RNA–Protein interactions for RNA: ENST00000503620.1

PAPD4-206, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 3

Gene PAPD4, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-206ENST00000503620 CAPNS2Q96L46 248 aa11.85□□□□□ -0.51
PAPD4-206ENST00000503620 SLC12A5Q9H2X9 1139 aa11.85□□□□□ -0.51
PAPD4-206ENST00000503620 LTBP3Q9NS15 1303 aa11.85□□□□□ -0.51
PAPD4-206ENST00000503620 CARMIL3Q8ND23 1372 aa11.84□□□□□ -0.51
PAPD4-206ENST00000503620 SCN4AP35499 1836 aa11.83□□□□□ -0.51
PAPD4-206ENST00000503620 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
PAPD4-206ENST00000503620 AMPHP49418 695 aa11.83□□□□□ -0.52
PAPD4-206ENST00000503620 FMR1Q06787 632 aaKnown RBP eCLIP11.83□□□□□ -0.52
PAPD4-206ENST00000503620 DGKZQ13574 1117 aa11.83□□□□□ -0.52
PAPD4-206ENST00000503620 GPR101Q96P66 508 aaPredicted RBP11.83□□□□□ -0.52
PAPD4-206ENST00000503620 TMOD3Q9NYL9 352 aa11.83□□□□□ -0.52
PAPD4-206ENST00000503620 AFDNP55196 1824 aaKnown RBP11.82□□□□□ -0.52
PAPD4-206ENST00000503620 RRS1Q15050 365 aaKnown RBP11.82□□□□□ -0.52
PAPD4-206ENST00000503620 HABP4Q5JVS0 413 aaKnown RBP11.82□□□□□ -0.52
PAPD4-206ENST00000503620 MAP1SQ66K74 1059 aaPredicted RBP11.82□□□□□ -0.52
PAPD4-206ENST00000503620 CYP4F22Q6NT55 531 aa11.82□□□□□ -0.52
PAPD4-206ENST00000503620 CNTROBQ8N137 903 aa11.82□□□□□ -0.52
PAPD4-206ENST00000503620 IQCA1LA6NCM1 817 aa11.81□□□□□ -0.52
PAPD4-206ENST00000503620 AOC2O75106 756 aa11.81□□□□□ -0.52
PAPD4-206ENST00000503620 HSP90AB2PQ58FF8 381 aa11.81□□□□□ -0.52
PAPD4-206ENST00000503620 CST9Q5W186 159 aa11.81□□□□□ -0.52
PAPD4-206ENST00000503620 DDX21Q9NR30 783 aaKnown RBP eCLIP11.81□□□□□ -0.52
PAPD4-206ENST00000503620 INSRP06213 1382 aa11.8□□□□□ -0.52
PAPD4-206ENST00000503620 RANBP2P49792 3224 aaKnown RBP11.8□□□□□ -0.52
PAPD4-206ENST00000503620 NFIXQ14938 502 aa11.8□□□□□ -0.52
PAPD4-206ENST00000503620 MAP2K2P36507 400 aa11.79□□□□□ -0.52
PAPD4-206ENST00000503620 CRKLP46109 303 aaKnown RBP11.79□□□□□ -0.52
PAPD4-206ENST00000503620 FXR1P51114 621 aaKnown RBP eCLIP11.79□□□□□ -0.52
PAPD4-206ENST00000503620 BCL2L12Q9HB09 334 aa11.79□□□□□ -0.52
PAPD4-206ENST00000503620 ABT1Q9ULW3 272 aaKnown RBP11.79□□□□□ -0.52
PAPD4-206ENST00000503620 ZNF541Q9H0D2 1346 aa11.79□□□□□ -0.52
PAPD4-206ENST00000503620 TONSLQ96HA7 1378 aa11.79□□□□□ -0.52
PAPD4-206ENST00000503620 CA12O43570 354 aa11.78□□□□□ -0.52
PAPD4-206ENST00000503620 C21orf2O43822 256 aa11.78□□□□□ -0.52
PAPD4-206ENST00000503620 PHKG2P15735 406 aa11.78□□□□□ -0.52
PAPD4-206ENST00000503620 INTS5Q6P9B9 1019 aaKnown RBP11.78□□□□□ -0.52
PAPD4-206ENST00000503620 C2CD5Q86YS7 1000 aa11.78□□□□□ -0.52
PAPD4-206ENST00000503620 COL6A3P12111 3177 aa11.77□□□□□ -0.52
PAPD4-206ENST00000503620 TRIOBPQ9H2D6 2365 aa11.77□□□□□ -0.52
PAPD4-206ENST00000503620 EPHX2P34913 555 aa11.77□□□□□ -0.53
PAPD4-206ENST00000503620 EAPPQ56P03 285 aaPredicted RBP11.77□□□□□ -0.53
PAPD4-206ENST00000503620 HDGFL2Q7Z4V5 671 aaPredicted RBP11.77□□□□□ -0.53
PAPD4-206ENST00000503620 BEGAINQ9BUH8 593 aa11.77□□□□□ -0.53
PAPD4-206ENST00000503620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.533e-8■□□□□ 10.8
PAPD4-206ENST00000503620 TLL2Q9Y6L7 1015 aa11.77□□□□□ -0.53
PAPD4-206ENST00000503620 COL11A2P13942 1736 aaPredicted RBP11.77□□□□□ -0.53
PAPD4-206ENST00000503620 ANKRD31Q8N7Z5 1873 aa11.76□□□□□ -0.53
PAPD4-206ENST00000503620 HTTP42858 3142 aa11.76□□□□□ -0.53
PAPD4-206ENST00000503620 ECE1P42892 770 aa11.76□□□□□ -0.53
PAPD4-206ENST00000503620 USPL1Q5W0Q7 1092 aa11.76□□□□□ -0.53
PAPD4-206ENST00000503620 COG3Q96JB2 828 aa11.76□□□□□ -0.53
PAPD4-206ENST00000503620 ZIC5Q96T25 663 aa11.76□□□□□ -0.53
PAPD4-206ENST00000503620 RBM42Q9BTD8 480 aaKnown RBP11.76□□□□□ -0.53
PAPD4-206ENST00000503620 TAOK3Q9H2K8 898 aa11.76□□□□□ -0.53
PAPD4-206ENST00000503620 TJP1Q07157 1748 aa11.76□□□□□ -0.53
PAPD4-206ENST00000503620 CEP290O15078 2479 aa11.75□□□□□ -0.53
PAPD4-206ENST00000503620 BRPF1P55201 1214 aaPredicted RBP11.75□□□□□ -0.53
PAPD4-206ENST00000503620 C7orf43Q8WVR3 580 aa11.75□□□□□ -0.53
PAPD4-206ENST00000503620 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
PAPD4-206ENST00000503620 HACL1Q9UJ83 578 aa11.75□□□□□ -0.53
PAPD4-206ENST00000503620 BRCA2P51587 3418 aa11.75□□□□□ -0.53
PAPD4-206ENST00000503620 SERPINB2P05120 415 aa11.74□□□□□ -0.53
PAPD4-206ENST00000503620 TMC1Q8TDI8 760 aa11.74□□□□□ -0.53
PAPD4-206ENST00000503620 GCC1Q96CN9 775 aa11.74□□□□□ -0.53
PAPD4-206ENST00000503620 H0YIN7 160 aa11.73□□□□□ -0.53
PAPD4-206ENST00000503620 TRAF5O00463 557 aa11.73□□□□□ -0.53
PAPD4-206ENST00000503620 FLT4P35916 1363 aa11.73□□□□□ -0.53
PAPD4-206ENST00000503620 SOS1Q07889 1333 aaPredicted RBP11.73□□□□□ -0.53
PAPD4-206ENST00000503620 RNF123Q5XPI4 1314 aa11.73□□□□□ -0.53
PAPD4-206ENST00000503620 SAPCD2Q86UD0 394 aa11.73□□□□□ -0.53
PAPD4-206ENST00000503620 PNMA8AQ86V59 439 aaPredicted RBP11.73□□□□□ -0.53
PAPD4-206ENST00000503620 SLX4Q8IY92 1834 aa11.73□□□□□ -0.53
PAPD4-206ENST00000503620 TERF2IPQ9NYB0 399 aa11.73□□□□□ -0.53
PAPD4-206ENST00000503620 SPG7Q9UQ90 795 aa11.73□□□□□ -0.53
PAPD4-206ENST00000503620 KIF24Q5T7B8 1368 aa11.72□□□□□ -0.53
PAPD4-206ENST00000503620 ERVV-2B6SEH9 535 aa11.72□□□□□ -0.53
PAPD4-206ENST00000503620 GRM1Q13255 1194 aa11.72□□□□□ -0.53
PAPD4-206ENST00000503620 IFNL2Q8IZJ0 200 aa11.72□□□□□ -0.53
PAPD4-206ENST00000503620 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
PAPD4-206ENST00000503620 DLL1O00548 723 aa11.71□□□□□ -0.53
PAPD4-206ENST00000503620 FYB1O15117 783 aa11.71□□□□□ -0.53
PAPD4-206ENST00000503620 CIAPIN1Q6FI81 312 aa11.71□□□□□ -0.53
PAPD4-206ENST00000503620 NARFQ9UHQ1 456 aa11.71□□□□□ -0.53
PAPD4-206ENST00000503620 FZD9O00144 591 aa11.7□□□□□ -0.54
PAPD4-206ENST00000503620 HHIPL1Q96JK4 782 aa11.7□□□□□ -0.54
PAPD4-206ENST00000503620 SNED1Q8TER0 1413 aa11.69□□□□□ -0.54
PAPD4-206ENST00000503620 COL4A5P29400 1685 aa11.69□□□□□ -0.54
PAPD4-206ENST00000503620 PAXIP1Q6ZW49 1069 aaPredicted RBP11.69□□□□□ -0.54
PAPD4-206ENST00000503620 PUS7Q96PZ0 661 aaKnown RBP11.69□□□□□ -0.54
PAPD4-206ENST00000503620 EYA1Q99502 592 aa11.69□□□□□ -0.54
PAPD4-206ENST00000503620 TRPM7Q96QT4 1865 aa11.68□□□□□ -0.54
PAPD4-206ENST00000503620 PTCD1O75127 700 aaKnown RBP11.68□□□□□ -0.54
PAPD4-206ENST00000503620 PRPF40BQ6NWY9 871 aaKnown RBP11.68□□□□□ -0.54
PAPD4-206ENST00000503620 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
PAPD4-206ENST00000503620 ZNF622Q969S3 477 aaKnown RBP eCLIP11.68□□□□□ -0.54
PAPD4-206ENST00000503620 BRIP1Q9BX63 1249 aa11.68□□□□□ -0.54
PAPD4-206ENST00000503620 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
PAPD4-206ENST00000503620 ZPR1O75312 459 aa11.67□□□□□ -0.54
PAPD4-206ENST00000503620 PRR5LQ6MZQ0 368 aa11.67□□□□□ -0.54
PAPD4-206ENST00000503620 NBPF15Q8N660 670 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms