RNA–Protein interactions for RNA: ENST00000503079.6

SMN1-203, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5 BASIC

Gene SMN1, Length 1,219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-203ENST00000503079 COL15A1P39059 1388 aa23.6■■□□□ 1.37
SMN1-203ENST00000503079 TM4SF1P30408 202 aa23.59■■□□□ 1.37
SMN1-203ENST00000503079 USPL1Q5W0Q7 1092 aa23.59■■□□□ 1.37
SMN1-203ENST00000503079 GNAT3A8MTJ3 354 aa23.58■■□□□ 1.37
SMN1-203ENST00000503079 POLRMTO00411 1230 aaKnown RBP23.58■■□□□ 1.37
SMN1-203ENST00000503079 DPEP1P16444 411 aa23.58■■□□□ 1.37
SMN1-203ENST00000503079 COL11A2P13942 1736 aaPredicted RBP23.58■■□□□ 1.37
SMN1-203ENST00000503079 KDM3BQ7LBC6 1761 aa23.57■■□□□ 1.36
SMN1-203ENST00000503079 SBF1O95248 1867 aa23.57■■□□□ 1.36
SMN1-203ENST00000503079 CARMIL3Q8ND23 1372 aa23.56■■□□□ 1.36
SMN1-203ENST00000503079 HEG1Q9ULI3 1381 aa23.56■■□□□ 1.36
SMN1-203ENST00000503079 GAS2L2Q8NHY3 880 aa23.56■■□□□ 1.36
SMN1-203ENST00000503079 PRAMEF22A3QJZ6 481 aa23.55■■□□□ 1.36
SMN1-203ENST00000503079 ZNF790Q6PG37 636 aa23.55■■□□□ 1.36
SMN1-203ENST00000503079 VSIG10Q8N0Z9 540 aa23.55■■□□□ 1.36
SMN1-203ENST00000503079 TGFB2P61812 414 aa23.53■■□□□ 1.36
SMN1-203ENST00000503079 DCTN1Q14203 1278 aa23.53■■□□□ 1.36
SMN1-203ENST00000503079 PARP3Q9Y6F1 533 aa23.53■■□□□ 1.36
SMN1-203ENST00000503079 LAMB4A4D0S4 1761 aa23.52■■□□□ 1.36
SMN1-203ENST00000503079 U2AF1L5P0DN76 240 aaPredicted RBP23.52■■□□□ 1.36
SMN1-203ENST00000503079 EIF5P55010 431 aaKnown RBP23.52■■□□□ 1.36
SMN1-203ENST00000503079 C1QTNF8P60827 252 aa23.52■■□□□ 1.36
SMN1-203ENST00000503079 U2AF1Q01081 240 aaKnown RBP eCLIP23.52■■□□□ 1.36
SMN1-203ENST00000503079 NFIXQ14938 502 aa23.52■■□□□ 1.36
SMN1-203ENST00000503079 MCM10Q7L590 875 aa23.52■■□□□ 1.36
SMN1-203ENST00000503079 NARFQ9UHQ1 456 aa23.52■■□□□ 1.36
SMN1-203ENST00000503079 CEP350Q5VT06 3117 aa23.52■■□□□ 1.36
SMN1-203ENST00000503079 CANXP27824 592 aaKnown RBP23.51■■□□□ 1.35
SMN1-203ENST00000503079 CHRNA5P30532 468 aa23.51■■□□□ 1.35
SMN1-203ENST00000503079 TEFQ10587 303 aa23.5■■□□□ 1.35
SMN1-203ENST00000503079 CFAP53Q96M91 514 aa23.5■■□□□ 1.35
SMN1-203ENST00000503079 CACNA1SQ13698 1873 aa23.49■■□□□ 1.35
SMN1-203ENST00000503079 PIP4K2AP48426 406 aaPredicted RBP23.49■■□□□ 1.35
SMN1-203ENST00000503079 BCS1LQ9Y276 419 aa23.49■■□□□ 1.35
SMN1-203ENST00000503079 CCDC88AQ3V6T2 1871 aa23.48■■□□□ 1.35
SMN1-203ENST00000503079 A1BGP04217 495 aa23.48■■□□□ 1.35
SMN1-203ENST00000503079 TTC5Q8N0Z6 440 aa23.47■■□□□ 1.35
SMN1-203ENST00000503079 PLEKHF1Q96S99 279 aa23.47■■□□□ 1.35
SMN1-203ENST00000503079 FCHSD2O94868 740 aa23.46■■□□□ 1.35
SMN1-203ENST00000503079 ZNF526Q8TF50 670 aaPredicted RBP23.46■■□□□ 1.35
SMN1-203ENST00000503079 USP16Q9Y5T5 823 aa23.46■■□□□ 1.35
SMN1-203ENST00000503079 BTBD11A6QL63 1104 aa23.44■■□□□ 1.34
SMN1-203ENST00000503079 ZPR1O75312 459 aa23.44■■□□□ 1.34
SMN1-203ENST00000503079 GIGYF1O75420 1035 aaPredicted RBP23.44■■□□□ 1.34
SMN1-203ENST00000503079 TBC1D9BQ66K14 1250 aa23.44■■□□□ 1.34
SMN1-203ENST00000503079 PRELPP51888 382 aa23.43■■□□□ 1.34
SMN1-203ENST00000503079 NUDCQ9Y266 331 aa23.43■■□□□ 1.34
SMN1-203ENST00000503079 FMNL2Q96PY5 1086 aa23.42■■□□□ 1.34
SMN1-203ENST00000503079 TBC1D2BQ9UPU7 963 aa23.42■■□□□ 1.34
SMN1-203ENST00000503079 CAMTA2O94983 1202 aa23.41■■□□□ 1.34
SMN1-203ENST00000503079 SERPINB2P05120 415 aa23.41■■□□□ 1.34
SMN1-203ENST00000503079 THUMPD2Q9BTF0 503 aaKnown RBP23.41■■□□□ 1.34
SMN1-203ENST00000503079 MIS18AQ9NYP9 233 aa23.41■■□□□ 1.34
SMN1-203ENST00000503079 ARFGEF2Q9Y6D5 1785 aa23.41■■□□□ 1.34
SMN1-203ENST00000503079 TIAM2Q8IVF5 1701 aa23.4■■□□□ 1.34
SMN1-203ENST00000503079 NBPF26B4DH59 902 aa23.4■■□□□ 1.34
SMN1-203ENST00000503079 STARD3NLO95772 234 aa23.4■■□□□ 1.34
SMN1-203ENST00000503079 NBPF10Q6P3W6 841 aaKnown RBP23.4■■□□□ 1.34
SMN1-203ENST00000503079 CCDC24Q8N4L8 307 aa23.4■■□□□ 1.34
SMN1-203ENST00000503079 NBPF15Q8N660 670 aa23.4■■□□□ 1.34
SMN1-203ENST00000503079 FER1L6Q2WGJ9 1857 aa23.39■■□□□ 1.34
SMN1-203ENST00000503079 KIF3CO14782 793 aa23.39■■□□□ 1.33
SMN1-203ENST00000503079 BICDL1Q6ZP65 573 aa23.39■■□□□ 1.33
SMN1-203ENST00000503079 SLX4Q8IY92 1834 aa23.38■■□□□ 1.33
SMN1-203ENST00000503079 IL6STP40189 918 aaPredicted RBP23.38■■□□□ 1.33
SMN1-203ENST00000503079 ARHGAP27Q6ZUM4 889 aa23.38■■□□□ 1.33
SMN1-203ENST00000503079 PIM2Q9P1W9 311 aa23.38■■□□□ 1.33
SMN1-203ENST00000503079 TNRC6CQ9HCJ0 1690 aaKnown RBP23.38■■□□□ 1.33
SMN1-203ENST00000503079 NUP98P52948 1817 aa23.38■■□□□ 1.33
SMN1-203ENST00000503079 SENP3-EIF4A1A0A087X0R7 540 aa23.37■■□□□ 1.33
SMN1-203ENST00000503079 ZNF330Q9Y3S2 320 aaPredicted RBP23.37■■□□□ 1.33
SMN1-203ENST00000503079 GPBP1L1Q9HC44 474 aaPredicted RBP23.36■■□□□ 1.33
SMN1-203ENST00000503079 PRR5LQ6MZQ0 368 aa23.35■■□□□ 1.33
SMN1-203ENST00000503079 HTATSF1O43719 755 aaKnown RBP23.34■■□□□ 1.33
SMN1-203ENST00000503079 RASSF7Q02833 373 aa23.34■■□□□ 1.33
SMN1-203ENST00000503079 DALRD3Q5D0E6 543 aaKnown RBP23.34■■□□□ 1.33
SMN1-203ENST00000503079 TEX13AQ9BXU3 409 aaPredicted RBP23.34■■□□□ 1.33
SMN1-203ENST00000503079 DICER1Q9UPY3 1922 aaKnown RBP23.33■■□□□ 1.33
SMN1-203ENST00000503079 DDX10Q13206 875 aaKnown RBP23.33■■□□□ 1.33
SMN1-203ENST00000503079 NFE2L2Q16236 605 aa23.32■■□□□ 1.32
SMN1-203ENST00000503079 C9orf131Q5VYM1 1079 aa23.32■■□□□ 1.32
SMN1-203ENST00000503079 RTF1Q92541 710 aaKnown RBP23.32■■□□□ 1.32
SMN1-203ENST00000503079 A0A087WZG4 1122 aa23.31■■□□□ 1.32
SMN1-203ENST00000503079 TAF7Q15545 349 aaPredicted RBP23.31■■□□□ 1.32
SMN1-203ENST00000503079 DZIP3Q86Y13 1208 aaKnown RBP23.31■■□□□ 1.32
SMN1-203ENST00000503079 NMRK2Q9NPI5 230 aa23.31■■□□□ 1.32
SMN1-203ENST00000503079 SNRPA1P09661 255 aaKnown RBP23.3■■□□□ 1.32
SMN1-203ENST00000503079 NFKBIEO00221 500 aa23.29■■□□□ 1.32
SMN1-203ENST00000503079 C2CD5Q86YS7 1000 aa23.29■■□□□ 1.32
SMN1-203ENST00000503079 EIF4A1P60842 406 aaKnown RBP23.27■■□□□ 1.32
SMN1-203ENST00000503079 HLFQ16534 295 aa23.27■■□□□ 1.32
SMN1-203ENST00000503079 RNF181Q9P0P0 153 aa23.25■■□□□ 1.31
SMN1-203ENST00000503079 RALBP1Q15311 655 aa23.23■■□□□ 1.31
SMN1-203ENST00000503079 LRP10Q7Z4F1 713 aa23.23■■□□□ 1.31
SMN1-203ENST00000503079 TTLL6Q8N841 843 aa23.23■■□□□ 1.31
SMN1-203ENST00000503079 BRIP1Q9BX63 1249 aa23.23■■□□□ 1.31
SMN1-203ENST00000503079 ANKRD36CQ5JPF3 1778 aa23.22■■□□□ 1.31
SMN1-203ENST00000503079 TTLL7Q6ZT98 887 aa23.22■■□□□ 1.31
SMN1-203ENST00000503079 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
SMN1-203ENST00000503079 SLC51AQ86UW1 340 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms