RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 CRKLP46109 303 aaKnown RBP20.53■□□□□ 0.88
AFF1-205ENST00000504956 C8orf58Q8NAV2 365 aa20.53■□□□□ 0.88
AFF1-205ENST00000504956 C4AP0C0L4 1744 aa20.52■□□□□ 0.88
AFF1-205ENST00000504956 DUSP27Q5VZP5 1158 aa20.52■□□□□ 0.88
AFF1-205ENST00000504956 AK7Q96M32 723 aa20.52■□□□□ 0.88
AFF1-205ENST00000504956 TEX13AQ9BXU3 409 aaPredicted RBP20.52■□□□□ 0.88
AFF1-205ENST00000504956 CNTNAP4Q9C0A0 1308 aa20.52■□□□□ 0.87
AFF1-205ENST00000504956 STARD3NLO95772 234 aa20.51■□□□□ 0.87
AFF1-205ENST00000504956 EXOSC9Q06265 439 aaKnown RBP20.51■□□□□ 0.87
AFF1-205ENST00000504956 TSPYL6Q8N831 410 aa20.51■□□□□ 0.87
AFF1-205ENST00000504956 AKT1S1Q96B36 256 aa20.51■□□□□ 0.87
AFF1-205ENST00000504956 STK32BQ9NY57 414 aa20.51■□□□□ 0.87
AFF1-205ENST00000504956 EIF2S2P20042 333 aaKnown RBP20.51■□□□□ 0.87
AFF1-205ENST00000504956 NECTIN2Q92692 538 aa20.51■□□□□ 0.87
AFF1-205ENST00000504956 CCDC87Q9NVE4 849 aa20.51■□□□□ 0.87
AFF1-205ENST00000504956 GNPATO15228 680 aa20.5■□□□□ 0.87
AFF1-205ENST00000504956 PIP4K2AP48426 406 aaPredicted RBP20.5■□□□□ 0.87
AFF1-205ENST00000504956 SLC15A2Q16348 729 aa20.5■□□□□ 0.87
AFF1-205ENST00000504956 NBPF14Q5TI25 921 aa20.5■□□□□ 0.87
AFF1-205ENST00000504956 SMIM5Q71RC9 77 aa20.5■□□□□ 0.87
AFF1-205ENST00000504956 ZBTB1Q9Y2K1 713 aa20.5■□□□□ 0.87
AFF1-205ENST00000504956 A1BGP04217 495 aa20.49■□□□□ 0.87
AFF1-205ENST00000504956 INTS5Q6P9B9 1019 aaKnown RBP20.49■□□□□ 0.87
AFF1-205ENST00000504956 TWISTNBQ3B726 338 aaPredicted RBP20.48■□□□□ 0.87
AFF1-205ENST00000504956 AMIGO3Q86WK7 504 aa20.48■□□□□ 0.87
AFF1-205ENST00000504956 TRMT2AQ8IZ69 625 aaKnown RBP20.48■□□□□ 0.87
AFF1-205ENST00000504956 TFCP2L1Q9NZI6 479 aa20.48■□□□□ 0.87
AFF1-205ENST00000504956 CACNA1FO60840 1977 aa20.48■□□□□ 0.87
AFF1-205ENST00000504956 HOXB7P09629 217 aa20.48■□□□□ 0.87
AFF1-205ENST00000504956 HMGB2P26583 209 aaKnown RBP20.48■□□□□ 0.87
AFF1-205ENST00000504956 CANXP27824 592 aaKnown RBP20.48■□□□□ 0.87
AFF1-205ENST00000504956 RC3H1Q5TC82 1133 aaKnown RBP20.48■□□□□ 0.87
AFF1-205ENST00000504956 PHF14O94880 888 aa20.47■□□□□ 0.87
AFF1-205ENST00000504956 HDGFL1Q5TGJ6 251 aa20.47■□□□□ 0.87
AFF1-205ENST00000504956 CASZ1Q86V15 1759 aa20.47■□□□□ 0.87
AFF1-205ENST00000504956 ZNF330Q9Y3S2 320 aaPredicted RBP20.46■□□□□ 0.87
AFF1-205ENST00000504956 PSDA5PKW4 1024 aaPredicted RBP20.45■□□□□ 0.86
AFF1-205ENST00000504956 R3HDM1Q15032 1099 aaKnown RBP20.45■□□□□ 0.86
AFF1-205ENST00000504956 RTCBQ9Y3I0 505 aaKnown RBP20.45■□□□□ 0.86
AFF1-205ENST00000504956 PNPLA7Q6ZV29 1317 aa20.45■□□□□ 0.86
AFF1-205ENST00000504956 NBPF26B4DH59 902 aa20.45■□□□□ 0.86
AFF1-205ENST00000504956 RPS6KA4O75676 772 aa20.45■□□□□ 0.86
AFF1-205ENST00000504956 NBPF10Q6P3W6 841 aaKnown RBP20.45■□□□□ 0.86
AFF1-205ENST00000504956 NBPF15Q8N660 670 aa20.45■□□□□ 0.86
AFF1-205ENST00000504956 SOS1Q07889 1333 aaPredicted RBP20.44■□□□□ 0.86
AFF1-205ENST00000504956 ANXA1P04083 346 aa20.44■□□□□ 0.86
AFF1-205ENST00000504956 MYL6BP14649 208 aa20.44■□□□□ 0.86
AFF1-205ENST00000504956 COL15A1P39059 1388 aa20.43■□□□□ 0.86
AFF1-205ENST00000504956 BCORQ6W2J9 1755 aa20.43■□□□□ 0.86
AFF1-205ENST00000504956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.43■□□□□ 0.86
AFF1-205ENST00000504956 VAMP4O75379 141 aa20.43■□□□□ 0.86
AFF1-205ENST00000504956 CHPF2Q9P2E5 772 aa20.43■□□□□ 0.86
AFF1-205ENST00000504956 TCERG1O14776 1098 aaKnown RBP20.42■□□□□ 0.86
AFF1-205ENST00000504956 SSFA2P28290 1259 aa20.42■□□□□ 0.86
AFF1-205ENST00000504956 PROSER3Q2NL68 480 aa20.42■□□□□ 0.86
AFF1-205ENST00000504956 SCN7AQ01118 1682 aa20.42■□□□□ 0.86
AFF1-205ENST00000504956 PDIA6Q15084 440 aa20.42■□□□□ 0.86
AFF1-205ENST00000504956 PDGFDQ9GZP0 370 aaPredicted RBP20.42■□□□□ 0.86
AFF1-205ENST00000504956 ERBB4Q15303 1308 aa20.41■□□□□ 0.86
AFF1-205ENST00000504956 IL6STP40189 918 aaPredicted RBP20.41■□□□□ 0.86
AFF1-205ENST00000504956 MSH5O43196 834 aa20.4■□□□□ 0.86
AFF1-205ENST00000504956 EIF5P55010 431 aaKnown RBP20.4■□□□□ 0.86
AFF1-205ENST00000504956 CCDC30Q5VVM6 783 aa20.4■□□□□ 0.86
AFF1-205ENST00000504956 COL23A1Q86Y22 540 aaPredicted RBP20.4■□□□□ 0.86
AFF1-205ENST00000504956 NUP98P52948 1817 aa20.39■□□□□ 0.86
AFF1-205ENST00000504956 TRAPPC3LQ5T215 181 aa20.39■□□□□ 0.86
AFF1-205ENST00000504956 ARHGEF1Q92888 912 aaKnown RBP20.39■□□□□ 0.86
AFF1-205ENST00000504956 DDX21Q9NR30 783 aaKnown RBP eCLIP20.38■□□□□ 0.85
AFF1-205ENST00000504956 DBF4Q9UBU7 674 aaPredicted RBP20.38■□□□□ 0.85
AFF1-205ENST00000504956 ADRA2BP18089 450 aa20.38■□□□□ 0.85
AFF1-205ENST00000504956 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
AFF1-205ENST00000504956 FLAD1Q8NFF5 587 aa20.38■□□□□ 0.85
AFF1-205ENST00000504956 ARXQ96QS3 562 aa20.38■□□□□ 0.85
AFF1-205ENST00000504956 ARFGEF2Q9Y6D5 1785 aa20.37■□□□□ 0.85
AFF1-205ENST00000504956 LRP10Q7Z4F1 713 aa20.37■□□□□ 0.85
AFF1-205ENST00000504956 STK31Q9BXU1 1019 aa20.37■□□□□ 0.85
AFF1-205ENST00000504956 RFC4P35249 363 aa20.36■□□□□ 0.85
AFF1-205ENST00000504956 SRP68Q9UHB9 627 aaKnown RBP20.36■□□□□ 0.85
AFF1-205ENST00000504956 TBC1D2BQ9UPU7 963 aa20.36■□□□□ 0.85
AFF1-205ENST00000504956 CHMP4AQ9BY43 222 aa20.35■□□□□ 0.85
AFF1-205ENST00000504956 AIMP1Q12904 312 aaKnown RBP20.35■□□□□ 0.85
AFF1-205ENST00000504956 TTLL7Q6ZT98 887 aa20.35■□□□□ 0.85
AFF1-205ENST00000504956 DZIP3Q86Y13 1208 aaKnown RBP20.35■□□□□ 0.85
AFF1-205ENST00000504956 PHAXQ9H814 394 aaKnown RBP20.35■□□□□ 0.85
AFF1-205ENST00000504956 ANKRD36CQ5JPF3 1778 aa20.35■□□□□ 0.85
AFF1-205ENST00000504956 A0A087WZG4 1122 aa20.34■□□□□ 0.85
AFF1-205ENST00000504956 XAGE3Q8WTP9 111 aa20.34■□□□□ 0.85
AFF1-205ENST00000504956 BCL2L13Q9BXK5 485 aa20.34■□□□□ 0.85
AFF1-205ENST00000504956 HYPKQ9NX55 129 aa20.34■□□□□ 0.85
AFF1-205ENST00000504956 USP42Q9H9J4 1324 aaKnown RBP20.33■□□□□ 0.85
AFF1-205ENST00000504956 SLC4A2P04920 1241 aa20.33■□□□□ 0.85
AFF1-205ENST00000504956 CT47B1P0C2W7 299 aaPredicted RBP20.33■□□□□ 0.85
AFF1-205ENST00000504956 COL24A1Q17RW2 1714 aa20.33■□□□□ 0.84
AFF1-205ENST00000504956 ZPR1O75312 459 aa20.32■□□□□ 0.84
AFF1-205ENST00000504956 USPL1Q5W0Q7 1092 aa20.32■□□□□ 0.84
AFF1-205ENST00000504956 COPS6Q7L5N1 327 aa20.32■□□□□ 0.84
AFF1-205ENST00000504956 G2E3Q7L622 706 aa20.32■□□□□ 0.84
AFF1-205ENST00000504956 SSH1Q8WYL5 1049 aa20.32■□□□□ 0.84
AFF1-205ENST00000504956 NARFQ9UHQ1 456 aa20.32■□□□□ 0.84
AFF1-205ENST00000504956 ZBTB7AO95365 584 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms