RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 MMP10P09238 476 aa24.7■■□□□ 1.54
RPN1-208ENST00000497415 SRP68Q9UHB9 627 aaKnown RBP24.69■■□□□ 1.54
RPN1-208ENST00000497415 COL15A1P39059 1388 aa24.68■■□□□ 1.54
RPN1-208ENST00000497415 WDR43Q15061 677 aaKnown RBP eCLIP24.68■■□□□ 1.54
RPN1-208ENST00000497415 TMPOP42166 694 aaKnown RBP24.67■■□□□ 1.54
RPN1-208ENST00000497415 ADAMTS8Q9UP79 889 aa24.67■■□□□ 1.54
RPN1-208ENST00000497415 KDM3BQ7LBC6 1761 aa24.67■■□□□ 1.54
RPN1-208ENST00000497415 CANXP27824 592 aaKnown RBP24.66■■□□□ 1.54
RPN1-208ENST00000497415 EIF5P55010 431 aaKnown RBP24.66■■□□□ 1.54
RPN1-208ENST00000497415 RIPK4P57078 832 aa24.66■■□□□ 1.54
RPN1-208ENST00000497415 PNISRQ8TF01 805 aaKnown RBP24.66■■□□□ 1.54
RPN1-208ENST00000497415 NARFQ9UHQ1 456 aa24.66■■□□□ 1.54
RPN1-208ENST00000497415 KIF13BQ9NQT8 1826 aa24.65■■□□□ 1.54
RPN1-208ENST00000497415 SNRPA1P09661 255 aaKnown RBP24.65■■□□□ 1.54
RPN1-208ENST00000497415 FKBP8Q14318 412 aa24.65■■□□□ 1.54
RPN1-208ENST00000497415 RUNDC1Q96C34 613 aa24.65■■□□□ 1.54
RPN1-208ENST00000497415 THUMPD2Q9BTF0 503 aaKnown RBP24.65■■□□□ 1.54
RPN1-208ENST00000497415 USP16Q9Y5T5 823 aa24.65■■□□□ 1.54
RPN1-208ENST00000497415 ZPR1O75312 459 aa24.64■■□□□ 1.54
RPN1-208ENST00000497415 USPL1Q5W0Q7 1092 aa24.64■■□□□ 1.54
RPN1-208ENST00000497415 MIS18AQ9NYP9 233 aa24.64■■□□□ 1.54
RPN1-208ENST00000497415 IL6STP40189 918 aaPredicted RBP24.63■■□□□ 1.53
RPN1-208ENST00000497415 CCDC146Q8IYE0 955 aa24.63■■□□□ 1.53
RPN1-208ENST00000497415 A0A087WZG4 1122 aa24.62■■□□□ 1.53
RPN1-208ENST00000497415 PRAMEF22A3QJZ6 481 aa24.62■■□□□ 1.53
RPN1-208ENST00000497415 A1BGP04217 495 aa24.62■■□□□ 1.53
RPN1-208ENST00000497415 TM4SF1P30408 202 aa24.62■■□□□ 1.53
RPN1-208ENST00000497415 PARP3Q9Y6F1 533 aa24.62■■□□□ 1.53
RPN1-208ENST00000497415 LMOD3Q0VAK6 560 aa24.61■■□□□ 1.53
RPN1-208ENST00000497415 GPR162Q16538 588 aa24.61■■□□□ 1.53
RPN1-208ENST00000497415 BCL2L12Q9HB09 334 aa24.61■■□□□ 1.53
RPN1-208ENST00000497415 C10orf71Q711Q0 1435 aa24.6■■□□□ 1.53
RPN1-208ENST00000497415 DDR1Q08345 913 aa24.59■■□□□ 1.53
RPN1-208ENST00000497415 RRP7AQ9Y3A4 280 aaKnown RBP24.59■■□□□ 1.53
RPN1-208ENST00000497415 CHD4Q14839 1912 aa24.59■■□□□ 1.53
RPN1-208ENST00000497415 KIAA1551Q9HCM1 1747 aa24.58■■□□□ 1.53
RPN1-208ENST00000497415 LAMB4A4D0S4 1761 aa24.58■■□□□ 1.53
RPN1-208ENST00000497415 EIF4A1P60842 406 aaKnown RBP24.58■■□□□ 1.53
RPN1-208ENST00000497415 POLRMTO00411 1230 aaKnown RBP24.57■■□□□ 1.52
RPN1-208ENST00000497415 YBX3P16989 372 aaKnown RBP eCLIP24.57■■□□□ 1.52
RPN1-208ENST00000497415 BABAM1Q9NWV8 329 aa24.57■■□□□ 1.52
RPN1-208ENST00000497415 GIGYF1O75420 1035 aaPredicted RBP24.56■■□□□ 1.52
RPN1-208ENST00000497415 TGFB2P61812 414 aa24.56■■□□□ 1.52
RPN1-208ENST00000497415 PELP1Q8IZL8 1130 aaKnown RBP24.56■■□□□ 1.52
RPN1-208ENST00000497415 TRIM35Q9UPQ4 493 aa24.56■■□□□ 1.52
RPN1-208ENST00000497415 SCN7AQ01118 1682 aa24.56■■□□□ 1.52
RPN1-208ENST00000497415 YY1P25490 414 aa24.55■■□□□ 1.52
RPN1-208ENST00000497415 NFIXQ14938 502 aa24.55■■□□□ 1.52
RPN1-208ENST00000497415 NEUROD2Q15784 382 aa24.55■■□□□ 1.52
RPN1-208ENST00000497415 CCDC184Q52MB2 194 aa24.55■■□□□ 1.52
RPN1-208ENST00000497415 AFDNP55196 1824 aaKnown RBP24.54■■□□□ 1.52
RPN1-208ENST00000497415 PXDNLA1KZ92 1463 aa24.54■■□□□ 1.52
RPN1-208ENST00000497415 TBC1D2BQ9UPU7 963 aa24.54■■□□□ 1.52
RPN1-208ENST00000497415 ZNF330Q9Y3S2 320 aaPredicted RBP24.54■■□□□ 1.52
RPN1-208ENST00000497415 NRXN2Q9P2S2 1712 aa24.54■■□□□ 1.52
RPN1-208ENST00000497415 N4BP2Q86UW6 1770 aaPredicted RBP24.53■■□□□ 1.52
RPN1-208ENST00000497415 NBPF26B4DH59 902 aa24.53■■□□□ 1.52
RPN1-208ENST00000497415 ANP32CO43423 234 aa24.53■■□□□ 1.52
RPN1-208ENST00000497415 GRIN3BO60391 1043 aa24.53■■□□□ 1.52
RPN1-208ENST00000497415 PIP4K2AP48426 406 aaPredicted RBP24.53■■□□□ 1.52
RPN1-208ENST00000497415 NBPF10Q6P3W6 841 aaKnown RBP24.53■■□□□ 1.52
RPN1-208ENST00000497415 NBPF15Q8N660 670 aa24.53■■□□□ 1.52
RPN1-208ENST00000497415 TSPYL4Q9UJ04 414 aa24.53■■□□□ 1.52
RPN1-208ENST00000497415 BCORQ6W2J9 1755 aa24.52■■□□□ 1.52
RPN1-208ENST00000497415 NPM2Q86SE8 214 aaKnown RBP24.52■■□□□ 1.52
RPN1-208ENST00000497415 CAMTA2O94983 1202 aa24.51■■□□□ 1.51
RPN1-208ENST00000497415 DZIP3Q86Y13 1208 aaKnown RBP24.51■■□□□ 1.51
RPN1-208ENST00000497415 UTRNP46939 3433 aa24.49■■□□□ 1.51
RPN1-208ENST00000497415 CHL1O00533 1208 aa24.49■■□□□ 1.51
RPN1-208ENST00000497415 SERPINB2P05120 415 aa24.49■■□□□ 1.51
RPN1-208ENST00000497415 TBC1D9BQ66K14 1250 aa24.49■■□□□ 1.51
RPN1-208ENST00000497415 BRCA1P38398 1863 aaKnown RBP24.49■■□□□ 1.51
RPN1-208ENST00000497415 A0A0G2JLW4 131 aa24.48■■□□□ 1.51
RPN1-208ENST00000497415 APAF1O14727 1248 aa24.48■■□□□ 1.51
RPN1-208ENST00000497415 DPEP1P16444 411 aa24.47■■□□□ 1.51
RPN1-208ENST00000497415 RGL2O15211 777 aa24.46■■□□□ 1.51
RPN1-208ENST00000497415 KCNA3P22001 575 aa24.46■■□□□ 1.51
RPN1-208ENST00000497415 CLEC4GQ6UXB4 293 aa24.46■■□□□ 1.51
RPN1-208ENST00000497415 BICDL1Q6ZP65 573 aa24.46■■□□□ 1.51
RPN1-208ENST00000497415 GOLGB1Q14789 3259 aaKnown RBP24.45■■□□□ 1.5
RPN1-208ENST00000497415 ERBB4Q15303 1308 aa24.44■■□□□ 1.5
RPN1-208ENST00000497415 WWC3Q9ULE0 1092 aa24.44■■□□□ 1.5
RPN1-208ENST00000497415 CFAP44Q96MT7 982 aa24.43■■□□□ 1.5
RPN1-208ENST00000497415 MRS2Q9HD23 443 aa24.43■■□□□ 1.5
RPN1-208ENST00000497415 CARMIL3Q8ND23 1372 aa24.42■■□□□ 1.5
RPN1-208ENST00000497415 SETDB2Q96T68 719 aa24.41■■□□□ 1.5
RPN1-208ENST00000497415 ZNF652Q9Y2D9 606 aa24.41■■□□□ 1.5
RPN1-208ENST00000497415 LAS1LQ9Y4W2 734 aaKnown RBP24.41■■□□□ 1.5
RPN1-208ENST00000497415 ZNF853P0CG23 659 aa24.4■■□□□ 1.5
RPN1-208ENST00000497415 PIM2Q9P1W9 311 aa24.4■■□□□ 1.5
RPN1-208ENST00000497415 ARFGEF1Q9Y6D6 1849 aa24.4■■□□□ 1.5
RPN1-208ENST00000497415 ANKRD31Q8N7Z5 1873 aa24.39■■□□□ 1.5
RPN1-208ENST00000497415 CHRNA5P30532 468 aa24.39■■□□□ 1.49
RPN1-208ENST00000497415 PDIA6Q15084 440 aa24.39■■□□□ 1.49
RPN1-208ENST00000497415 PRR5LQ6MZQ0 368 aa24.39■■□□□ 1.49
RPN1-208ENST00000497415 BCS1LQ9Y276 419 aa24.39■■□□□ 1.49
RPN1-208ENST00000497415 ERVV-1B6SEH8 477 aa24.38■■□□□ 1.49
RPN1-208ENST00000497415 MYL6BP14649 208 aa24.38■■□□□ 1.49
RPN1-208ENST00000497415 EIF2S2P20042 333 aaKnown RBP24.38■■□□□ 1.49
RPN1-208ENST00000497415 LRP10Q7Z4F1 713 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms