RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 KDM5BQ9UGL1 1544 aa8.73□□□□□ -1.01
ITGA6-211ENST00000497107 ANKRD30BQ9BXX2 1392 aa8.73□□□□□ -1.01
ITGA6-211ENST00000497107 MBD5Q9P267 1494 aa8.72□□□□□ -1.01
ITGA6-211ENST00000497107 CDC42BPBQ9Y5S2 1711 aa8.72□□□□□ -1.01
ITGA6-211ENST00000497107 ARHGAP5Q13017 1502 aa8.72□□□□□ -1.01
ITGA6-211ENST00000497107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.72□□□□□ -1.01
ITGA6-211ENST00000497107 ERVH48-1M5A8F1 160 aa8.72□□□□□ -1.01
ITGA6-211ENST00000497107 RASSF7Q02833 373 aa8.72□□□□□ -1.01
ITGA6-211ENST00000497107 PROSER2Q86WR7 435 aaPredicted RBP8.72□□□□□ -1.01
ITGA6-211ENST00000497107 TMEM151AQ8N4L1 468 aa8.72□□□□□ -1.01
ITGA6-211ENST00000497107 CEP126Q9P2H0 1117 aa8.72□□□□□ -1.01
ITGA6-211ENST00000497107 ZCCHC11Q5TAX3 1644 aaKnown RBP8.72□□□□□ -1.01
ITGA6-211ENST00000497107 SAMD9LQ8IVG5 1584 aa8.71□□□□□ -1.02
ITGA6-211ENST00000497107 EFCAB2Q5VUJ9 269 aa8.71□□□□□ -1.02
ITGA6-211ENST00000497107 CLUAP1Q96AJ1 413 aa8.71□□□□□ -1.02
ITGA6-211ENST00000497107 KIAA1107Q9UPP5 1409 aa8.71□□□□□ -1.02
ITGA6-211ENST00000497107 PZPP20742 1482 aa8.7□□□□□ -1.02
ITGA6-211ENST00000497107 UPP2O95045 317 aa8.7□□□□□ -1.02
ITGA6-211ENST00000497107 GDF11O95390 407 aa8.7□□□□□ -1.02
ITGA6-211ENST00000497107 SCARF1Q14162 830 aa8.7□□□□□ -1.02
ITGA6-211ENST00000497107 SLFNL1Q499Z3 407 aa8.7□□□□□ -1.02
ITGA6-211ENST00000497107 MEIOBQ8N635 442 aa8.7□□□□□ -1.02
ITGA6-211ENST00000497107 MYO5CQ9NQX4 1742 aa8.7□□□□□ -1.02
ITGA6-211ENST00000497107 KIF15Q9NS87 1388 aa8.7□□□□□ -1.02
ITGA6-211ENST00000497107 PLCH2O75038 1416 aa8.7□□□□□ -1.02
ITGA6-211ENST00000497107 RPRD2Q5VT52 1461 aaKnown RBP8.7□□□□□ -1.02
ITGA6-211ENST00000497107 TTC37Q6PGP7 1564 aa8.69□□□□□ -1.02
ITGA6-211ENST00000497107 Q6ZVU0 165 aa8.69□□□□□ -1.02
ITGA6-211ENST00000497107 ZNF784Q8NCA9 323 aaPredicted RBP8.69□□□□□ -1.02
ITGA6-211ENST00000497107 L3MBTL2Q969R5 705 aa8.69□□□□□ -1.02
ITGA6-211ENST00000497107 NUP155O75694 1391 aa8.69□□□□□ -1.02
ITGA6-211ENST00000497107 MAST1Q9Y2H9 1570 aa8.69□□□□□ -1.02
ITGA6-211ENST00000497107 DDX10Q13206 875 aaKnown RBP8.68□□□□□ -1.02
ITGA6-211ENST00000497107 TSEN34Q9BSV6 310 aaKnown RBP8.68□□□□□ -1.02
ITGA6-211ENST00000497107 TMPRSS4Q9NRS4 437 aa8.68□□□□□ -1.02
ITGA6-211ENST00000497107 PCDHB11Q9Y5F2 797 aa8.68□□□□□ -1.02
ITGA6-211ENST00000497107 PPFIA3O75145 1194 aa8.67□□□□□ -1.02
ITGA6-211ENST00000497107 RNF135Q8IUD6 432 aa8.67□□□□□ -1.02
ITGA6-211ENST00000497107 FNBP4Q8N3X1 1017 aaPredicted RBP8.67□□□□□ -1.02
ITGA6-211ENST00000497107 YTHDC1Q96MU7 727 aaKnown RBP8.67□□□□□ -1.02
ITGA6-211ENST00000497107 SYCP2Q9BX26 1530 aa8.67□□□□□ -1.02
ITGA6-211ENST00000497107 KDM5DQ9BY66 1539 aa8.67□□□□□ -1.02
ITGA6-211ENST00000497107 ALG2Q9H553 416 aa8.67□□□□□ -1.02
ITGA6-211ENST00000497107 LILRA1O75019 489 aa8.66□□□□□ -1.02
ITGA6-211ENST00000497107 ERVK-9P63128 1117 aa8.66□□□□□ -1.02
ITGA6-211ENST00000497107 KRT76Q01546 638 aa8.66□□□□□ -1.02
ITGA6-211ENST00000497107 CC2D2BQ6DHV5 1058 aa8.66□□□□□ -1.02
ITGA6-211ENST00000497107 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
ITGA6-211ENST00000497107 PHTF2Q8N3S3 785 aa8.66□□□□□ -1.02
ITGA6-211ENST00000497107 ESF1Q9H501 851 aaKnown RBP8.66□□□□□ -1.02
ITGA6-211ENST00000497107 ARAP3Q8WWN8 1544 aa8.65□□□□□ -1.02
ITGA6-211ENST00000497107 CBLBQ13191 982 aa8.65□□□□□ -1.02
ITGA6-211ENST00000497107 HIRIP3Q9BW71 556 aaPredicted RBP8.65□□□□□ -1.02
ITGA6-211ENST00000497107 CYLDQ9NQC7 956 aa8.65□□□□□ -1.02
ITGA6-211ENST00000497107 ADAMTS8Q9UP79 889 aa8.65□□□□□ -1.02
ITGA6-211ENST00000497107 WDR7Q9Y4E6 1490 aa8.64□□□□□ -1.03
ITGA6-211ENST00000497107 POM121CA8CG34 1229 aa8.64□□□□□ -1.03
ITGA6-211ENST00000497107 ADH1AP07327 375 aa8.64□□□□□ -1.03
ITGA6-211ENST00000497107 HSPA5P11021 654 aaKnown RBP8.64□□□□□ -1.03
ITGA6-211ENST00000497107 BMP2P12643 396 aa8.64□□□□□ -1.03
ITGA6-211ENST00000497107 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
ITGA6-211ENST00000497107 DOLKQ9UPQ8 538 aa8.64□□□□□ -1.03
ITGA6-211ENST00000497107 PLXNC1O60486 1568 aa8.64□□□□□ -1.03
ITGA6-211ENST00000497107 TEX14Q8IWB6 1497 aa8.64□□□□□ -1.03
ITGA6-211ENST00000497107 RNF225M0QZC1 329 aaPredicted RBP8.63□□□□□ -1.03
ITGA6-211ENST00000497107 MYCP01106 439 aaPredicted RBP8.63□□□□□ -1.03
ITGA6-211ENST00000497107 NFATC2IPQ8NCF5 419 aa8.63□□□□□ -1.03
ITGA6-211ENST00000497107 SIRT1Q96EB6 747 aa8.63□□□□□ -1.03
ITGA6-211ENST00000497107 CCDC85AQ96PX6 553 aaPredicted RBP8.63□□□□□ -1.03
ITGA6-211ENST00000497107 DUOX2Q9NRD8 1548 aa8.63□□□□□ -1.03
ITGA6-211ENST00000497107 ANP32CO43423 234 aa8.62□□□□□ -1.03
ITGA6-211ENST00000497107 NBPF8Q3BBV2 869 aa8.62□□□□□ -1.03
ITGA6-211ENST00000497107 C6orf118Q5T5N4 469 aa8.62□□□□□ -1.03
ITGA6-211ENST00000497107 CYP2U1Q7Z449 544 aa8.62□□□□□ -1.03
ITGA6-211ENST00000497107 ABCC1P33527 1531 aa8.62□□□□□ -1.03
ITGA6-211ENST00000497107 ARHGEF12Q9NZN5 1544 aa8.62□□□□□ -1.03
ITGA6-211ENST00000497107 RTEL1-TNFRSF6BF6WH68 1400 aa8.62□□□□□ -1.03
ITGA6-211ENST00000497107 SPAG9O60271 1321 aaKnown RBP8.61□□□□□ -1.03
ITGA6-211ENST00000497107 MAN1A2O60476 641 aa8.61□□□□□ -1.03
ITGA6-211ENST00000497107 USP4Q13107 963 aa8.61□□□□□ -1.03
ITGA6-211ENST00000497107 HDGFL1Q5TGJ6 251 aa8.61□□□□□ -1.03
ITGA6-211ENST00000497107 GPR161Q8N6U8 529 aaKnown RBP8.61□□□□□ -1.03
ITGA6-211ENST00000497107 PLPP7Q8NBV4 271 aa8.61□□□□□ -1.03
ITGA6-211ENST00000497107 ERBINQ96RT1 1412 aa8.61□□□□□ -1.03
ITGA6-211ENST00000497107 UNC13BO14795 1591 aa8.61□□□□□ -1.03
ITGA6-211ENST00000497107 FAM135AQ9P2D6 1515 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 ATP5J2-PTCD1G3V325 749 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 CCER2I3L3R5 266 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 SPINT1O43278 529 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 TRAK2O60296 914 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 LZTS3O60299 673 aaPredicted RBP8.6□□□□□ -1.03
ITGA6-211ENST00000497107 ADD1P35611 737 aaKnown RBP8.6□□□□□ -1.03
ITGA6-211ENST00000497107 PTGIRP43119 386 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 RELBQ01201 579 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 ADAMTS19Q8TE59 1207 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 GLMNQ92990 594 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 ABCA9Q8IUA7 1624 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 ASXL2Q76L83 1435 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 TRAPPC8Q9Y2L5 1435 aa8.6□□□□□ -1.03
ITGA6-211ENST00000497107 SCTRP47872 440 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms