RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 OVOS2A0A0G2JMS6 1433 aa18.5■□□□□ 0.55
CHPF2-204ENST00000495645 GNAI2P04899 355 aa18.5■□□□□ 0.55
CHPF2-204ENST00000495645 BEND3Q5T5X7 828 aa18.5■□□□□ 0.55
CHPF2-204ENST00000495645 HEG1Q9ULI3 1381 aa18.5■□□□□ 0.55
CHPF2-204ENST00000495645 ROBO1Q9Y6N7 1651 aa18.5■□□□□ 0.55
CHPF2-204ENST00000495645 KAT6BQ8WYB5 2073 aa18.5■□□□□ 0.55
CHPF2-204ENST00000495645 SRCIN1Q9C0H9 1055 aa18.5■□□□□ 0.55
CHPF2-204ENST00000495645 MFAP1P55081 439 aaKnown RBP18.49■□□□□ 0.55
CHPF2-204ENST00000495645 COPS6Q7L5N1 327 aa18.49■□□□□ 0.55
CHPF2-204ENST00000495645 GCC1Q96CN9 775 aa18.49■□□□□ 0.55
CHPF2-204ENST00000495645 XAGE3Q8WTP9 111 aa18.49■□□□□ 0.55
CHPF2-204ENST00000495645 KDM3BQ7LBC6 1761 aa18.48■□□□□ 0.55
CHPF2-204ENST00000495645 FRAT2O75474 233 aaPredicted RBP18.48■□□□□ 0.55
CHPF2-204ENST00000495645 UBTFL1P0CB47 393 aaPredicted RBP18.48■□□□□ 0.55
CHPF2-204ENST00000495645 RPAP2Q8IXW5 612 aaPredicted RBP18.48■□□□□ 0.55
CHPF2-204ENST00000495645 SYTL4Q96C24 671 aaPredicted RBP18.48■□□□□ 0.55
CHPF2-204ENST00000495645 CHMP4BQ9H444 224 aaKnown RBP18.48■□□□□ 0.55
CHPF2-204ENST00000495645 ZNF330Q9Y3S2 320 aaPredicted RBP18.47■□□□□ 0.55
CHPF2-204ENST00000495645 A1BGP04217 495 aa18.47■□□□□ 0.55
CHPF2-204ENST00000495645 ASAP1Q9ULH1 1129 aa18.47■□□□□ 0.55
CHPF2-204ENST00000495645 PCDH11XQ9BZA7 1347 aa18.46■□□□□ 0.55
CHPF2-204ENST00000495645 PCDH11YQ9BZA8 1340 aa18.46■□□□□ 0.55
CHPF2-204ENST00000495645 GSPT1P15170 499 aaKnown RBP18.46■□□□□ 0.55
CHPF2-204ENST00000495645 IL1RAPL2Q9NP60 686 aa18.46■□□□□ 0.55
CHPF2-204ENST00000495645 BRPF3Q9ULD4 1205 aa18.46■□□□□ 0.55
CHPF2-204ENST00000495645 VIRMAQ69YN4 1812 aaKnown RBP18.46■□□□□ 0.55
CHPF2-204ENST00000495645 HOXB7P09629 217 aa18.46■□□□□ 0.55
CHPF2-204ENST00000495645 PLEKHM2Q8IWE5 1019 aa18.46■□□□□ 0.55
CHPF2-204ENST00000495645 GOLGB1Q14789 3259 aaKnown RBP18.45■□□□□ 0.54
CHPF2-204ENST00000495645 ATP5J2-PTCD1G3V325 749 aa18.45■□□□□ 0.54
CHPF2-204ENST00000495645 PPP1R42Q7Z4L9 355 aa18.45■□□□□ 0.54
CHPF2-204ENST00000495645 DDX21Q9NR30 783 aaKnown RBP eCLIP18.45■□□□□ 0.54
CHPF2-204ENST00000495645 NHSL1Q5SYE7 1610 aa18.45■□□□□ 0.54
CHPF2-204ENST00000495645 AHDC1Q5TGY3 1603 aaPredicted RBP18.45■□□□□ 0.54
CHPF2-204ENST00000495645 UBAP1LF5GYI3 381 aa18.44■□□□□ 0.54
CHPF2-204ENST00000495645 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
CHPF2-204ENST00000495645 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
CHPF2-204ENST00000495645 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
CHPF2-204ENST00000495645 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
CHPF2-204ENST00000495645 FMNL2Q96PY5 1086 aa18.44■□□□□ 0.54
CHPF2-204ENST00000495645 IGKV5-2P06315 115 aa18.43■□□□□ 0.54
CHPF2-204ENST00000495645 SNRPA1P09661 255 aaKnown RBP18.43■□□□□ 0.54
CHPF2-204ENST00000495645 KSR2Q6VAB6 950 aa18.43■□□□□ 0.54
CHPF2-204ENST00000495645 RIC3Q7Z5B4 369 aa18.43■□□□□ 0.54
CHPF2-204ENST00000495645 TOM1O60784 492 aa18.43■□□□□ 0.54
CHPF2-204ENST00000495645 GNAI3P08754 354 aa18.43■□□□□ 0.54
CHPF2-204ENST00000495645 CCDC9Q9Y3X0 531 aaKnown RBP18.43■□□□□ 0.54
CHPF2-204ENST00000495645 ABCA3Q99758 1704 aa18.43■□□□□ 0.54
CHPF2-204ENST00000495645 SRGAP3O43295 1099 aa18.43■□□□□ 0.54
CHPF2-204ENST00000495645 LRP10Q7Z4F1 713 aa18.43■□□□□ 0.54
CHPF2-204ENST00000495645 PA2G4Q9UQ80 394 aaKnown RBP18.43■□□□□ 0.54
CHPF2-204ENST00000495645 PIGBQ92521 554 aa18.42■□□□□ 0.54
CHPF2-204ENST00000495645 C9orf78Q9NZ63 289 aaPredicted RBP18.42■□□□□ 0.54
CHPF2-204ENST00000495645 TTLL7Q6ZT98 887 aa18.42■□□□□ 0.54
CHPF2-204ENST00000495645 KLHDC4Q8TBB5 520 aa18.42■□□□□ 0.54
CHPF2-204ENST00000495645 MYD88Q99836 296 aa18.42■□□□□ 0.54
CHPF2-204ENST00000495645 SLKQ9H2G2 1235 aaPredicted RBP18.42■□□□□ 0.54
CHPF2-204ENST00000495645 ATP8B2P98198 1209 aa18.41■□□□□ 0.54
CHPF2-204ENST00000495645 ARXQ96QS3 562 aa18.41■□□□□ 0.54
CHPF2-204ENST00000495645 HYPKQ9NX55 129 aa18.41■□□□□ 0.54
CHPF2-204ENST00000495645 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.41■□□□□ 0.54
CHPF2-204ENST00000495645 SOS1Q07889 1333 aaPredicted RBP18.41■□□□□ 0.54
CHPF2-204ENST00000495645 HSP90AB1P08238 724 aaKnown RBP18.4■□□□□ 0.54
CHPF2-204ENST00000495645 ACSBG1Q96GR2 724 aa18.4■□□□□ 0.54
CHPF2-204ENST00000495645 SCN11AQ9UI33 1791 aa18.4■□□□□ 0.54
CHPF2-204ENST00000495645 SURF6O75683 361 aaKnown RBP18.4■□□□□ 0.54
CHPF2-204ENST00000495645 GSE1Q14687 1217 aa18.4■□□□□ 0.54
CHPF2-204ENST00000495645 KAZALD1Q96I82 304 aa18.4■□□□□ 0.54
CHPF2-204ENST00000495645 RBM42Q9BTD8 480 aaKnown RBP18.4■□□□□ 0.54
CHPF2-204ENST00000495645 SIPA1L3O60292 1781 aaPredicted RBP18.39■□□□□ 0.53
CHPF2-204ENST00000495645 C5P01031 1676 aa18.39■□□□□ 0.53
CHPF2-204ENST00000495645 NUTM1Q86Y26 1132 aa18.39■□□□□ 0.53
CHPF2-204ENST00000495645 ZBTB3Q9H5J0 574 aa18.39■□□□□ 0.53
CHPF2-204ENST00000495645 EPHA10Q5JZY3 1008 aa18.38■□□□□ 0.53
CHPF2-204ENST00000495645 SPRYD3Q8NCJ5 442 aa18.38■□□□□ 0.53
CHPF2-204ENST00000495645 SUCLG2Q96I99 432 aa18.38■□□□□ 0.53
CHPF2-204ENST00000495645 TMOD3Q9NYL9 352 aa18.38■□□□□ 0.53
CHPF2-204ENST00000495645 HMMRO75330 724 aa18.38■□□□□ 0.53
CHPF2-204ENST00000495645 TBC1D9Q6ZT07 1266 aa18.38■□□□□ 0.53
CHPF2-204ENST00000495645 ANKRD13DQ6ZTN6 518 aa18.38■□□□□ 0.53
CHPF2-204ENST00000495645 ADAMTS7Q9UKP4 1686 aa18.37■□□□□ 0.53
CHPF2-204ENST00000495645 MAP4K4O95819 1239 aaPredicted RBP18.37■□□□□ 0.53
CHPF2-204ENST00000495645 DNAJC10Q8IXB1 793 aa18.37■□□□□ 0.53
CHPF2-204ENST00000495645 C8orf37Q96NL8 207 aa18.37■□□□□ 0.53
CHPF2-204ENST00000495645 NKX1-1Q15270 411 aaPredicted RBP18.36■□□□□ 0.53
CHPF2-204ENST00000495645 BMP2KLQ5H9B9 411 aa18.36■□□□□ 0.53
CHPF2-204ENST00000495645 FAM182BQ5T319 152 aa18.36■□□□□ 0.53
CHPF2-204ENST00000495645 ERVV-2B6SEH9 535 aa18.36■□□□□ 0.53
CHPF2-204ENST00000495645 PRIM1P49642 420 aaKnown RBP18.36■□□□□ 0.53
CHPF2-204ENST00000495645 SLC4A9Q96Q91 983 aa18.36■□□□□ 0.53
CHPF2-204ENST00000495645 SIL1Q9H173 461 aa18.36■□□□□ 0.53
CHPF2-204ENST00000495645 BICC1Q9H694 974 aaKnown RBP18.36■□□□□ 0.53
CHPF2-204ENST00000495645 ILDR1Q86SU0 546 aaPredicted RBP18.36■□□□□ 0.53
CHPF2-204ENST00000495645 PKD1L3Q7Z443 1732 aa18.35■□□□□ 0.53
CHPF2-204ENST00000495645 COL16A1Q07092 1604 aaPredicted RBP18.35■□□□□ 0.53
CHPF2-204ENST00000495645 EXOC5O00471 708 aa18.35■□□□□ 0.53
CHPF2-204ENST00000495645 ATG3Q9NT62 314 aa18.35■□□□□ 0.53
CHPF2-204ENST00000495645 SDSP20132 328 aa18.35■□□□□ 0.53
CHPF2-204ENST00000495645 SSH3Q8TE77 659 aa18.35■□□□□ 0.53
CHPF2-204ENST00000495645 TBC1D32Q96NH3 1257 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms