RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 UBTFL1P0CB47 393 aaPredicted RBP29.63■■■□□ 2.33
DDX41-202ENST00000503078 PLEKHG5O94827 1062 aa29.62■■■□□ 2.33
DDX41-202ENST00000503078 GADD45BO75293 160 aaPredicted RBP29.62■■■□□ 2.33
DDX41-202ENST00000503078 USP48Q86UV5 1035 aa29.62■■■□□ 2.33
DDX41-202ENST00000503078 SSH3Q8TE77 659 aa29.62■■■□□ 2.33
DDX41-202ENST00000503078 SLC26A8Q96RN1 970 aa29.62■■■□□ 2.33
DDX41-202ENST00000503078 IL1RAPL2Q9NP60 686 aa29.62■■■□□ 2.33
DDX41-202ENST00000503078 GDPD2Q9HCC8 539 aa29.61■■■□□ 2.33
DDX41-202ENST00000503078 RAB11FIP3O75154 756 aa29.6■■■□□ 2.33
DDX41-202ENST00000503078 FOXD4L6Q3SYB3 417 aaPredicted RBP29.6■■■□□ 2.33
DDX41-202ENST00000503078 FOXD4L3Q6VB84 417 aaPredicted RBP29.6■■■□□ 2.33
DDX41-202ENST00000503078 NUTM1Q86Y26 1132 aa29.59■■■□□ 2.33
DDX41-202ENST00000503078 TMEM87AQ8NBN3 555 aa29.58■■■□□ 2.33
DDX41-202ENST00000503078 UQCRHLA0A096LP55 91 aa29.57■■■□□ 2.32
DDX41-202ENST00000503078 UQCRHP07919 91 aa29.57■■■□□ 2.32
DDX41-202ENST00000503078 BABAM1Q9NWV8 329 aa29.57■■■□□ 2.32
DDX41-202ENST00000503078 RPAP1Q9BWH6 1393 aaPredicted RBP29.57■■■□□ 2.32
DDX41-202ENST00000503078 PTMAP06454 111 aaKnown RBP29.57■■■□□ 2.32
DDX41-202ENST00000503078 RBM10P98175 930 aaKnown RBP29.57■■■□□ 2.32
DDX41-202ENST00000503078 RAD50Q92878 1312 aa29.57■■■□□ 2.32
DDX41-202ENST00000503078 FAM184AQ8NB25 1140 aa29.56■■■□□ 2.32
DDX41-202ENST00000503078 PLPPR3Q6T4P5 718 aa29.56■■■□□ 2.32
DDX41-202ENST00000503078 IL17REQ8NFR9 667 aa29.56■■■□□ 2.32
DDX41-202ENST00000503078 PI4K2BQ8TCG2 481 aa29.56■■■□□ 2.32
DDX41-202ENST00000503078 TBX22Q9Y458 520 aa29.56■■■□□ 2.32
DDX41-202ENST00000503078 SGSM2O43147 1006 aa29.55■■■□□ 2.32
DDX41-202ENST00000503078 TAF7Q15545 349 aaPredicted RBP29.55■■■□□ 2.32
DDX41-202ENST00000503078 MAP3K5Q99683 1374 aa29.55■■■□□ 2.32
DDX41-202ENST00000503078 SURF6O75683 361 aaKnown RBP29.55■■■□□ 2.32
DDX41-202ENST00000503078 POLA2Q14181 598 aa29.55■■■□□ 2.32
DDX41-202ENST00000503078 UVSSAQ2YD98 709 aa29.55■■■□□ 2.32
DDX41-202ENST00000503078 PPP1R42Q7Z4L9 355 aa29.55■■■□□ 2.32
DDX41-202ENST00000503078 THEMISQ8N1K5 641 aaPredicted RBP29.54■■■□□ 2.32
DDX41-202ENST00000503078 MAP7D2Q96T17 732 aa29.54■■■□□ 2.32
DDX41-202ENST00000503078 NGDNQ8NEJ9 315 aaKnown RBP29.54■■■□□ 2.32
DDX41-202ENST00000503078 RHPN1Q8TCX5 695 aa29.54■■■□□ 2.32
DDX41-202ENST00000503078 ZMYND15Q9H091 742 aa29.54■■■□□ 2.32
DDX41-202ENST00000503078 SNX14Q9Y5W7 946 aa29.54■■■□□ 2.32
DDX41-202ENST00000503078 MAP4K4O95819 1239 aaPredicted RBP29.53■■■□□ 2.32
DDX41-202ENST00000503078 TTC14Q96N46 770 aa29.53■■■□□ 2.32
DDX41-202ENST00000503078 AMOTL2Q9Y2J4 779 aa29.53■■■□□ 2.32
DDX41-202ENST00000503078 TCHHQ07283 1943 aa29.53■■■□□ 2.32
DDX41-202ENST00000503078 SASS6Q6UVJ0 657 aa29.53■■■□□ 2.32
DDX41-202ENST00000503078 TRHP20396 242 aaPredicted RBP29.52■■■□□ 2.32
DDX41-202ENST00000503078 CCDC183Q5T5S1 534 aa29.52■■■□□ 2.32
DDX41-202ENST00000503078 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.52■■■□□ 2.32
DDX41-202ENST00000503078 PIK3C2AO00443 1686 aa29.52■■■□□ 2.32
DDX41-202ENST00000503078 KIAA2012Q0VF49 1180 aa29.52■■■□□ 2.32
DDX41-202ENST00000503078 HDGFL1Q5TGJ6 251 aa29.52■■■□□ 2.32
DDX41-202ENST00000503078 FAM13BQ9NYF5 915 aa29.52■■■□□ 2.32
DDX41-202ENST00000503078 ZSCAN22P10073 491 aaPredicted RBP29.51■■■□□ 2.31
DDX41-202ENST00000503078 LSG1Q9H089 658 aaKnown RBP29.51■■■□□ 2.31
DDX41-202ENST00000503078 PHAXQ9H814 394 aaKnown RBP29.51■■■□□ 2.31
DDX41-202ENST00000503078 CNTROBQ8N137 903 aa29.5■■■□□ 2.31
DDX41-202ENST00000503078 KIF1BPQ96EK5 621 aa29.5■■■□□ 2.31
DDX41-202ENST00000503078 DYNC1I1O14576 645 aa29.5■■■□□ 2.31
DDX41-202ENST00000503078 CNPY2Q9Y2B0 182 aa29.5■■■□□ 2.31
DDX41-202ENST00000503078 DIP2AQ14689 1571 aa29.49■■■□□ 2.31
DDX41-202ENST00000503078 NWD1Q149M9 1564 aa29.49■■■□□ 2.31
DDX41-202ENST00000503078 LETM1O95202 739 aaPredicted RBP29.49■■■□□ 2.31
DDX41-202ENST00000503078 AK2P54819 239 aa29.49■■■□□ 2.31
DDX41-202ENST00000503078 LIMCH1Q9UPQ0 1083 aa29.49■■■□□ 2.31
DDX41-202ENST00000503078 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.49■■■□□ 2.31
DDX41-202ENST00000503078 HOXC9P31274 260 aa29.48■■■□□ 2.31
DDX41-202ENST00000503078 SRGAP3O43295 1099 aa29.48■■■□□ 2.31
DDX41-202ENST00000503078 STX6O43752 255 aa29.47■■■□□ 2.31
DDX41-202ENST00000503078 RASEFQ8IZ41 740 aa29.47■■■□□ 2.31
DDX41-202ENST00000503078 NLRP6P59044 892 aa29.47■■■□□ 2.31
DDX41-202ENST00000503078 UBE2HP62256 183 aa29.47■■■□□ 2.31
DDX41-202ENST00000503078 RUFY3Q7L099 469 aa29.47■■■□□ 2.31
DDX41-202ENST00000503078 SYT1P21579 422 aa29.46■■■□□ 2.31
DDX41-202ENST00000503078 RGPD8O14715 1765 aaPredicted RBP29.46■■■□□ 2.31
DDX41-202ENST00000503078 F13A1P00488 732 aa29.44■■■□□ 2.3
DDX41-202ENST00000503078 USP25Q9UHP3 1055 aa29.44■■■□□ 2.3
DDX41-202ENST00000503078 SMC3Q9UQE7 1217 aa29.44■■■□□ 2.3
DDX41-202ENST00000503078 ATP6V1DQ9Y5K8 247 aa29.44■■■□□ 2.3
DDX41-202ENST00000503078 CRYBG1Q9Y4K1 1723 aa29.43■■■□□ 2.3
DDX41-202ENST00000503078 NBPF7P0C2Y1 421 aaPredicted RBP29.43■■■□□ 2.3
DDX41-202ENST00000503078 CWC27Q6UX04 472 aaKnown RBP29.43■■■□□ 2.3
DDX41-202ENST00000503078 HSP90AB4PQ58FF6 505 aa29.42■■■□□ 2.3
DDX41-202ENST00000503078 USP42Q9H9J4 1324 aaKnown RBP29.42■■■□□ 2.3
DDX41-202ENST00000503078 MTERF4Q7Z6M4 381 aaKnown RBP29.42■■■□□ 2.3
DDX41-202ENST00000503078 PKNOX2Q96KN3 472 aa29.41■■■□□ 2.3
DDX41-202ENST00000503078 LARP6Q9BRS8 491 aaKnown RBP29.41■■■□□ 2.3
DDX41-202ENST00000503078 SPG7Q9UQ90 795 aa29.41■■■□□ 2.3
DDX41-202ENST00000503078 TTC41PQ6P2S7 1318 aa29.4■■■□□ 2.3
DDX41-202ENST00000503078 ADCY5O95622 1261 aa29.4■■■□□ 2.3
DDX41-202ENST00000503078 HCLS1P14317 486 aaPredicted RBP29.4■■■□□ 2.3
DDX41-202ENST00000503078 KLHL34Q8N239 644 aa29.4■■■□□ 2.3
DDX41-202ENST00000503078 BEND3Q5T5X7 828 aa29.4■■■□□ 2.3
DDX41-202ENST00000503078 PIBF1Q8WXW3 757 aa29.4■■■□□ 2.3
DDX41-202ENST00000503078 CASTP20810 708 aaKnown RBP29.39■■■□□ 2.3
DDX41-202ENST00000503078 GLRX3O76003 335 aaKnown RBP29.39■■■□□ 2.29
DDX41-202ENST00000503078 EIF2S2P20042 333 aaKnown RBP29.39■■■□□ 2.29
DDX41-202ENST00000503078 DNAAF4Q8WXU2 420 aa29.39■■■□□ 2.29
DDX41-202ENST00000503078 LTV1Q96GA3 475 aaPredicted RBP29.39■■■□□ 2.29
DDX41-202ENST00000503078 HYPKQ9NX55 129 aa29.39■■■□□ 2.29
DDX41-202ENST00000503078 FIBPO43427 364 aa29.38■■■□□ 2.29
DDX41-202ENST00000503078 MARF1Q9Y4F3 1742 aaKnown RBP29.37■■■□□ 2.29
DDX41-202ENST00000503078 RUFY2Q8WXA3 655 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms