RNA–Protein interactions for RNA: ENST00000496925.5

PSMD2-220, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-220	ENST00000496925	TBC1D2B	Q9UPU7	963 aa		13.76	□□□□□ -0.21
PSMD2-220	ENST00000496925	GOLGB1	Q14789	3259 aa	Known RBP	13.76	□□□□□ -0.21
PSMD2-220	ENST00000496925	PLEKHG2	Q9H7P9	1386 aa		13.75	□□□□□ -0.21
PSMD2-220	ENST00000496925	KCNQ3	O43525	872 aa		13.75	□□□□□ -0.21
PSMD2-220	ENST00000496925	HTRA3	P83110	453 aa		13.75	□□□□□ -0.21
PSMD2-220	ENST00000496925	C2CD5	Q86YS7	1000 aa		13.75	□□□□□ -0.21
PSMD2-220	ENST00000496925	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD2-220	ENST00000496925	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD2-220	ENST00000496925	GNAT3	A8MTJ3	354 aa		13.74	□□□□□ -0.21
PSMD2-220	ENST00000496925	A1BG	P04217	495 aa		13.74	□□□□□ -0.21
PSMD2-220	ENST00000496925	PIP4K2A	P48426	406 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD2-220	ENST00000496925	ZNF496	Q96IT1	587 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD2-220	ENST00000496925	PHACTR3	Q96KR7	559 aa		13.74	□□□□□ -0.21
PSMD2-220	ENST00000496925	TOMM70	O94826	608 aa		13.73	□□□□□ -0.21
PSMD2-220	ENST00000496925	STARD3NL	O95772	234 aa		13.73	□□□□□ -0.21
PSMD2-220	ENST00000496925	TBC1D9B	Q66K14	1250 aa		13.73	□□□□□ -0.21
PSMD2-220	ENST00000496925	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
PSMD2-220	ENST00000496925	COL15A1	P39059	1388 aa		13.72	□□□□□ -0.21
PSMD2-220	ENST00000496925	PRKAR2B	P31323	418 aa		13.72	□□□□□ -0.21
PSMD2-220	ENST00000496925	MYH14	Q7Z406	1995 aa	Known RBP	13.72	□□□□□ -0.21
PSMD2-220	ENST00000496925	C4A	P0C0L4	1744 aa		13.72	□□□□□ -0.21
PSMD2-220	ENST00000496925	BTBD11	A6QL63	1104 aa		13.71	□□□□□ -0.21
PSMD2-220	ENST00000496925	NPHP1	O15259	732 aa		13.71	□□□□□ -0.21
PSMD2-220	ENST00000496925	ZNF790	Q6PG37	636 aa		13.71	□□□□□ -0.21
PSMD2-220	ENST00000496925	GAS2L2	Q8NHY3	880 aa		13.71	□□□□□ -0.21
PSMD2-220	ENST00000496925	KCP	Q6ZWJ8	1503 aa		13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925	PRAMEF22	A3QJZ6	481 aa		13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925		H0YIN7	160 aa		13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925	APLP1	P51693	650 aa		13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925	EIF5	P55010	431 aa	Known RBP	13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925	DCTN1	Q14203	1278 aa		13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925	NPM2	Q86SE8	214 aa	Known RBP	13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925	VSIG10	Q8N0Z9	540 aa		13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925	TTLL6	Q8N841	843 aa		13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925	CFAP53	Q96M91	514 aa		13.7	□□□□□ -0.22
PSMD2-220	ENST00000496925		A0A087WZG4	1122 aa		13.69	□□□□□ -0.22
PSMD2-220	ENST00000496925	PRELP	P51888	382 aa		13.69	□□□□□ -0.22
PSMD2-220	ENST00000496925	IFFO2	Q5TF58	517 aa		13.69	□□□□□ -0.22
PSMD2-220	ENST00000496925	MCM10	Q7L590	875 aa		13.69	□□□□□ -0.22
PSMD2-220	ENST00000496925	FMNL2	Q96PY5	1086 aa		13.69	□□□□□ -0.22
PSMD2-220	ENST00000496925	USP16	Q9Y5T5	823 aa		13.69	□□□□□ -0.22
PSMD2-220	ENST00000496925	KDM2B	Q8NHM5	1336 aa		13.68	□□□□□ -0.22
PSMD2-220	ENST00000496925	FAM177B	A6PVY3	158 aa		13.68	□□□□□ -0.22
PSMD2-220	ENST00000496925	C21orf2	O43822	256 aa		13.68	□□□□□ -0.22
PSMD2-220	ENST00000496925	MIS18A	Q9NYP9	233 aa		13.68	□□□□□ -0.22
PSMD2-220	ENST00000496925	CARMIL3	Q8ND23	1372 aa		13.68	□□□□□ -0.22
PSMD2-220	ENST00000496925	COL5A3	P25940	1745 aa	Predicted RBP	13.67	□□□□□ -0.22
PSMD2-220	ENST00000496925	TJP1	Q07157	1748 aa		13.67	□□□□□ -0.22
PSMD2-220	ENST00000496925	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.67	□□□□□ -0.22
PSMD2-220	ENST00000496925	NUDC	Q9Y266	331 aa		13.67	□□□□□ -0.22
PSMD2-220	ENST00000496925	HEG1	Q9ULI3	1381 aa		13.67	□□□□□ -0.22
PSMD2-220	ENST00000496925	PPP2R1A	P30153	589 aa		13.66	□□□□□ -0.22
PSMD2-220	ENST00000496925	NGEF	Q8N5V2	710 aa		13.66	□□□□□ -0.22
PSMD2-220	ENST00000496925	RBM46	Q8TBY0	533 aa	Known RBP	13.66	□□□□□ -0.22
PSMD2-220	ENST00000496925	RTF1	Q92541	710 aa	Known RBP	13.66	□□□□□ -0.22
PSMD2-220	ENST00000496925	SETDB2	Q96T68	719 aa		13.66	□□□□□ -0.22
PSMD2-220	ENST00000496925	RSPH6A	Q9H0K4	717 aa		13.66	□□□□□ -0.22
PSMD2-220	ENST00000496925	KIAA1551	Q9HCM1	1747 aa		13.66	□□□□□ -0.22
PSMD2-220	ENST00000496925	LMNB1	P20700	586 aa		13.65	□□□□□ -0.22
PSMD2-220	ENST00000496925	PRR5L	Q6MZQ0	368 aa		13.65	□□□□□ -0.22
PSMD2-220	ENST00000496925	DZIP3	Q86Y13	1208 aa	Known RBP	13.65	□□□□□ -0.22
PSMD2-220	ENST00000496925	DNAJC5G	Q8N7S2	189 aa		13.65	□□□□□ -0.22
PSMD2-220	ENST00000496925	SCN11A	Q9UI33	1791 aa		13.64	□□□□□ -0.23
PSMD2-220	ENST00000496925	ZNF831	Q5JPB2	1677 aa		13.64	□□□□□ -0.23
PSMD2-220	ENST00000496925	CAMTA2	O94983	1202 aa		13.64	□□□□□ -0.23
PSMD2-220	ENST00000496925	PDE6B	P35913	854 aa		13.64	□□□□□ -0.23
PSMD2-220	ENST00000496925	IL6ST	P40189	918 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD2-220	ENST00000496925	KIF13B	Q9NQT8	1826 aa		13.63	□□□□□ -0.23
PSMD2-220	ENST00000496925	NFKBIE	O00221	500 aa		13.63	□□□□□ -0.23
PSMD2-220	ENST00000496925	BRIP1	Q9BX63	1249 aa		13.63	□□□□□ -0.23
PSMD2-220	ENST00000496925	COL3A1	P02461	1466 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD2-220	ENST00000496925	MRC1	P22897	1456 aa		13.62	□□□□□ -0.23
PSMD2-220	ENST00000496925	GLTPD2	A6NH11	291 aa		13.62	□□□□□ -0.23
PSMD2-220	ENST00000496925	CNBD1	Q8NA66	436 aa		13.62	□□□□□ -0.23
PSMD2-220	ENST00000496925	SNRPA1	P09661	255 aa	Known RBP	13.61	□□□□□ -0.23
PSMD2-220	ENST00000496925	VEGFA	P15692	232 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD2-220	ENST00000496925	ST5	P78524	1137 aa		13.61	□□□□□ -0.23
PSMD2-220	ENST00000496925	FSTL1	Q12841	308 aa		13.61	□□□□□ -0.23
PSMD2-220	ENST00000496925	ERFE	Q4G0M1	354 aa		13.61	□□□□□ -0.23
PSMD2-220	ENST00000496925	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD2-220	ENST00000496925	NPC1L1	Q9UHC9	1359 aa		13.6	□□□□□ -0.23
PSMD2-220	ENST00000496925	DPY19L2	Q6NUT2	758 aa		13.6	□□□□□ -0.23
PSMD2-220	ENST00000496925	SMC1B	Q8NDV3	1235 aa		13.6	□□□□□ -0.23
PSMD2-220	ENST00000496925	NBPF26	B4DH59	902 aa		13.59	□□□□□ -0.23
PSMD2-220	ENST00000496925	TAF7	Q15545	349 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD2-220	ENST00000496925	HLF	Q16534	295 aa		13.59	□□□□□ -0.23
PSMD2-220	ENST00000496925	NBPF10	Q6P3W6	841 aa	Known RBP	13.59	□□□□□ -0.23
PSMD2-220	ENST00000496925	OLFM4	Q6UX06	510 aa		13.59	□□□□□ -0.23
PSMD2-220	ENST00000496925	NBPF15	Q8N660	670 aa		13.59	□□□□□ -0.23
PSMD2-220	ENST00000496925	THUMPD2	Q9BTF0	503 aa	Known RBP	13.59	□□□□□ -0.23
PSMD2-220	ENST00000496925	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PSMD2-220	ENST00000496925	RRP7A	Q9Y3A4	280 aa	Known RBP	13.59	□□□□□ -0.23
PSMD2-220	ENST00000496925	ADAMTS7	Q9UKP4	1686 aa		13.59	□□□□□ -0.23
PSMD2-220	ENST00000496925	CEMIP	Q8WUJ3	1361 aa		13.58	□□□□□ -0.23
PSMD2-220	ENST00000496925	POTEC	B2RU33	542 aa		13.58	□□□□□ -0.24
PSMD2-220	ENST00000496925	DDN	O94850	711 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD2-220	ENST00000496925	GTF2E1	P29083	439 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD2-220	ENST00000496925	PRPF40B	Q6NWY9	871 aa	Known RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms