RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	ANP32C	O43423	234 aa		13.86	□□□□□ -0.19
FXR1-222	ENST00000498658	CYP19A1	P11511	503 aa	Predicted RBP	13.86	□□□□□ -0.19
FXR1-222	ENST00000498658	AMIGO3	Q86WK7	504 aa		13.86	□□□□□ -0.19
FXR1-222	ENST00000498658	NLGN1	Q8N2Q7	840 aa		13.86	□□□□□ -0.19
FXR1-222	ENST00000498658	SYT17	Q9BSW7	474 aa		13.86	□□□□□ -0.19
FXR1-222	ENST00000498658	CCDC87	Q9NVE4	849 aa		13.86	□□□□□ -0.19
FXR1-222	ENST00000498658	MSL1	Q68DK7	614 aa		13.85	□□□□□ -0.19
FXR1-222	ENST00000498658	INTS5	Q6P9B9	1019 aa	Known RBP	13.85	□□□□□ -0.19
FXR1-222	ENST00000498658	ARHGEF1	Q92888	912 aa	Known RBP	13.85	□□□□□ -0.19
FXR1-222	ENST00000498658	RUNDC1	Q96C34	613 aa		13.85	□□□□□ -0.19
FXR1-222	ENST00000498658	ZNF496	Q96IT1	587 aa	Predicted RBP	13.85	□□□□□ -0.19
FXR1-222	ENST00000498658	MYH14	Q7Z406	1995 aa	Known RBP	13.85	□□□□□ -0.19
FXR1-222	ENST00000498658	DLG5	Q8TDM6	1919 aa		13.84	□□□□□ -0.19
FXR1-222	ENST00000498658	RIPK4	P57078	832 aa		13.84	□□□□□ -0.19
FXR1-222	ENST00000498658	DCTN1	Q14203	1278 aa		13.84	□□□□□ -0.19
FXR1-222	ENST00000498658		A0A087WZG4	1122 aa		13.83	□□□□□ -0.2
FXR1-222	ENST00000498658	TMPO	P42166	694 aa	Known RBP	13.83	□□□□□ -0.2
FXR1-222	ENST00000498658	NPM2	Q86SE8	214 aa	Known RBP	13.83	□□□□□ -0.2
FXR1-222	ENST00000498658	ADAMTS8	Q9UP79	889 aa		13.83	□□□□□ -0.2
FXR1-222	ENST00000498658	ZPR1	O75312	459 aa		13.82	□□□□□ -0.2
FXR1-222	ENST00000498658	SNRPA1	P09661	255 aa	Known RBP	13.82	□□□□□ -0.2
FXR1-222	ENST00000498658	SMIM5	Q71RC9	77 aa		13.82	□□□□□ -0.2
FXR1-222	ENST00000498658	KLHL34	Q8N239	644 aa		13.82	□□□□□ -0.2
FXR1-222	ENST00000498658	BABAM1	Q9NWV8	329 aa		13.82	□□□□□ -0.2
FXR1-222	ENST00000498658	CD2AP	Q9Y5K6	639 aa		13.82	□□□□□ -0.2
FXR1-222	ENST00000498658	SOS1	Q07889	1333 aa	Predicted RBP	13.82	□□□□□ -0.2
FXR1-222	ENST00000498658	GYS1	P13807	737 aa		13.81	□□□□□ -0.2
FXR1-222	ENST00000498658	USP42	Q9H9J4	1324 aa	Known RBP	13.81	□□□□□ -0.2
FXR1-222	ENST00000498658	MMP10	P09238	476 aa		13.8	□□□□□ -0.2
FXR1-222	ENST00000498658	IL6ST	P40189	918 aa	Predicted RBP	13.8	□□□□□ -0.2
FXR1-222	ENST00000498658	CCDC146	Q8IYE0	955 aa		13.8	□□□□□ -0.2
FXR1-222	ENST00000498658	NARF	Q9UHQ1	456 aa		13.8	□□□□□ -0.2
FXR1-222	ENST00000498658	ZBTB1	Q9Y2K1	713 aa		13.8	□□□□□ -0.2
FXR1-222	ENST00000498658	COL15A1	P39059	1388 aa		13.8	□□□□□ -0.2
FXR1-222	ENST00000498658	C4A	P0C0L4	1744 aa		13.79	□□□□□ -0.2
FXR1-222	ENST00000498658	KCNQ3	O43525	872 aa		13.79	□□□□□ -0.2
FXR1-222	ENST00000498658	CANX	P27824	592 aa	Known RBP	13.79	□□□□□ -0.2
FXR1-222	ENST00000498658	EIF5	P55010	431 aa	Known RBP	13.78	□□□□□ -0.2
FXR1-222	ENST00000498658	PARP3	Q9Y6F1	533 aa		13.78	□□□□□ -0.2
FXR1-222	ENST00000498658	NEUROD2	Q15784	382 aa		13.77	□□□□□ -0.21
FXR1-222	ENST00000498658	THUMPD2	Q9BTF0	503 aa	Known RBP	13.77	□□□□□ -0.21
FXR1-222	ENST00000498658	MIS18A	Q9NYP9	233 aa		13.77	□□□□□ -0.21
FXR1-222	ENST00000498658	TSPYL4	Q9UJ04	414 aa		13.77	□□□□□ -0.21
FXR1-222	ENST00000498658	USP16	Q9Y5T5	823 aa		13.77	□□□□□ -0.21
FXR1-222	ENST00000498658	CALD1	Q05682	793 aa	Known RBP	13.76	□□□□□ -0.21
FXR1-222	ENST00000498658	USPL1	Q5W0Q7	1092 aa		13.76	□□□□□ -0.21
FXR1-222	ENST00000498658	SRP68	Q9UHB9	627 aa	Known RBP	13.76	□□□□□ -0.21
FXR1-222	ENST00000498658	RRP7A	Q9Y3A4	280 aa	Known RBP	13.76	□□□□□ -0.21
FXR1-222	ENST00000498658	KDM3B	Q7LBC6	1761 aa		13.76	□□□□□ -0.21
FXR1-222	ENST00000498658	GIGYF1	O75420	1035 aa	Predicted RBP	13.75	□□□□□ -0.21
FXR1-222	ENST00000498658	A1BG	P04217	495 aa		13.75	□□□□□ -0.21
FXR1-222	ENST00000498658	EIF4A1	P60842	406 aa	Known RBP	13.75	□□□□□ -0.21
FXR1-222	ENST00000498658	FKBP8	Q14318	412 aa		13.75	□□□□□ -0.21
FXR1-222	ENST00000498658	GPR162	Q16538	588 aa		13.75	□□□□□ -0.21
FXR1-222	ENST00000498658	MRS2	Q9HD23	443 aa		13.75	□□□□□ -0.21
FXR1-222	ENST00000498658	TM4SF1	P30408	202 aa		13.74	□□□□□ -0.21
FXR1-222	ENST00000498658	TGFB2	P61812	414 aa		13.74	□□□□□ -0.21
FXR1-222	ENST00000498658	NLGN2	Q8NFZ4	835 aa		13.74	□□□□□ -0.21
FXR1-222	ENST00000498658	TRIM35	Q9UPQ4	493 aa		13.74	□□□□□ -0.21
FXR1-222	ENST00000498658	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.74	□□□□□ -0.21
FXR1-222	ENST00000498658	RGL2	O15211	777 aa		13.73	□□□□□ -0.21
FXR1-222	ENST00000498658	GRIN3B	O60391	1043 aa		13.73	□□□□□ -0.21
FXR1-222	ENST00000498658	LAMB4	A4D0S4	1761 aa		13.73	□□□□□ -0.21
FXR1-222	ENST00000498658	ERBB4	Q15303	1308 aa		13.72	□□□□□ -0.21
FXR1-222	ENST00000498658	CHL1	O00533	1208 aa		13.72	□□□□□ -0.21
FXR1-222	ENST00000498658	APAF1	O14727	1248 aa		13.72	□□□□□ -0.21
FXR1-222	ENST00000498658	CLEC4G	Q6UXB4	293 aa		13.72	□□□□□ -0.21
FXR1-222	ENST00000498658	DZIP3	Q86Y13	1208 aa	Known RBP	13.72	□□□□□ -0.21
FXR1-222	ENST00000498658	TBC1D2B	Q9UPU7	963 aa		13.72	□□□□□ -0.21
FXR1-222	ENST00000498658	ZNF652	Q9Y2D9	606 aa		13.72	□□□□□ -0.21
FXR1-222	ENST00000498658	GOLGB1	Q14789	3259 aa	Known RBP	13.72	□□□□□ -0.21
FXR1-222	ENST00000498658	KIF13B	Q9NQT8	1826 aa		13.71	□□□□□ -0.21
FXR1-222	ENST00000498658	UTRN	P46939	3433 aa		13.71	□□□□□ -0.21
FXR1-222	ENST00000498658	PRAMEF22	A3QJZ6	481 aa		13.71	□□□□□ -0.21
FXR1-222	ENST00000498658	POLRMT	O00411	1230 aa	Known RBP	13.71	□□□□□ -0.21
FXR1-222	ENST00000498658	PELP1	Q8IZL8	1130 aa	Known RBP	13.71	□□□□□ -0.21
FXR1-222	ENST00000498658	CFAP44	Q96MT7	982 aa		13.71	□□□□□ -0.21
FXR1-222	ENST00000498658	C10orf71	Q711Q0	1435 aa		13.71	□□□□□ -0.22
FXR1-222	ENST00000498658	DDR1	Q08345	913 aa		13.7	□□□□□ -0.22
FXR1-222	ENST00000498658	NFIX	Q14938	502 aa		13.7	□□□□□ -0.22
FXR1-222	ENST00000498658	CCDC184	Q52MB2	194 aa		13.7	□□□□□ -0.22
FXR1-222	ENST00000498658	BCL2L12	Q9HB09	334 aa		13.7	□□□□□ -0.22
FXR1-222	ENST00000498658	LAS1L	Q9Y4W2	734 aa	Known RBP	13.7	□□□□□ -0.22
FXR1-222	ENST00000498658	SCN7A	Q01118	1682 aa		13.69	□□□□□ -0.22
FXR1-222	ENST00000498658	NBPF26	B4DH59	902 aa		13.69	□□□□□ -0.22
FXR1-222	ENST00000498658	CAMTA2	O94983	1202 aa		13.69	□□□□□ -0.22
FXR1-222	ENST00000498658	GNAI1	P63096	354 aa		13.69	□□□□□ -0.22
FXR1-222	ENST00000498658	CCDC27	Q2M243	656 aa		13.69	□□□□□ -0.22
FXR1-222	ENST00000498658	NBPF10	Q6P3W6	841 aa	Known RBP	13.69	□□□□□ -0.22
FXR1-222	ENST00000498658	NBPF15	Q8N660	670 aa		13.69	□□□□□ -0.22
FXR1-222	ENST00000498658	SETDB2	Q96T68	719 aa		13.69	□□□□□ -0.22
FXR1-222	ENST00000498658	IFT57	Q9NWB7	429 aa		13.69	□□□□□ -0.22
FXR1-222	ENST00000498658	CARMIL3	Q8ND23	1372 aa		13.69	□□□□□ -0.22
FXR1-222	ENST00000498658	SERPINB2	P05120	415 aa		13.68	□□□□□ -0.22
FXR1-222	ENST00000498658	HOXB7	P09629	217 aa		13.68	□□□□□ -0.22
FXR1-222	ENST00000498658	YY1	P25490	414 aa		13.68	□□□□□ -0.22
FXR1-222	ENST00000498658	KIF6	Q6ZMV9	814 aa		13.68	□□□□□ -0.22
FXR1-222	ENST00000498658	CHMP4A	Q9BY43	222 aa		13.68	□□□□□ -0.22
FXR1-222	ENST00000498658	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.68	□□□□□ -0.22
FXR1-222	ENST00000498658	ERVV-1	B6SEH8	477 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms