RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 NARFQ9UHQ1 456 aa34.13■■■■□ 3.05
MKRN1-216ENST00000498535 ADAMTS7Q9UKP4 1686 aa34.12■■■■□ 3.05
MKRN1-216ENST00000498535 COL15A1P39059 1388 aa34.12■■■■□ 3.05
MKRN1-216ENST00000498535 ZBTB1Q9Y2K1 713 aa34.12■■■■□ 3.05
MKRN1-216ENST00000498535 GAS2L2Q8NHY3 880 aa34.11■■■■□ 3.05
MKRN1-216ENST00000498535 CHRNA5P30532 468 aa34.1■■■■□ 3.05
MKRN1-216ENST00000498535 TEFQ10587 303 aa34.1■■■■□ 3.05
MKRN1-216ENST00000498535 COL3A1P02461 1466 aaPredicted RBP34.09■■■■□ 3.05
MKRN1-216ENST00000498535 GNAT3A8MTJ3 354 aa34.09■■■■□ 3.05
MKRN1-216ENST00000498535 STARD3NLO95772 234 aa34.09■■■■□ 3.05
MKRN1-216ENST00000498535 ARFGEF1Q9Y6D6 1849 aa34.09■■■■□ 3.05
MKRN1-216ENST00000498535 CANXP27824 592 aaKnown RBP34.07■■■■□ 3.04
MKRN1-216ENST00000498535 NFIXQ14938 502 aa34.07■■■■□ 3.04
MKRN1-216ENST00000498535 C9orf131Q5VYM1 1079 aa34.07■■■■□ 3.04
MKRN1-216ENST00000498535 CFAP53Q96M91 514 aa34.05■■■■□ 3.04
MKRN1-216ENST00000498535 IL17REQ8NFR9 667 aa34.04■■■■□ 3.04
MKRN1-216ENST00000498535 UBR2Q8IWV8 1755 aa34.03■■■■□ 3.04
MKRN1-216ENST00000498535 TEX13AQ9BXU3 409 aaPredicted RBP34.03■■■■□ 3.04
MKRN1-216ENST00000498535 A0A087WZG4 1122 aa34.02■■■■□ 3.04
MKRN1-216ENST00000498535 ZNF790Q6PG37 636 aa34.02■■■■□ 3.04
MKRN1-216ENST00000498535 TOMM70O94826 608 aa34.01■■■■□ 3.03
MKRN1-216ENST00000498535 SERPINB2P05120 415 aa34.01■■■■□ 3.03
MKRN1-216ENST00000498535 ZNF496Q96IT1 587 aaPredicted RBP34.01■■■■□ 3.03
MKRN1-216ENST00000498535 BCL2L12Q9HB09 334 aa34■■■■□ 3.03
MKRN1-216ENST00000498535 NMRK2Q9NPI5 230 aa34■■■■□ 3.03
MKRN1-216ENST00000498535 RNF181Q9P0P0 153 aa34■■■■□ 3.03
MKRN1-216ENST00000498535 EIF5P55010 431 aaKnown RBP33.99■■■■□ 3.03
MKRN1-216ENST00000498535 HEG1Q9ULI3 1381 aa33.98■■■■□ 3.03
MKRN1-216ENST00000498535 NUDCQ9Y266 331 aa33.98■■■■□ 3.03
MKRN1-216ENST00000498535 AFDNP55196 1824 aaKnown RBP33.97■■■■□ 3.03
MKRN1-216ENST00000498535 PRKAR2BP31323 418 aa33.96■■■■□ 3.03
MKRN1-216ENST00000498535 BICDL1Q6ZP65 573 aa33.96■■■■□ 3.03
MKRN1-216ENST00000498535 NPM2Q86SE8 214 aaKnown RBP33.96■■■■□ 3.03
MKRN1-216ENST00000498535 FMNL2Q96PY5 1086 aa33.96■■■■□ 3.03
MKRN1-216ENST00000498535 C16orf71Q8IYS4 520 aaPredicted RBP33.95■■■■□ 3.03
MKRN1-216ENST00000498535 ZNF330Q9Y3S2 320 aaPredicted RBP33.95■■■■□ 3.03
MKRN1-216ENST00000498535 KDM2BQ8NHM5 1336 aa33.95■■■■□ 3.03
MKRN1-216ENST00000498535 PHACTR3Q96KR7 559 aa33.94■■■■□ 3.02
MKRN1-216ENST00000498535 NRXN2Q9P2S2 1712 aa33.93■■■■□ 3.02
MKRN1-216ENST00000498535 RSPH6AQ9H0K4 717 aa33.93■■■■□ 3.02
MKRN1-216ENST00000498535 H0YIN7 160 aa33.92■■■■□ 3.02
MKRN1-216ENST00000498535 APLP1P51693 650 aa33.92■■■■□ 3.02
MKRN1-216ENST00000498535 C2CD5Q86YS7 1000 aa33.92■■■■□ 3.02
MKRN1-216ENST00000498535 TTLL6Q8N841 843 aa33.92■■■■□ 3.02
MKRN1-216ENST00000498535 CEMIPQ8WUJ3 1361 aa33.92■■■■□ 3.02
MKRN1-216ENST00000498535 BTBD11A6QL63 1104 aa33.91■■■■□ 3.02
MKRN1-216ENST00000498535 IL6STP40189 918 aaPredicted RBP33.91■■■■□ 3.02
MKRN1-216ENST00000498535 SIPA1L3O60292 1781 aaPredicted RBP33.9■■■■□ 3.02
MKRN1-216ENST00000498535 TBC1D2BQ9UPU7 963 aa33.9■■■■□ 3.02
MKRN1-216ENST00000498535 U2AF1L5P0DN76 240 aaPredicted RBP33.89■■■■□ 3.02
MKRN1-216ENST00000498535 U2AF1Q01081 240 aaKnown RBP eCLIP33.89■■■■□ 3.02
MKRN1-216ENST00000498535 TBC1D9BQ66K14 1250 aa33.88■■■■□ 3.01
MKRN1-216ENST00000498535 RBM46Q8TBY0 533 aaKnown RBP33.88■■■■□ 3.01
MKRN1-216ENST00000498535 RTF1Q92541 710 aaKnown RBP33.87■■■■□ 3.01
MKRN1-216ENST00000498535 SBF1O95248 1867 aa33.86■■■■□ 3.01
MKRN1-216ENST00000498535 A1BGP04217 495 aa33.86■■■■□ 3.01
MKRN1-216ENST00000498535 PPP2R1AP30153 589 aa33.86■■■■□ 3.01
MKRN1-216ENST00000498535 RASSF7Q02833 373 aa33.86■■■■□ 3.01
MKRN1-216ENST00000498535 CARMIL3Q8ND23 1372 aa33.85■■■■□ 3.01
MKRN1-216ENST00000498535 PDZRN3Q9UPQ7 1066 aa33.85■■■■□ 3.01
MKRN1-216ENST00000498535 KCNQ3O43525 872 aa33.84■■■■□ 3.01
MKRN1-216ENST00000498535 LMNB1P20700 586 aa33.84■■■■□ 3.01
MKRN1-216ENST00000498535 DLEC1Q9Y238 1755 aa33.84■■■■□ 3.01
MKRN1-216ENST00000498535 ZC3H4Q9UPT8 1303 aaKnown RBP33.83■■■■□ 3.01
MKRN1-216ENST00000498535 PDE6BP35913 854 aa33.83■■■■□ 3.01
MKRN1-216ENST00000498535 BRIP1Q9BX63 1249 aa33.83■■■■□ 3.01
MKRN1-216ENST00000498535 RRAGCQ9HB90 399 aa33.83■■■■□ 3.01
MKRN1-216ENST00000498535 NPHP1O15259 732 aa33.82■■■■□ 3
MKRN1-216ENST00000498535 SETDB2Q96T68 719 aa33.82■■■■□ 3
MKRN1-216ENST00000498535 SCN7AQ01118 1682 aa33.81■■■■□ 3
MKRN1-216ENST00000498535 ZNF622Q969S3 477 aaKnown RBP eCLIP33.81■■■■□ 3
MKRN1-216ENST00000498535 PRR5LQ6MZQ0 368 aa33.8■■■■□ 3
MKRN1-216ENST00000498535 MCM10Q7L590 875 aa33.8■■■■□ 3
MKRN1-216ENST00000498535 FSTL1Q12841 308 aa33.79■■■■□ 3
MKRN1-216ENST00000498535 DZIP3Q86Y13 1208 aaKnown RBP33.79■■■■□ 3
MKRN1-216ENST00000498535 CAMTA2O94983 1202 aa33.78■■■■□ 3
MKRN1-216ENST00000498535 USP16Q9Y5T5 823 aa33.78■■■■□ 3
MKRN1-216ENST00000498535 SNRPA1P09661 255 aaKnown RBP33.77■■■■□ 3
MKRN1-216ENST00000498535 CCDC24Q8N4L8 307 aa33.77■■■■□ 3
MKRN1-216ENST00000498535 CNBD1Q8NA66 436 aa33.77■■■■□ 3
MKRN1-216ENST00000498535 TNRC6CQ9HCJ0 1690 aaKnown RBP33.76■■■□□ 2.99
MKRN1-216ENST00000498535 HTATSF1O43719 755 aaKnown RBP33.75■■■□□ 2.99
MKRN1-216ENST00000498535 IFFO2Q5TF58 517 aa33.75■■■□□ 2.99
MKRN1-216ENST00000498535 ST5P78524 1137 aa33.74■■■□□ 2.99
MKRN1-216ENST00000498535 ANKRD31Q8N7Z5 1873 aa33.73■■■□□ 2.99
MKRN1-216ENST00000498535 GLTPD2A6NH11 291 aa33.73■■■□□ 2.99
MKRN1-216ENST00000498535 PIP4K2AP48426 406 aaPredicted RBP33.73■■■□□ 2.99
MKRN1-216ENST00000498535 PRELPP51888 382 aa33.73■■■□□ 2.99
MKRN1-216ENST00000498535 NFKBIEO00221 500 aa33.72■■■□□ 2.99
MKRN1-216ENST00000498535 C21orf2O43822 256 aa33.72■■■□□ 2.99
MKRN1-216ENST00000498535 NEFMP07197 916 aa33.72■■■□□ 2.99
MKRN1-216ENST00000498535 DCTN1Q14203 1278 aa33.72■■■□□ 2.99
MKRN1-216ENST00000498535 DNAJC5GQ8N7S2 189 aa33.72■■■□□ 2.99
MKRN1-216ENST00000498535 ZNF219Q9P2Y4 722 aaPredicted RBP33.72■■■□□ 2.99
MKRN1-216ENST00000498535 PRAMEF22A3QJZ6 481 aa33.71■■■□□ 2.99
MKRN1-216ENST00000498535 CLEC4GQ6UXB4 293 aa33.71■■■□□ 2.99
MKRN1-216ENST00000498535 ZNF652Q9Y2D9 606 aa33.71■■■□□ 2.99
MKRN1-216ENST00000498535 VEGFAP15692 232 aaPredicted RBP33.69■■■□□ 2.98
MKRN1-216ENST00000498535 SMC1BQ8NDV3 1235 aa33.69■■■□□ 2.98
MKRN1-216ENST00000498535 CNKSR1Q969H4 720 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms