDM2-214ENST00000505823 VIRMAQ69YN4 1812 aaKnown RBP15.74■□□□□ 0.11
PRDM2-214ENST00000505823 NPHP1O15259 732 aa15.74■□□□□ 0.11
PRDM2-214ENST00000505823 EIF5P55010 431 aaKnown RBP15.74■□□□□ 0.11
PRDM2-214ENST00000505823 RIPK4P57078 832 aa15.74■□□□□ 0.11
PRDM2-214ENST00000505823 DCTN1Q14203 1278 aa15.74■□□□□ 0.11
PRDM2-214ENST00000505823 FKBP8Q14318 412 aa15.74■□□□□ 0.11
PRDM2-214ENST00000505823 SRP68Q9UHB9 627 aaKnown RBP15.74■□□□□ 0.11
PRDM2-214ENST00000505823 RUNDC1Q96C34 613 aa15.73■□□□□ 0.11
PRDM2-214ENST00000505823 BABAM1Q9NWV8 329 aa15.73■□□□□ 0.11
PRDM2-214ENST00000505823 ZNF652Q9Y2D9 606 aa15.73■□□□□ 0.11
PRDM2-214ENST00000505823 MYH14Q7Z406 1995 aaKnown RBP15.73■□□□□ 0.11
PRDM2-214ENST00000505823 TJP1Q07157 1748 aa15.72■□□□□ 0.11
PRDM2-214ENST00000505823 ZNF316A6NFI3 1004 aaPredicted RBP15.71■□□□□ 0.11
PRDM2-214ENST00000505823 TM4SF1P30408 202 aa15.71■□□□□ 0.11
PRDM2-214ENST00000505823 PIM2Q9P1W9 311 aa15.71■□□□□ 0.11
PRDM2-214ENST00000505823 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.11
PRDM2-214ENST00000505823 UBR2Q8IWV8 1755 aa15.7■□□□□ 0.1
PRDM2-214ENST00000505823 KCNQ3O43525 872 aa15.7■□□□□ 0.1
PRDM2-214ENST00000505823 SETDB2Q96T68 719 aa15.7■□□□□ 0.1
PRDM2-214ENST00000505823 TSPYL4Q9UJ04 414 aa15.7■□□□□ 0.1
PRDM2-214ENST00000505823 BCS1LQ9Y276 419 aa15.7■□□□□ 0.1
PRDM2-214ENST00000505823 CHD4Q14839 1912 aa15.69■□□□□ 0.1
PRDM2-214ENST00000505823 A0A0G2JLW4 131 aa15.69■□□□□ 0.1
PRDM2-214ENST00000505823 A1BGP04217 495 aa15.69■□□□□ 0.1
PRDM2-214ENST00000505823 SERPINB2P05120 415 aa15.69■□□□□ 0.1
PRDM2-214ENST00000505823 YBX3P16989 372 aaKnown RBP eCLIP15.69■□□□□ 0.1
PRDM2-214ENST00000505823 TMPOP42166 694 aaKnown RBP15.69■□□□□ 0.1
PRDM2-214ENST00000505823 CALD1Q05682 793 aaKnown RBP15.69■□□□□ 0.1
PRDM2-214ENST00000505823 NFIXQ14938 502 aa15.69■□□□□ 0.1
PRDM2-214ENST00000505823 DZIP3Q86Y13 1208 aaKnown RBP15.69■□□□□ 0.1
PRDM2-214ENST00000505823 TBC1D2BQ9UPU7 963 aa15.69■□□□□ 0.1
PRDM2-214ENST00000505823 C10orf71Q711Q0 1435 aa15.68■□□□□ 0.1
PRDM2-214ENST00000505823 POLRMTO00411 1230 aaKnown RBP15.68■□□□□ 0.1
PRDM2-214ENST00000505823 RGL2O15211 777 aa15.68■□□□□ 0.1
PRDM2-214ENST00000505823 ANP32CO43423 234 aa15.68■□□□□ 0.1
PRDM2-214ENST00000505823 DPEP1P16444 411 aa15.68■□□□□ 0.1
PRDM2-214ENST00000505823 NEUROD2Q15784 382 aa15.68■□□□□ 0.1
PRDM2-214ENST00000505823 DALRD3Q5D0E6 543 aaKnown RBP15.68■□□□□ 0.1
PRDM2-214ENST00000505823 CLEC4GQ6UXB4 293 aa15.68■□□□□ 0.1
PRDM2-214ENST00000505823 BICDL1Q6ZP65 573 aa15.68■□□□□ 0.1
PRDM2-214ENST00000505823 MIS18AQ9NYP9 233 aa15.68■□□□□ 0.1
PRDM2-214ENST00000505823 USP16Q9Y5T5 823 aa15.68■□□□□ 0.1
PRDM2-214ENST00000505823 C4AP0C0L4 1744 aa15.68■□□□□ 0.1
PRDM2-214ENST00000505823 SIPA1L3O60292 1781 aaPredicted RBP15.67■□□□□ 0.1
PRDM2-214ENST00000505823 H0YIN7 160 aa15.67■□□□□ 0.1
PRDM2-214ENST00000505823 DDR1Q08345 913 aa15.67■□□□□ 0.1
PRDM2-214ENST00000505823 ADAMTS8Q9UP79 889 aa15.67■□□□□ 0.1
PRDM2-214ENST00000505823 PDE6BP35913 854 aa15.66■□□□□ 0.1
PRDM2-214ENST00000505823 ST5P78524 1137 aa15.66■□□□□ 0.1
PRDM2-214ENST00000505823 KIF6Q6ZMV9 814 aa15.66■□□□□ 0.1
PRDM2-214ENST00000505823 CCDC146Q8IYE0 955 aa15.66■□□□□ 0.1
PRDM2-214ENST00000505823 CHMP4AQ9BY43 222 aa15.66■□□□□ 0.1
PRDM2-214ENST00000505823 ZBTB12Q9Y330 459 aaPredicted RBP15.66■□□□□ 0.1
PRDM2-214ENST00000505823 CARMIL3Q8ND23 1372 aa15.65■□□□□ 0.1
PRDM2-214ENST00000505823 GIGYF1O75420 1035 aaPredicted RBP15.65■□□□□ 0.1
PRDM2-214ENST00000505823 EIF4A1P60842 406 aaKnown RBP15.65■□□□□ 0.1
PRDM2-214ENST00000505823 ARHGAP27Q6ZUM4 889 aa15.65■□□□□ 0.1
PRDM2-214ENST00000505823 ZNF784Q8NCA9 323 aaPredicted RBP15.65■□□□□ 0.1
PRDM2-214ENST00000505823 ERBB4Q15303 1308 aa15.65■□□□□ 0.1
PRDM2-214ENST00000505823 CNBD1Q8NA66 436 aa15.64■□□□□ 0.09
PRDM2-214ENST00000505823 THUMPD2Q9BTF0 503 aaKnown RBP15.64■□□□□ 0.09
PRDM2-214ENST00000505823 WWC3Q9ULE0 1092 aa15.64■□□□□ 0.09
PRDM2-214ENST00000505823 PXDNLA1KZ92 1463 aa15.64■□□□□ 0.09
PRDM2-214ENST00000505823 GTF2E1P29083 439 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms