RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 AKAP4Q5JQC9 854 aa20.01■□□□□ 0.79
SEC61A1-207ENST00000498837 SLC52A2Q9HAB3 445 aa20.01■□□□□ 0.79
SEC61A1-207ENST00000498837 RRAGCQ9HB90 399 aa20.01■□□□□ 0.79
SEC61A1-207ENST00000498837 SOS1Q07889 1333 aaPredicted RBP20.01■□□□□ 0.79
SEC61A1-207ENST00000498837 KNSTRNQ9Y448 316 aa20■□□□□ 0.79
SEC61A1-207ENST00000498837 KDM2BQ8NHM5 1336 aa20■□□□□ 0.79
SEC61A1-207ENST00000498837 CYP19A1P11511 503 aaPredicted RBP19.99■□□□□ 0.79
SEC61A1-207ENST00000498837 UBR2Q8IWV8 1755 aa19.98■□□□□ 0.79
SEC61A1-207ENST00000498837 RNMTO43148 476 aaKnown RBP19.98■□□□□ 0.79
SEC61A1-207ENST00000498837 MRC1P22897 1456 aa19.98■□□□□ 0.79
SEC61A1-207ENST00000498837 HMOX1P09601 288 aa19.97■□□□□ 0.79
SEC61A1-207ENST00000498837 RASSF7Q02833 373 aa19.97■□□□□ 0.79
SEC61A1-207ENST00000498837 FSTL1Q12841 308 aa19.97■□□□□ 0.79
SEC61A1-207ENST00000498837 NFIXQ14938 502 aa19.97■□□□□ 0.79
SEC61A1-207ENST00000498837 NARFQ9UHQ1 456 aa19.96■□□□□ 0.79
SEC61A1-207ENST00000498837 ZBTB1Q9Y2K1 713 aa19.96■□□□□ 0.79
SEC61A1-207ENST00000498837 ANKRD31Q8N7Z5 1873 aa19.96■□□□□ 0.79
SEC61A1-207ENST00000498837 TIAM2Q8IVF5 1701 aa19.96■□□□□ 0.79
SEC61A1-207ENST00000498837 COL15A1P39059 1388 aa19.95■□□□□ 0.79
SEC61A1-207ENST00000498837 AMER1Q5JTC6 1135 aaPredicted RBP19.95■□□□□ 0.78
SEC61A1-207ENST00000498837 KLRG1Q96E93 195 aa19.95■□□□□ 0.78
SEC61A1-207ENST00000498837 BCL2L12Q9HB09 334 aa19.95■□□□□ 0.78
SEC61A1-207ENST00000498837 DICER1Q9UPY3 1922 aaKnown RBP19.95■□□□□ 0.78
SEC61A1-207ENST00000498837 PCNTO95613 3336 aa19.94■□□□□ 0.78
SEC61A1-207ENST00000498837 SERPINB2P05120 415 aa19.94■□□□□ 0.78
SEC61A1-207ENST00000498837 PRELPP51888 382 aa19.94■□□□□ 0.78
SEC61A1-207ENST00000498837 CACNA1SQ13698 1873 aa19.94■□□□□ 0.78
SEC61A1-207ENST00000498837 MTHFSDQ2M296 383 aaKnown RBP19.93■□□□□ 0.78
SEC61A1-207ENST00000498837 JMYQ8N9B5 988 aa19.92■□□□□ 0.78
SEC61A1-207ENST00000498837 SIPA1L3O60292 1781 aaPredicted RBP19.91■□□□□ 0.78
SEC61A1-207ENST00000498837 CANXP27824 592 aaKnown RBP19.91■□□□□ 0.78
SEC61A1-207ENST00000498837 CARMIL3Q8ND23 1372 aa19.91■□□□□ 0.78
SEC61A1-207ENST00000498837 FER1L6Q2WGJ9 1857 aa19.9■□□□□ 0.78
SEC61A1-207ENST00000498837 LMNB1P20700 586 aa19.9■□□□□ 0.78
SEC61A1-207ENST00000498837 VSIG10Q8N0Z9 540 aa19.9■□□□□ 0.78
SEC61A1-207ENST00000498837 TTLL6Q8N841 843 aa19.9■□□□□ 0.78
SEC61A1-207ENST00000498837 SMC1BQ8NDV3 1235 aa19.9■□□□□ 0.78
SEC61A1-207ENST00000498837 GLTPD2A6NH11 291 aa19.89■□□□□ 0.77
SEC61A1-207ENST00000498837 COL13A1Q5TAT6 717 aaPredicted RBP19.89■□□□□ 0.77
SEC61A1-207ENST00000498837 BICDL1Q6ZP65 573 aa19.89■□□□□ 0.77
SEC61A1-207ENST00000498837 C2CD5Q86YS7 1000 aa19.89■□□□□ 0.77
SEC61A1-207ENST00000498837 COL11A2P13942 1736 aaPredicted RBP19.88■□□□□ 0.77
SEC61A1-207ENST00000498837 ZC3H4Q9UPT8 1303 aaKnown RBP19.88■□□□□ 0.77
SEC61A1-207ENST00000498837 H0YIN7 160 aa19.87■□□□□ 0.77
SEC61A1-207ENST00000498837 DIAPH1O60610 1272 aaKnown RBP19.87■□□□□ 0.77
SEC61A1-207ENST00000498837 EIF5P55010 431 aaKnown RBP19.87■□□□□ 0.77
SEC61A1-207ENST00000498837 SCN7AQ01118 1682 aa19.87■□□□□ 0.77
SEC61A1-207ENST00000498837 NFKBIEO00221 500 aa19.86■□□□□ 0.77
SEC61A1-207ENST00000498837 VEGFAP15692 232 aaPredicted RBP19.86■□□□□ 0.77
SEC61A1-207ENST00000498837 KIF7Q2M1P5 1343 aa19.85■□□□□ 0.77
SEC61A1-207ENST00000498837 SLX4Q8IY92 1834 aa19.85■□□□□ 0.77
SEC61A1-207ENST00000498837 PER1O15534 1290 aaPredicted RBP19.84■□□□□ 0.77
SEC61A1-207ENST00000498837 STARD3NLO95772 234 aa19.84■□□□□ 0.77
SEC61A1-207ENST00000498837 CC2D1BQ5T0F9 858 aaKnown RBP19.84■□□□□ 0.77
SEC61A1-207ENST00000498837 TBC1D9BQ66K14 1250 aa19.84■□□□□ 0.77
SEC61A1-207ENST00000498837 TTC5Q8N0Z6 440 aa19.84■□□□□ 0.77
SEC61A1-207ENST00000498837 ZNF496Q96IT1 587 aaPredicted RBP19.84■□□□□ 0.77
SEC61A1-207ENST00000498837 POTECB2RU33 542 aa19.83■□□□□ 0.77
SEC61A1-207ENST00000498837 CCDC24Q8N4L8 307 aa19.83■□□□□ 0.77
SEC61A1-207ENST00000498837 ZNF219Q9P2Y4 722 aaPredicted RBP19.83■□□□□ 0.77
SEC61A1-207ENST00000498837 A0A087WZG4 1122 aa19.82■□□□□ 0.76
SEC61A1-207ENST00000498837 IL17REQ8NFR9 667 aa19.82■□□□□ 0.76
SEC61A1-207ENST00000498837 ZNF622Q969S3 477 aaKnown RBP eCLIP19.82■□□□□ 0.76
SEC61A1-207ENST00000498837 TBC1D2BQ9UPU7 963 aa19.82■□□□□ 0.76
SEC61A1-207ENST00000498837 HEG1Q9ULI3 1381 aa19.82■□□□□ 0.76
SEC61A1-207ENST00000498837 BCORQ6W2J9 1755 aa19.81■□□□□ 0.76
SEC61A1-207ENST00000498837 ARFGEF2Q9Y6D5 1785 aa19.81■□□□□ 0.76
SEC61A1-207ENST00000498837 C21orf2O43822 256 aa19.81■□□□□ 0.76
SEC61A1-207ENST00000498837 ZNF330Q9Y3S2 320 aaPredicted RBP19.81■□□□□ 0.76
SEC61A1-207ENST00000498837 COL3A1P02461 1466 aaPredicted RBP19.8■□□□□ 0.76
SEC61A1-207ENST00000498837 TEFQ10587 303 aa19.8■□□□□ 0.76
SEC61A1-207ENST00000498837 PRR5LQ6MZQ0 368 aa19.8■□□□□ 0.76
SEC61A1-207ENST00000498837 ZNF790Q6PG37 636 aa19.8■□□□□ 0.76
SEC61A1-207ENST00000498837 BRIP1Q9BX63 1249 aa19.8■□□□□ 0.76
SEC61A1-207ENST00000498837 GNAT3A8MTJ3 354 aa19.79■□□□□ 0.76
SEC61A1-207ENST00000498837 CNGB1Q14028 1251 aaPredicted RBP19.79■□□□□ 0.76
SEC61A1-207ENST00000498837 CCER1Q8TC90 406 aaPredicted RBP19.79■□□□□ 0.76
SEC61A1-207ENST00000498837 U2SURPO15042 1029 aaKnown RBP19.78■□□□□ 0.76
SEC61A1-207ENST00000498837 A1BGP04217 495 aa19.78■□□□□ 0.76
SEC61A1-207ENST00000498837 PDE6BP35913 854 aa19.78■□□□□ 0.76
SEC61A1-207ENST00000498837 DPY19L2Q6NUT2 758 aa19.78■□□□□ 0.76
SEC61A1-207ENST00000498837 TEX13AQ9BXU3 409 aaPredicted RBP19.78■□□□□ 0.76
SEC61A1-207ENST00000498837 CAPN15O75808 1086 aa19.77■□□□□ 0.76
SEC61A1-207ENST00000498837 IL6STP40189 918 aaPredicted RBP19.77■□□□□ 0.76
SEC61A1-207ENST00000498837 ERFEQ4G0M1 354 aa19.77■□□□□ 0.76
SEC61A1-207ENST00000498837 KCNQ3O43525 872 aa19.76■□□□□ 0.75
SEC61A1-207ENST00000498837 TNS4Q8IZW8 715 aa19.76■□□□□ 0.75
SEC61A1-207ENST00000498837 GAS2L2Q8NHY3 880 aa19.76■□□□□ 0.75
SEC61A1-207ENST00000498837 PDZRN3Q9UPQ7 1066 aa19.76■□□□□ 0.75
SEC61A1-207ENST00000498837 CAMTA2O94983 1202 aa19.75■□□□□ 0.75
SEC61A1-207ENST00000498837 HSPA1AP0DMV8 641 aaKnown RBP19.75■□□□□ 0.75
SEC61A1-207ENST00000498837 HSPA1BP0DMV9 641 aaKnown RBP19.75■□□□□ 0.75
SEC61A1-207ENST00000498837 FMNL2Q96PY5 1086 aa19.75■□□□□ 0.75
SEC61A1-207ENST00000498837 SETDB2Q96T68 719 aa19.74■□□□□ 0.75
SEC61A1-207ENST00000498837 CNBD1Q8NA66 436 aa19.73■□□□□ 0.75
SEC61A1-207ENST00000498837 CEMIPQ8WUJ3 1361 aa19.72■□□□□ 0.75
SEC61A1-207ENST00000498837 SCN4AP35499 1836 aa19.72■□□□□ 0.75
SEC61A1-207ENST00000498837 NPHP1O15259 732 aa19.72■□□□□ 0.75
SEC61A1-207ENST00000498837 DDNO94850 711 aaPredicted RBP19.72■□□□□ 0.75
SEC61A1-207ENST00000498837 POTEIP0CG38 1075 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms