RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 UTRNP46939 3433 aa11.6□□□□□ -0.55
RNF4-203ENST00000503123 ARFGEF1Q9Y6D6 1849 aa11.6□□□□□ -0.55
RNF4-203ENST00000503123 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
RNF4-203ENST00000503123 CACNA1FO60840 1977 aa11.59□□□□□ -0.55
RNF4-203ENST00000503123 RFC4P35249 363 aa11.59□□□□□ -0.55
RNF4-203ENST00000503123 LMOD3Q0VAK6 560 aa11.59□□□□□ -0.55
RNF4-203ENST00000503123 NLGN1Q8N2Q7 840 aa11.59□□□□□ -0.55
RNF4-203ENST00000503123 DLEC1Q9Y238 1755 aa11.59□□□□□ -0.55
RNF4-203ENST00000503123 USP42Q9H9J4 1324 aaKnown RBP11.59□□□□□ -0.55
RNF4-203ENST00000503123 COL15A1P39059 1388 aa11.58□□□□□ -0.56
RNF4-203ENST00000503123 DCAF8L1A6NGE4 600 aa11.58□□□□□ -0.56
RNF4-203ENST00000503123 TMPOP42166 694 aaKnown RBP11.58□□□□□ -0.56
RNF4-203ENST00000503123 DCTN1Q14203 1278 aa11.58□□□□□ -0.56
RNF4-203ENST00000503123 MSL1Q68DK7 614 aa11.58□□□□□ -0.56
RNF4-203ENST00000503123 SMIM5Q71RC9 77 aa11.58□□□□□ -0.56
RNF4-203ENST00000503123 PNISRQ8TF01 805 aaKnown RBP11.58□□□□□ -0.56
RNF4-203ENST00000503123 RUNDC1Q96C34 613 aa11.58□□□□□ -0.56
RNF4-203ENST00000503123 CD2APQ9Y5K6 639 aa11.58□□□□□ -0.56
RNF4-203ENST00000503123 GYS1P13807 737 aa11.57□□□□□ -0.56
RNF4-203ENST00000503123 BABAM1Q9NWV8 329 aa11.57□□□□□ -0.56
RNF4-203ENST00000503123 ZBTB1Q9Y2K1 713 aa11.57□□□□□ -0.56
RNF4-203ENST00000503123 SNRPA1P09661 255 aaKnown RBP11.56□□□□□ -0.56
RNF4-203ENST00000503123 RIPK4P57078 832 aa11.56□□□□□ -0.56
RNF4-203ENST00000503123 ADAMTS8Q9UP79 889 aa11.56□□□□□ -0.56
RNF4-203ENST00000503123 ANKRD31Q8N7Z5 1873 aa11.55□□□□□ -0.56
RNF4-203ENST00000503123 A0A087WZG4 1122 aa11.55□□□□□ -0.56
RNF4-203ENST00000503123 ANP32CO43423 234 aa11.55□□□□□ -0.56
RNF4-203ENST00000503123 KCNQ3O43525 872 aa11.55□□□□□ -0.56
RNF4-203ENST00000503123 ZPR1O75312 459 aa11.55□□□□□ -0.56
RNF4-203ENST00000503123 IL6STP40189 918 aaPredicted RBP11.55□□□□□ -0.56
RNF4-203ENST00000503123 EIF5P55010 431 aaKnown RBP11.55□□□□□ -0.56
RNF4-203ENST00000503123 NARFQ9UHQ1 456 aa11.55□□□□□ -0.56
RNF4-203ENST00000503123 ANKRD36CQ5JPF3 1778 aa11.54□□□□□ -0.56
RNF4-203ENST00000503123 C10orf71Q711Q0 1435 aa11.54□□□□□ -0.56
RNF4-203ENST00000503123 MMP10P09238 476 aa11.54□□□□□ -0.56
RNF4-203ENST00000503123 CANXP27824 592 aaKnown RBP11.53□□□□□ -0.56
RNF4-203ENST00000503123 CCDC146Q8IYE0 955 aa11.53□□□□□ -0.56
RNF4-203ENST00000503123 SRP68Q9UHB9 627 aaKnown RBP11.53□□□□□ -0.56
RNF4-203ENST00000503123 ARFGEF2Q9Y6D5 1785 aa11.52□□□□□ -0.57
RNF4-203ENST00000503123 RGL2O15211 777 aa11.52□□□□□ -0.57
RNF4-203ENST00000503123 EIF4A1P60842 406 aaKnown RBP11.52□□□□□ -0.57
RNF4-203ENST00000503123 FKBP8Q14318 412 aa11.52□□□□□ -0.57
RNF4-203ENST00000503123 KLHL34Q8N239 644 aa11.52□□□□□ -0.57
RNF4-203ENST00000503123 NLGN2Q8NFZ4 835 aa11.52□□□□□ -0.57
RNF4-203ENST00000503123 THUMPD2Q9BTF0 503 aaKnown RBP11.52□□□□□ -0.57
RNF4-203ENST00000503123 TRIM35Q9UPQ4 493 aa11.52□□□□□ -0.57
RNF4-203ENST00000503123 USP16Q9Y5T5 823 aa11.52□□□□□ -0.57
RNF4-203ENST00000503123 PARP3Q9Y6F1 533 aa11.52□□□□□ -0.57
RNF4-203ENST00000503123 SBF1O95248 1867 aa11.52□□□□□ -0.57
RNF4-203ENST00000503123 CACNA1SQ13698 1873 aa11.52□□□□□ -0.57
RNF4-203ENST00000503123 CCDC88AQ3V6T2 1871 aa11.51□□□□□ -0.57
RNF4-203ENST00000503123 GIGYF1O75420 1035 aaPredicted RBP11.51□□□□□ -0.57
RNF4-203ENST00000503123 A1BGP04217 495 aa11.51□□□□□ -0.57
RNF4-203ENST00000503123 TM4SF1P30408 202 aa11.51□□□□□ -0.57
RNF4-203ENST00000503123 USPL1Q5W0Q7 1092 aa11.51□□□□□ -0.57
RNF4-203ENST00000503123 NPM2Q86SE8 214 aaKnown RBP11.51□□□□□ -0.57
RNF4-203ENST00000503123 MIS18AQ9NYP9 233 aa11.51□□□□□ -0.57
RNF4-203ENST00000503123 TSPYL4Q9UJ04 414 aa11.51□□□□□ -0.57
RNF4-203ENST00000503123 PXDNLA1KZ92 1463 aa11.51□□□□□ -0.57
RNF4-203ENST00000503123 TGFB2P61812 414 aa11.5□□□□□ -0.57
RNF4-203ENST00000503123 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
RNF4-203ENST00000503123 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
RNF4-203ENST00000503123 RRP7AQ9Y3A4 280 aaKnown RBP11.5□□□□□ -0.57
RNF4-203ENST00000503123 ERBB4Q15303 1308 aa11.5□□□□□ -0.57
RNF4-203ENST00000503123 PRAMEF22A3QJZ6 481 aa11.49□□□□□ -0.57
RNF4-203ENST00000503123 POLRMTO00411 1230 aaKnown RBP11.49□□□□□ -0.57
RNF4-203ENST00000503123 CHL1O00533 1208 aa11.49□□□□□ -0.57
RNF4-203ENST00000503123 CALD1Q05682 793 aaKnown RBP11.49□□□□□ -0.57
RNF4-203ENST00000503123 DDR1Q08345 913 aa11.49□□□□□ -0.57
RNF4-203ENST00000503123 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
RNF4-203ENST00000503123 CCDC184Q52MB2 194 aa11.49□□□□□ -0.57
RNF4-203ENST00000503123 CLEC4GQ6UXB4 293 aa11.49□□□□□ -0.57
RNF4-203ENST00000503123 COL11A2P13942 1736 aaPredicted RBP11.49□□□□□ -0.57
RNF4-203ENST00000503123 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
RNF4-203ENST00000503123 APAF1O14727 1248 aa11.48□□□□□ -0.57
RNF4-203ENST00000503123 NFIXQ14938 502 aa11.48□□□□□ -0.57
RNF4-203ENST00000503123 GPR162Q16538 588 aa11.48□□□□□ -0.57
RNF4-203ENST00000503123 NBPF10Q6P3W6 841 aaKnown RBP11.48□□□□□ -0.57
RNF4-203ENST00000503123 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
RNF4-203ENST00000503123 CFAP44Q96MT7 982 aa11.48□□□□□ -0.57
RNF4-203ENST00000503123 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
RNF4-203ENST00000503123 CARMIL3Q8ND23 1372 aa11.48□□□□□ -0.57
RNF4-203ENST00000503123 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
RNF4-203ENST00000503123 GRIN3BO60391 1043 aa11.47□□□□□ -0.57
RNF4-203ENST00000503123 CAMTA2O94983 1202 aa11.47□□□□□ -0.57
RNF4-203ENST00000503123 HOXB7P09629 217 aa11.47□□□□□ -0.57
RNF4-203ENST00000503123 CCDC27Q2M243 656 aa11.47□□□□□ -0.57
RNF4-203ENST00000503123 DZIP3Q86Y13 1208 aaKnown RBP11.47□□□□□ -0.57
RNF4-203ENST00000503123 TBC1D2BQ9UPU7 963 aa11.47□□□□□ -0.57
RNF4-203ENST00000503123 ZNF652Q9Y2D9 606 aa11.47□□□□□ -0.57
RNF4-203ENST00000503123 ZNF330Q9Y3S2 320 aaPredicted RBP11.47□□□□□ -0.57
RNF4-203ENST00000503123 ZNF853P0CG23 659 aa11.46□□□□□ -0.57
RNF4-203ENST00000503123 FER1L6Q2WGJ9 1857 aa11.46□□□□□ -0.58
RNF4-203ENST00000503123 ERVV-1B6SEH8 477 aa11.45□□□□□ -0.58
RNF4-203ENST00000503123 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
RNF4-203ENST00000503123 GNAI1P63096 354 aa11.45□□□□□ -0.58
RNF4-203ENST00000503123 IFT57Q9NWB7 429 aa11.45□□□□□ -0.58
RNF4-203ENST00000503123 ATP10DQ9P241 1426 aa11.44□□□□□ -0.58
RNF4-203ENST00000503123 LAMB2P55268 1798 aa11.44□□□□□ -0.58
RNF4-203ENST00000503123 SERPINB2P05120 415 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 367.9 ms