RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 TATP17735 454 aaPredicted RBP14.33□□□□□ -0.12
SNRNP200-208ENST00000497539 HDGFL1Q5TGJ6 251 aa14.33□□□□□ -0.12
SNRNP200-208ENST00000497539 SPG7Q9UQ90 795 aa14.33□□□□□ -0.12
SNRNP200-208ENST00000497539 RAPGEF4Q8WZA2 1011 aa14.32□□□□□ -0.12
SNRNP200-208ENST00000497539 MEIS3Q99687 375 aa14.32□□□□□ -0.12
SNRNP200-208ENST00000497539 UBR2Q8IWV8 1755 aa14.32□□□□□ -0.12
SNRNP200-208ENST00000497539 GNAI3P08754 354 aa14.32□□□□□ -0.12
SNRNP200-208ENST00000497539 PHKG2P15735 406 aa14.31□□□□□ -0.12
SNRNP200-208ENST00000497539 MPRIPQ6WCQ1 1025 aa14.31□□□□□ -0.12
SNRNP200-208ENST00000497539 TUBGCP6Q96RT7 1819 aa14.31□□□□□ -0.12
SNRNP200-208ENST00000497539 TBC1D32Q96NH3 1257 aa14.31□□□□□ -0.12
SNRNP200-208ENST00000497539 UPF2Q9HAU5 1272 aaKnown RBP14.31□□□□□ -0.12
SNRNP200-208ENST00000497539 PLCH1Q4KWH8 1693 aa14.31□□□□□ -0.12
SNRNP200-208ENST00000497539 WDR17Q8IZU2 1322 aa14.3□□□□□ -0.12
SNRNP200-208ENST00000497539 HMMRO75330 724 aa14.3□□□□□ -0.12
SNRNP200-208ENST00000497539 GIGYF1O75420 1035 aaPredicted RBP14.29□□□□□ -0.12
SNRNP200-208ENST00000497539 GNAI2P04899 355 aa14.29□□□□□ -0.12
SNRNP200-208ENST00000497539 FKBP5Q13451 457 aaPredicted RBP14.29□□□□□ -0.12
SNRNP200-208ENST00000497539 LNPKQ9C0E8 428 aa14.29□□□□□ -0.12
SNRNP200-208ENST00000497539 PDCL3Q9H2J4 239 aa14.29□□□□□ -0.12
SNRNP200-208ENST00000497539 HSP90AB1P08238 724 aaKnown RBP14.29□□□□□ -0.12
SNRNP200-208ENST00000497539 ANKRD45Q5TZF3 282 aa14.29□□□□□ -0.12
SNRNP200-208ENST00000497539 PANK2Q9BZ23 570 aa14.29□□□□□ -0.12
SNRNP200-208ENST00000497539 SLC52A2Q9HAB3 445 aa14.29□□□□□ -0.12
SNRNP200-208ENST00000497539 NLRP2Q9NX02 1062 aa14.29□□□□□ -0.12
SNRNP200-208ENST00000497539 COL14A1Q05707 1796 aaKnown RBP14.29□□□□□ -0.12
SNRNP200-208ENST00000497539 F6X3S4 739 aa14.28□□□□□ -0.12
SNRNP200-208ENST00000497539 IFNL2Q8IZJ0 200 aa14.28□□□□□ -0.12
SNRNP200-208ENST00000497539 KCNQ3O43525 872 aa14.28□□□□□ -0.12
SNRNP200-208ENST00000497539 XRCC6P12956 609 aaKnown RBP eCLIP14.28□□□□□ -0.12
SNRNP200-208ENST00000497539 DBF4Q9UBU7 674 aaPredicted RBP14.28□□□□□ -0.12
SNRNP200-208ENST00000497539 CABLES1Q8TDN4 633 aa14.28□□□□□ -0.12
SNRNP200-208ENST00000497539 DCAF5Q96JK2 942 aa14.28□□□□□ -0.12
SNRNP200-208ENST00000497539 ADCY9O60503 1353 aa14.27□□□□□ -0.12
SNRNP200-208ENST00000497539 MFAP1P55081 439 aaKnown RBP14.27□□□□□ -0.12
SNRNP200-208ENST00000497539 WNK3Q9BYP7 1800 aa14.27□□□□□ -0.13
SNRNP200-208ENST00000497539 LTBP4Q8N2S1 1624 aa14.27□□□□□ -0.13
SNRNP200-208ENST00000497539 NCLP19338 710 aaKnown RBP14.26□□□□□ -0.13
SNRNP200-208ENST00000497539 ATP8B2P98198 1209 aa14.26□□□□□ -0.13
SNRNP200-208ENST00000497539 CHPF2Q9P2E5 772 aa14.26□□□□□ -0.13
SNRNP200-208ENST00000497539 HSP90B1P14625 803 aaKnown RBP14.26□□□□□ -0.13
SNRNP200-208ENST00000497539 L1TD1Q5T7N2 865 aaKnown RBP14.26□□□□□ -0.13
SNRNP200-208ENST00000497539 PLEKHM2Q8IWE5 1019 aa14.26□□□□□ -0.13
SNRNP200-208ENST00000497539 SECISBP2LQ93073 1101 aaKnown RBP14.26□□□□□ -0.13
SNRNP200-208ENST00000497539 ROBO1Q9Y6N7 1651 aa14.25□□□□□ -0.13
SNRNP200-208ENST00000497539 SLC4A10Q6U841 1118 aa14.25□□□□□ -0.13
SNRNP200-208ENST00000497539 USP44Q9H0E7 712 aa14.25□□□□□ -0.13
SNRNP200-208ENST00000497539 NKX1-1Q15270 411 aaPredicted RBP14.25□□□□□ -0.13
SNRNP200-208ENST00000497539 BEND3Q5T5X7 828 aa14.25□□□□□ -0.13
SNRNP200-208ENST00000497539 OSBPL3Q9H4L5 887 aa14.25□□□□□ -0.13
SNRNP200-208ENST00000497539 PHAXQ9H814 394 aaKnown RBP14.25□□□□□ -0.13
SNRNP200-208ENST00000497539 HYPKQ9NX55 129 aa14.25□□□□□ -0.13
SNRNP200-208ENST00000497539 GOLGA6L3A6NEY3 463 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 ALDH1L1O75891 902 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 CSB-PGBD3P0DP91 1061 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 MCM4P33991 863 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 CHRNA2Q15822 529 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 ZNF790Q6PG37 636 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 DNAAF4Q8WXU2 420 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 CARD10Q9BWT7 1032 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 LRP6O75581 1613 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 COL16A1Q07092 1604 aaPredicted RBP14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 CYP27B1O15528 508 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 SRCIN1Q9C0H9 1055 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 PCDH11XQ9BZA7 1347 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 PCDH11YQ9BZA8 1340 aa14.24□□□□□ -0.13
SNRNP200-208ENST00000497539 FBXO3Q9UK99 471 aa14.23□□□□□ -0.13
SNRNP200-208ENST00000497539 RBM25P49756 843 aaKnown RBP14.23□□□□□ -0.13
SNRNP200-208ENST00000497539 POLA2Q14181 598 aa14.23□□□□□ -0.13
SNRNP200-208ENST00000497539 TTC22Q5TAA0 569 aa14.23□□□□□ -0.13
SNRNP200-208ENST00000497539 PRDM11Q9NQV5 511 aa14.23□□□□□ -0.13
SNRNP200-208ENST00000497539 DDX21Q9NR30 783 aaKnown RBP eCLIP14.23□□□□□ -0.139e-7■□□□□ 10.3
SNRNP200-208ENST00000497539 SALL3Q9BXA9 1300 aa14.23□□□□□ -0.13
SNRNP200-208ENST00000497539 TOGARAM1Q9Y4F4 1720 aa14.23□□□□□ -0.13
SNRNP200-208ENST00000497539 SSH3Q8TE77 659 aa14.22□□□□□ -0.13
SNRNP200-208ENST00000497539 C22orf23Q9BZE7 217 aa14.22□□□□□ -0.13
SNRNP200-208ENST00000497539 UTYO14607 1347 aa14.22□□□□□ -0.13
SNRNP200-208ENST00000497539 TNS2Q63HR2 1409 aa14.22□□□□□ -0.13
SNRNP200-208ENST00000497539 KCPQ6ZWJ8 1503 aa14.22□□□□□ -0.13
SNRNP200-208ENST00000497539 PDIA6Q15084 440 aa14.22□□□□□ -0.13
SNRNP200-208ENST00000497539 NECTIN2Q92692 538 aa14.22□□□□□ -0.13
SNRNP200-208ENST00000497539 MTX1Q13505 466 aa14.21□□□□□ -0.13
SNRNP200-208ENST00000497539 KSR2Q6VAB6 950 aa14.21□□□□□ -0.13
SNRNP200-208ENST00000497539 AOX1Q06278 1338 aa14.21□□□□□ -0.13
SNRNP200-208ENST00000497539 ERBB4Q15303 1308 aa14.21□□□□□ -0.13
SNRNP200-208ENST00000497539 UBTFL1P0CB47 393 aaPredicted RBP14.21□□□□□ -0.13
SNRNP200-208ENST00000497539 EIF2S2P20042 333 aaKnown RBP14.21□□□□□ -0.13
SNRNP200-208ENST00000497539 ARFGEF2Q9Y6D5 1785 aa14.21□□□□□ -0.14
SNRNP200-208ENST00000497539 TRAK2O60296 914 aa14.2□□□□□ -0.14
SNRNP200-208ENST00000497539 CDC45O75419 566 aa14.2□□□□□ -0.14
SNRNP200-208ENST00000497539 GSPT1P15170 499 aaKnown RBP14.2□□□□□ -0.14
SNRNP200-208ENST00000497539 DISP2A7MBM2 1401 aa14.2□□□□□ -0.14
SNRNP200-208ENST00000497539 NUP188Q5SRE5 1749 aa14.2□□□□□ -0.14
SNRNP200-208ENST00000497539 ERVV-2B6SEH9 535 aa14.2□□□□□ -0.14
SNRNP200-208ENST00000497539 HDAC5Q9UQL6 1122 aa14.2□□□□□ -0.14
SNRNP200-208ENST00000497539 LRRFIP2Q9Y608 721 aaKnown RBP14.19□□□□□ -0.14
SNRNP200-208ENST00000497539 COL15A1P39059 1388 aa14.19□□□□□ -0.14
SNRNP200-208ENST00000497539 PI4KAP2A4QPH2 592 aa14.19□□□□□ -0.14
SNRNP200-208ENST00000497539 LRP10Q7Z4F1 713 aa14.19□□□□□ -0.14
SNRNP200-208ENST00000497539 PI4KAP1Q8N8J0 262 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms