RNA–Protein interactions for RNA: ENST00000497726.5

CCDC58-206, Transcript of coiled-coil domain containing 58, humanhuman

TSL 5 BASIC

Gene CCDC58, Length 438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-206ENST00000497726 TMEM88BA6NKF7 163 aa13.41□□□□□ -0.26
CCDC58-206ENST00000497726 LMNB1P20700 586 aa13.41□□□□□ -0.26
CCDC58-206ENST00000497726 NLGN1Q8N2Q7 840 aa13.4□□□□□ -0.26
CCDC58-206ENST00000497726 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
CCDC58-206ENST00000497726 WDR33Q9C0J8 1336 aaKnown RBP13.39□□□□□ -0.27
CCDC58-206ENST00000497726 TATP17735 454 aaPredicted RBP13.39□□□□□ -0.27
CCDC58-206ENST00000497726 MORC1Q86VD1 984 aa13.39□□□□□ -0.27
CCDC58-206ENST00000497726 KNSTRNQ9Y448 316 aa13.39□□□□□ -0.27
CCDC58-206ENST00000497726 PARP3Q9Y6F1 533 aa13.39□□□□□ -0.27
CCDC58-206ENST00000497726 DEFB115Q30KQ5 88 aa13.38□□□□□ -0.27
CCDC58-206ENST00000497726 DPY19L2Q6NUT2 758 aa13.38□□□□□ -0.27
CCDC58-206ENST00000497726 POLKQ9UBT6 870 aa13.38□□□□□ -0.27
CCDC58-206ENST00000497726 C4AP0C0L4 1744 aa13.38□□□□□ -0.27
CCDC58-206ENST00000497726 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
CCDC58-206ENST00000497726 RASSF10A6NK89 507 aa13.37□□□□□ -0.27
CCDC58-206ENST00000497726 SOX10P56693 466 aa13.37□□□□□ -0.27
CCDC58-206ENST00000497726 ITPK1Q13572 414 aa13.37□□□□□ -0.27
CCDC58-206ENST00000497726 SMARCC1Q92922 1105 aaPredicted RBP13.37□□□□□ -0.27
CCDC58-206ENST00000497726 LOC102724428A0A0B4J2F2 783 aa13.36□□□□□ -0.27
CCDC58-206ENST00000497726 GYS1P13807 737 aa13.36□□□□□ -0.27
CCDC58-206ENST00000497726 SIK1P57059 783 aa13.36□□□□□ -0.27
CCDC58-206ENST00000497726 CC2D1BQ5T0F9 858 aaKnown RBP13.36□□□□□ -0.27
CCDC58-206ENST00000497726 ITGBL1O95965 494 aaPredicted RBP13.35□□□□□ -0.27
CCDC58-206ENST00000497726 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
CCDC58-206ENST00000497726 DGKZQ13574 1117 aa13.35□□□□□ -0.27
CCDC58-206ENST00000497726 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
CCDC58-206ENST00000497726 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
CCDC58-206ENST00000497726 BEGAINQ9BUH8 593 aa13.35□□□□□ -0.27
CCDC58-206ENST00000497726 WASHC2AQ641Q2 1341 aa13.35□□□□□ -0.27
CCDC58-206ENST00000497726 PCDH11XQ9BZA7 1347 aa13.35□□□□□ -0.27
CCDC58-206ENST00000497726 PCDH11YQ9BZA8 1340 aa13.35□□□□□ -0.27
CCDC58-206ENST00000497726 TIAM2Q8IVF5 1701 aa13.34□□□□□ -0.27
CCDC58-206ENST00000497726 PIGBQ92521 554 aa13.34□□□□□ -0.27
CCDC58-206ENST00000497726 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
CCDC58-206ENST00000497726 EYA1Q99502 592 aa13.34□□□□□ -0.27
CCDC58-206ENST00000497726 ITGB4P16144 1822 aa13.34□□□□□ -0.27
CCDC58-206ENST00000497726 NFKBIEO00221 500 aa13.32□□□□□ -0.28
CCDC58-206ENST00000497726 DDNO94850 711 aaPredicted RBP13.32□□□□□ -0.28
CCDC58-206ENST00000497726 ATP6V1AP38606 617 aa13.32□□□□□ -0.28
CCDC58-206ENST00000497726 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
CCDC58-206ENST00000497726 LDHDQ86WU2 507 aa13.32□□□□□ -0.28
CCDC58-206ENST00000497726 RTCBQ9Y3I0 505 aaKnown RBP13.32□□□□□ -0.28
CCDC58-206ENST00000497726 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
CCDC58-206ENST00000497726 GRM1Q13255 1194 aa13.31□□□□□ -0.28
CCDC58-206ENST00000497726 ABT1Q9ULW3 272 aaKnown RBP13.31□□□□□ -0.28
CCDC58-206ENST00000497726 CCDC88AQ3V6T2 1871 aa13.31□□□□□ -0.28
CCDC58-206ENST00000497726 CYP27B1O15528 508 aa13.3□□□□□ -0.28
CCDC58-206ENST00000497726 DDR1Q08345 913 aa13.3□□□□□ -0.28
CCDC58-206ENST00000497726 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
CCDC58-206ENST00000497726 CASP8AP2Q9UKL3 1982 aa13.29□□□□□ -0.28
CCDC58-206ENST00000497726 RFC4P35249 363 aa13.29□□□□□ -0.28
CCDC58-206ENST00000497726 ERFEQ4G0M1 354 aa13.29□□□□□ -0.28
CCDC58-206ENST00000497726 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
CCDC58-206ENST00000497726 GPR101Q96P66 508 aaPredicted RBP13.29□□□□□ -0.28
CCDC58-206ENST00000497726 ASAP1Q9ULH1 1129 aa13.29□□□□□ -0.28
CCDC58-206ENST00000497726 SPG7Q9UQ90 795 aa13.29□□□□□ -0.28
CCDC58-206ENST00000497726 HABP4Q5JVS0 413 aaKnown RBP13.28□□□□□ -0.28
CCDC58-206ENST00000497726 PAXIP1Q6ZW49 1069 aaPredicted RBP13.28□□□□□ -0.28
CCDC58-206ENST00000497726 CAPNS2Q96L46 248 aa13.28□□□□□ -0.28
CCDC58-206ENST00000497726 DLL1O00548 723 aa13.27□□□□□ -0.29
CCDC58-206ENST00000497726 EAPPQ56P03 285 aaPredicted RBP13.27□□□□□ -0.29
CCDC58-206ENST00000497726 CYP4F22Q6NT55 531 aa13.27□□□□□ -0.29
CCDC58-206ENST00000497726 TAF1DQ9H5J8 278 aaPredicted RBP13.27□□□□□ -0.29
CCDC58-206ENST00000497726 MTHFSP49914 203 aa13.26□□□□□ -0.29
CCDC58-206ENST00000497726 FKBP8Q14318 412 aa13.26□□□□□ -0.29
CCDC58-206ENST00000497726 LTBP1Q14766 1721 aa13.26□□□□□ -0.29
CCDC58-206ENST00000497726 SRP68Q9UHB9 627 aaKnown RBP13.26□□□□□ -0.29
CCDC58-206ENST00000497726 CLEC11AQ9Y240 323 aa13.26□□□□□ -0.29
CCDC58-206ENST00000497726 PER1O15534 1290 aaPredicted RBP13.25□□□□□ -0.29
CCDC58-206ENST00000497726 AOC2O75106 756 aa13.25□□□□□ -0.29
CCDC58-206ENST00000497726 MAP1SQ66K74 1059 aaPredicted RBP13.25□□□□□ -0.29
CCDC58-206ENST00000497726 SULT6B1Q6IMI4 303 aa13.25□□□□□ -0.29
CCDC58-206ENST00000497726 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
CCDC58-206ENST00000497726 GCC1Q96CN9 775 aa13.25□□□□□ -0.29
CCDC58-206ENST00000497726 THSD7BQ9C0I4 1608 aa13.24□□□□□ -0.29
CCDC58-206ENST00000497726 HMOX1P09601 288 aa13.24□□□□□ -0.29
CCDC58-206ENST00000497726 PHKG2P15735 406 aa13.24□□□□□ -0.29
CCDC58-206ENST00000497726 CNTROBQ8N137 903 aa13.24□□□□□ -0.29
CCDC58-206ENST00000497726 TTLL6Q8N841 843 aa13.24□□□□□ -0.29
CCDC58-206ENST00000497726 IQCA1LA6NCM1 817 aa13.23□□□□□ -0.29
CCDC58-206ENST00000497726 POLRMTO00411 1230 aaKnown RBP13.23□□□□□ -0.29
CCDC58-206ENST00000497726 ECE1P42892 770 aa13.23□□□□□ -0.29
CCDC58-206ENST00000497726 IFNL2Q8IZJ0 200 aa13.23□□□□□ -0.29
CCDC58-206ENST00000497726 SLC4A9Q96Q91 983 aa13.23□□□□□ -0.29
CCDC58-206ENST00000497726 RPS6KA4O75676 772 aa13.22□□□□□ -0.29
CCDC58-206ENST00000497726 IL13P35225 146 aa13.22□□□□□ -0.29
CCDC58-206ENST00000497726 FMR1Q06787 632 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC58-206ENST00000497726 PLEKHO1Q53GL0 409 aaPredicted RBP13.22□□□□□ -0.29
CCDC58-206ENST00000497726 TMOD3Q9NYL9 352 aa13.22□□□□□ -0.29
CCDC58-206ENST00000497726 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.29
CCDC58-206ENST00000497726 ATG3Q9NT62 314 aa13.21□□□□□ -0.29
CCDC58-206ENST00000497726 COL3A1P02461 1466 aaPredicted RBP13.21□□□□□ -0.3
CCDC58-206ENST00000497726 SCN11AQ9UI33 1791 aa13.2□□□□□ -0.3
CCDC58-206ENST00000497726 DIAPH1O60610 1272 aaKnown RBP13.2□□□□□ -0.3
CCDC58-206ENST00000497726 FXR1P51114 621 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC58-206ENST00000497726 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
CCDC58-206ENST00000497726 RC3H1Q5TC82 1133 aaKnown RBP13.2□□□□□ -0.3
CCDC58-206ENST00000497726 DDX21Q9NR30 783 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC58-206ENST00000497726 CA12O43570 354 aa13.19□□□□□ -0.3
CCDC58-206ENST00000497726 TM4SF1P30408 202 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms