RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 SALL3Q9BXA9 1300 aa13.76□□□□□ -0.21
PAPD4-207ENST00000504233 UPF3BQ9BZI7 483 aaKnown RBP13.76□□□□□ -0.21
PAPD4-207ENST00000504233 PI4KAP2A4QPH2 592 aa13.76□□□□□ -0.21
PAPD4-207ENST00000504233 CHMLP26374 656 aa13.76□□□□□ -0.21
PAPD4-207ENST00000504233 SKOR2Q2VWA4 1001 aaPredicted RBP13.76□□□□□ -0.21
PAPD4-207ENST00000504233 ZNF530Q6P9A1 599 aaPredicted RBP13.76□□□□□ -0.21
PAPD4-207ENST00000504233 PI4KAP1Q8N8J0 262 aa13.76□□□□□ -0.21
PAPD4-207ENST00000504233 FAM208AQ9UK61 1670 aaKnown RBP13.75□□□□□ -0.21
PAPD4-207ENST00000504233 SRGAP3O43295 1099 aa13.75□□□□□ -0.21
PAPD4-207ENST00000504233 IP6K1Q92551 441 aa13.75□□□□□ -0.21
PAPD4-207ENST00000504233 SRCIN1Q9C0H9 1055 aa13.75□□□□□ -0.21
PAPD4-207ENST00000504233 ANKARQ7Z5J8 1434 aa13.75□□□□□ -0.21
PAPD4-207ENST00000504233 CAVIN1Q6NZI2 390 aaKnown RBP13.75□□□□□ -0.21
PAPD4-207ENST00000504233 XRN1Q8IZH2 1706 aaKnown RBP13.74□□□□□ -0.21
PAPD4-207ENST00000504233 MARF1Q9Y4F3 1742 aaKnown RBP13.74□□□□□ -0.21
PAPD4-207ENST00000504233 EIF4A1P60842 406 aaKnown RBP13.74□□□□□ -0.21
PAPD4-207ENST00000504233 NUCB2P80303 420 aa13.74□□□□□ -0.21
PAPD4-207ENST00000504233 TEFQ10587 303 aa13.74□□□□□ -0.21
PAPD4-207ENST00000504233 PRPF40AO75400 957 aaKnown RBP13.74□□□□□ -0.21
PAPD4-207ENST00000504233 TMX3Q96JJ7 454 aa13.74□□□□□ -0.21
PAPD4-207ENST00000504233 ORAI2Q96SN7 254 aa13.74□□□□□ -0.21
PAPD4-207ENST00000504233 ZDHHC9Q9Y397 364 aa13.74□□□□□ -0.21
PAPD4-207ENST00000504233 MSNP26038 577 aaKnown RBP13.74□□□□□ -0.21
PAPD4-207ENST00000504233 PRAMEF22A3QJZ6 481 aa13.73□□□□□ -0.21
PAPD4-207ENST00000504233 BTBD11A6QL63 1104 aa13.73□□□□□ -0.21
PAPD4-207ENST00000504233 LRRC37A3O60309 1634 aa13.73□□□□□ -0.21
PAPD4-207ENST00000504233 SOS1Q07889 1333 aaPredicted RBP13.73□□□□□ -0.21
PAPD4-207ENST00000504233 RBM27Q9P2N5 1060 aaKnown RBP13.73□□□□□ -0.21
PAPD4-207ENST00000504233 VGLL3A8MV65 326 aa13.72□□□□□ -0.21
PAPD4-207ENST00000504233 CYP2E1P05181 493 aaPredicted RBP13.72□□□□□ -0.21
PAPD4-207ENST00000504233 RNF214Q8ND24 703 aa13.72□□□□□ -0.21
PAPD4-207ENST00000504233 ANKLE2Q86XL3 938 aa13.72□□□□□ -0.21
PAPD4-207ENST00000504233 DNAAF4Q8WXU2 420 aa13.72□□□□□ -0.21
PAPD4-207ENST00000504233 LARP6Q9BRS8 491 aaKnown RBP13.72□□□□□ -0.21
PAPD4-207ENST00000504233 DTNBO60941 627 aa13.71□□□□□ -0.21
PAPD4-207ENST00000504233 OS9Q13438 667 aaPredicted RBP13.71□□□□□ -0.21
PAPD4-207ENST00000504233 PROSER3Q2NL68 480 aa13.71□□□□□ -0.21
PAPD4-207ENST00000504233 KLHL40Q2TBA0 621 aa13.71□□□□□ -0.21
PAPD4-207ENST00000504233 RHPN1Q8TCX5 695 aa13.71□□□□□ -0.21
PAPD4-207ENST00000504233 SSH3Q8TE77 659 aa13.71□□□□□ -0.21
PAPD4-207ENST00000504233 LMBRD1Q9NUN5 540 aa13.71□□□□□ -0.21
PAPD4-207ENST00000504233 LTN1O94822 1766 aa13.71□□□□□ -0.21
PAPD4-207ENST00000504233 MCCP23508 829 aa13.71□□□□□ -0.21
PAPD4-207ENST00000504233 PDCL3Q9H2J4 239 aa13.71□□□□□ -0.22
PAPD4-207ENST00000504233 PRDM4Q9UKN5 801 aa13.71□□□□□ -0.22
PAPD4-207ENST00000504233 PTMSP20962 102 aa13.7□□□□□ -0.22
PAPD4-207ENST00000504233 BEND3Q5T5X7 828 aa13.7□□□□□ -0.22
PAPD4-207ENST00000504233 CWC22Q9HCG8 908 aaKnown RBP13.7□□□□□ -0.22
PAPD4-207ENST00000504233 STAP2Q9UGK3 403 aa13.7□□□□□ -0.22
PAPD4-207ENST00000504233 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
PAPD4-207ENST00000504233 UQCRHLA0A096LP55 91 aa13.7□□□□□ -0.22
PAPD4-207ENST00000504233 UQCRHP07919 91 aa13.7□□□□□ -0.22
PAPD4-207ENST00000504233 CLEC17AQ6ZS10 378 aa13.7□□□□□ -0.22
PAPD4-207ENST00000504233 RGPD2P0DJD1 1756 aa13.7□□□□□ -0.22
PAPD4-207ENST00000504233 CBX1P83916 185 aa13.69□□□□□ -0.22
PAPD4-207ENST00000504233 DNTTIP2Q5QJE6 756 aaKnown RBP13.69□□□□□ -0.22
PAPD4-207ENST00000504233 HOMEZQ8IX15 550 aa13.69□□□□□ -0.22
PAPD4-207ENST00000504233 PA2G4Q9UQ80 394 aaKnown RBP13.69□□□□□ -0.22
PAPD4-207ENST00000504233 GCP02774 474 aa13.69□□□□□ -0.22
PAPD4-207ENST00000504233 AIMP1Q12904 312 aaKnown RBP13.69□□□□□ -0.22
PAPD4-207ENST00000504233 CWF19L2Q2TBE0 894 aaKnown RBP13.69□□□□□ -0.22
PAPD4-207ENST00000504233 NSFL1CQ9UNZ2 370 aaKnown RBP13.69□□□□□ -0.22
PAPD4-207ENST00000504233 NASPP49321 788 aaPredicted RBP13.68□□□□□ -0.22
PAPD4-207ENST00000504233 C1orf141Q5JVX7 400 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 GPT2Q8TD30 523 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 ZSCAN23Q3MJ62 389 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 PLEKHO1Q53GL0 409 aaPredicted RBP13.68□□□□□ -0.22
PAPD4-207ENST00000504233 CWC27Q6UX04 472 aaKnown RBP13.68□□□□□ -0.22
PAPD4-207ENST00000504233 BABAM1Q9NWV8 329 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 MAP3K2Q9Y2U5 619 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 PXDNQ92626 1479 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 ZBTB22O15209 634 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 POLA2Q14181 598 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 PI4K2BQ8TCG2 481 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 SPG7Q9UQ90 795 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 AXIN2Q9Y2T1 843 aa13.68□□□□□ -0.22
PAPD4-207ENST00000504233 AKAP4Q5JQC9 854 aa13.67□□□□□ -0.22
PAPD4-207ENST00000504233 ANKRD24Q8TF21 1146 aa13.67□□□□□ -0.22
PAPD4-207ENST00000504233 C9orf78Q9NZ63 289 aaPredicted RBP13.67□□□□□ -0.22
PAPD4-207ENST00000504233 ISY1Q9ULR0 285 aaKnown RBP13.67□□□□□ -0.22
PAPD4-207ENST00000504233 ADCY9O60503 1353 aa13.67□□□□□ -0.22
PAPD4-207ENST00000504233 RNMTO43148 476 aaKnown RBP13.67□□□□□ -0.22
PAPD4-207ENST00000504233 ZC3H6P61129 1189 aaKnown RBP13.67□□□□□ -0.22
PAPD4-207ENST00000504233 KCNH5Q8NCM2 988 aa13.67□□□□□ -0.22
PAPD4-207ENST00000504233 KIF1BPQ96EK5 621 aa13.67□□□□□ -0.22
PAPD4-207ENST00000504233 GDPD2Q9HCC8 539 aa13.67□□□□□ -0.22
PAPD4-207ENST00000504233 CPA1P15085 419 aa13.66□□□□□ -0.22
PAPD4-207ENST00000504233 NFAT5O94916 1531 aa13.66□□□□□ -0.22
PAPD4-207ENST00000504233 CACNA1FO60840 1977 aa13.66□□□□□ -0.22
PAPD4-207ENST00000504233 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
PAPD4-207ENST00000504233 RAB11FIP3O75154 756 aa13.66□□□□□ -0.22
PAPD4-207ENST00000504233 DDX54Q8TDD1 881 aaKnown RBP13.66□□□□□ -0.22
PAPD4-207ENST00000504233 SLC39A6Q13433 755 aa13.65□□□□□ -0.22
PAPD4-207ENST00000504233 C17orf53Q8N3J3 647 aaPredicted RBP13.65□□□□□ -0.22
PAPD4-207ENST00000504233 ANP32BQ92688 251 aaKnown RBP13.65□□□□□ -0.22
PAPD4-207ENST00000504233 BBXQ8WY36 941 aaPredicted RBP13.65□□□□□ -0.22
PAPD4-207ENST00000504233 ZNF830Q96NB3 372 aaPredicted RBP13.65□□□□□ -0.22
PAPD4-207ENST00000504233 PXDNLA1KZ92 1463 aa13.65□□□□□ -0.22
PAPD4-207ENST00000504233 PRIM1P49642 420 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms