RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 ZBTB1Q9Y2K1 713 aa13.6□□□□□ -0.23
COPS4-202ENST00000503682 FCHSD2O94868 740 aa13.59□□□□□ -0.23
COPS4-202ENST00000503682 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
COPS4-202ENST00000503682 FKBP8Q14318 412 aa13.59□□□□□ -0.23
COPS4-202ENST00000503682 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
COPS4-202ENST00000503682 CCDC87Q9NVE4 849 aa13.59□□□□□ -0.23
COPS4-202ENST00000503682 CD2APQ9Y5K6 639 aa13.59□□□□□ -0.23
COPS4-202ENST00000503682 CANXP27824 592 aaKnown RBP13.59□□□□□ -0.23
COPS4-202ENST00000503682 ZNF790Q6PG37 636 aa13.59□□□□□ -0.23
COPS4-202ENST00000503682 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.23
COPS4-202ENST00000503682 KIAA1551Q9HCM1 1747 aa13.58□□□□□ -0.24
COPS4-202ENST00000503682 KIF13BQ9NQT8 1826 aa13.58□□□□□ -0.24
COPS4-202ENST00000503682 PRAMEF22A3QJZ6 481 aa13.57□□□□□ -0.24
COPS4-202ENST00000503682 BTBD11A6QL63 1104 aa13.57□□□□□ -0.24
COPS4-202ENST00000503682 SOS1Q07889 1333 aaPredicted RBP13.57□□□□□ -0.24
COPS4-202ENST00000503682 USPL1Q5W0Q7 1092 aa13.57□□□□□ -0.24
COPS4-202ENST00000503682 NLGN1Q8N2Q7 840 aa13.57□□□□□ -0.24
COPS4-202ENST00000503682 USP42Q9H9J4 1324 aaKnown RBP13.57□□□□□ -0.24
COPS4-202ENST00000503682 HEG1Q9ULI3 1381 aa13.56□□□□□ -0.24
COPS4-202ENST00000503682 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
COPS4-202ENST00000503682 MIS18AQ9NYP9 233 aa13.56□□□□□ -0.24
COPS4-202ENST00000503682 PIP4K2AP48426 406 aaPredicted RBP13.56□□□□□ -0.24
COPS4-202ENST00000503682 DDR1Q08345 913 aa13.56□□□□□ -0.24
COPS4-202ENST00000503682 VSIG10Q8N0Z9 540 aa13.56□□□□□ -0.24
COPS4-202ENST00000503682 PLEKHF1Q96S99 279 aa13.56□□□□□ -0.24
COPS4-202ENST00000503682 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
COPS4-202ENST00000503682 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
COPS4-202ENST00000503682 COL15A1P39059 1388 aa13.55□□□□□ -0.24
COPS4-202ENST00000503682 A1BGP04217 495 aa13.55□□□□□ -0.24
COPS4-202ENST00000503682 THUMPD2Q9BTF0 503 aaKnown RBP13.55□□□□□ -0.24
COPS4-202ENST00000503682 PARP3Q9Y6F1 533 aa13.55□□□□□ -0.24
COPS4-202ENST00000503682 A0A0G2JLW4 131 aa13.54□□□□□ -0.24
COPS4-202ENST00000503682 RALBP1Q15311 655 aa13.54□□□□□ -0.24
COPS4-202ENST00000503682 FMNL2Q96PY5 1086 aa13.54□□□□□ -0.24
COPS4-202ENST00000503682 ZPR1O75312 459 aa13.53□□□□□ -0.24
COPS4-202ENST00000503682 ZNF784Q8NCA9 323 aaPredicted RBP13.53□□□□□ -0.24
COPS4-202ENST00000503682 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
COPS4-202ENST00000503682 USP16Q9Y5T5 823 aa13.53□□□□□ -0.24
COPS4-202ENST00000503682 PXDNLA1KZ92 1463 aa13.53□□□□□ -0.24
COPS4-202ENST00000503682 STARD3NLO95772 234 aa13.53□□□□□ -0.24
COPS4-202ENST00000503682 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
COPS4-202ENST00000503682 C10orf71Q711Q0 1435 aa13.52□□□□□ -0.24
COPS4-202ENST00000503682 DPEP1P16444 411 aa13.52□□□□□ -0.25
COPS4-202ENST00000503682 TM4SF1P30408 202 aa13.52□□□□□ -0.25
COPS4-202ENST00000503682 EIF5P55010 431 aaKnown RBP13.52□□□□□ -0.25
COPS4-202ENST00000503682 NARFQ9UHQ1 456 aa13.52□□□□□ -0.25
COPS4-202ENST00000503682 TBC1D2BQ9UPU7 963 aa13.52□□□□□ -0.25
COPS4-202ENST00000503682 MYBBP1AQ9BQG0 1328 aaKnown RBP13.51□□□□□ -0.25
COPS4-202ENST00000503682 KDM3BQ7LBC6 1761 aa13.51□□□□□ -0.25
COPS4-202ENST00000503682 POLRMTO00411 1230 aaKnown RBP13.51□□□□□ -0.25
COPS4-202ENST00000503682 NEFMP07197 916 aa13.51□□□□□ -0.25
COPS4-202ENST00000503682 NFE2L2Q16236 605 aa13.51□□□□□ -0.25
COPS4-202ENST00000503682 BICDL1Q6ZP65 573 aa13.51□□□□□ -0.25
COPS4-202ENST00000503682 CCDC146Q8IYE0 955 aa13.51□□□□□ -0.25
COPS4-202ENST00000503682 GRIN3BO60391 1043 aa13.5□□□□□ -0.25
COPS4-202ENST00000503682 NFIXQ14938 502 aa13.5□□□□□ -0.25
COPS4-202ENST00000503682 MAPK8IP3Q9UPT6 1336 aa13.5□□□□□ -0.25
COPS4-202ENST00000503682 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
COPS4-202ENST00000503682 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
COPS4-202ENST00000503682 BCS1LQ9Y276 419 aa13.5□□□□□ -0.25
COPS4-202ENST00000503682 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
COPS4-202ENST00000503682 CHRNA5P30532 468 aa13.49□□□□□ -0.25
COPS4-202ENST00000503682 CCDC24Q8N4L8 307 aa13.49□□□□□ -0.25
COPS4-202ENST00000503682 TEX13AQ9BXU3 409 aaPredicted RBP13.49□□□□□ -0.25
COPS4-202ENST00000503682 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
COPS4-202ENST00000503682 SCN7AQ01118 1682 aa13.49□□□□□ -0.25
COPS4-202ENST00000503682 KCNA3P22001 575 aa13.48□□□□□ -0.25
COPS4-202ENST00000503682 TGFB2P61812 414 aa13.48□□□□□ -0.25
COPS4-202ENST00000503682 NEUROD2Q15784 382 aa13.48□□□□□ -0.25
COPS4-202ENST00000503682 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
COPS4-202ENST00000503682 PRKRIP1Q9H875 184 aaPredicted RBP13.48□□□□□ -0.25
COPS4-202ENST00000503682 ZNF219Q9P2Y4 722 aaPredicted RBP13.48□□□□□ -0.25
COPS4-202ENST00000503682 NRXN2Q9P2S2 1712 aa13.48□□□□□ -0.25
COPS4-202ENST00000503682 SNRPA1P09661 255 aaKnown RBP13.47□□□□□ -0.25
COPS4-202ENST00000503682 RIPK4P57078 832 aa13.47□□□□□ -0.25
COPS4-202ENST00000503682 LAMB4A4D0S4 1761 aa13.47□□□□□ -0.25
COPS4-202ENST00000503682 BCORQ6W2J9 1755 aa13.47□□□□□ -0.25
COPS4-202ENST00000503682 CARMIL3Q8ND23 1372 aa13.47□□□□□ -0.25
COPS4-202ENST00000503682 SERPINB2P05120 415 aa13.47□□□□□ -0.25
COPS4-202ENST00000503682 IL6STP40189 918 aaPredicted RBP13.47□□□□□ -0.25
COPS4-202ENST00000503682 ANKRD31Q8N7Z5 1873 aa13.46□□□□□ -0.25
COPS4-202ENST00000503682 NBPF26B4DH59 902 aa13.46□□□□□ -0.25
COPS4-202ENST00000503682 NBPF10Q6P3W6 841 aaKnown RBP13.46□□□□□ -0.25
COPS4-202ENST00000503682 NBPF15Q8N660 670 aa13.46□□□□□ -0.25
COPS4-202ENST00000503682 ARFGEF1Q9Y6D6 1849 aa13.46□□□□□ -0.26
COPS4-202ENST00000503682 A0A087WZG4 1122 aa13.45□□□□□ -0.26
COPS4-202ENST00000503682 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
COPS4-202ENST00000503682 PNNQ9H307 717 aaKnown RBP13.45□□□□□ -0.26
COPS4-202ENST00000503682 ADAMTS8Q9UP79 889 aa13.45□□□□□ -0.26
COPS4-202ENST00000503682 CAMTA2O94983 1202 aa13.44□□□□□ -0.26
COPS4-202ENST00000503682 CACNA1SQ13698 1873 aa13.44□□□□□ -0.26
COPS4-202ENST00000503682 DZIP3Q86Y13 1208 aaKnown RBP13.44□□□□□ -0.26
COPS4-202ENST00000503682 NGEFQ8N5V2 710 aa13.44□□□□□ -0.26
COPS4-202ENST00000503682 ZNF526Q8TF50 670 aaPredicted RBP13.44□□□□□ -0.26
COPS4-202ENST00000503682 EIF4A1P60842 406 aaKnown RBP13.44□□□□□ -0.26
COPS4-202ENST00000503682 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
COPS4-202ENST00000503682 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
COPS4-202ENST00000503682 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
COPS4-202ENST00000503682 SENP3-EIF4A1A0A087X0R7 540 aa13.43□□□□□ -0.26
COPS4-202ENST00000503682 GIGYF1O75420 1035 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms