RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 RABEP1Q15276 862 aa18.2■□□□□ 0.5
CHTOP-206ENST00000495554 PNMA6EA0A0J9YXQ4 647 aa18.19■□□□□ 0.5
CHTOP-206ENST00000495554 HSP90AA1P07900 732 aaKnown RBP18.19■□□□□ 0.5
CHTOP-206ENST00000495554 RBM42Q9BTD8 480 aaKnown RBP18.19■□□□□ 0.5
CHTOP-206ENST00000495554 LRRFIP2Q9Y608 721 aaKnown RBP18.19■□□□□ 0.5
CHTOP-206ENST00000495554 GIGYF1O75420 1035 aaPredicted RBP18.19■□□□□ 0.5
CHTOP-206ENST00000495554 UBTFL1P0CB47 393 aaPredicted RBP18.19■□□□□ 0.5
CHTOP-206ENST00000495554 ADAMTS7Q9UKP4 1686 aa18.19■□□□□ 0.5
CHTOP-206ENST00000495554 CRYBG1Q9Y4K1 1723 aa18.19■□□□□ 0.5
CHTOP-206ENST00000495554 REC8O95072 547 aa18.18■□□□□ 0.5
CHTOP-206ENST00000495554 ANXA1P04083 346 aa18.18■□□□□ 0.5
CHTOP-206ENST00000495554 N4BP2Q86UW6 1770 aaPredicted RBP18.18■□□□□ 0.5
CHTOP-206ENST00000495554 IBTKQ9P2D0 1353 aaPredicted RBP18.18■□□□□ 0.5
CHTOP-206ENST00000495554 RAPGEF4Q8WZA2 1011 aa18.18■□□□□ 0.5
CHTOP-206ENST00000495554 SALL3Q9BXA9 1300 aa18.17■□□□□ 0.5
CHTOP-206ENST00000495554 PRAMEF22A3QJZ6 481 aa18.17■□□□□ 0.5
CHTOP-206ENST00000495554 SIPA1L3O60292 1781 aaPredicted RBP18.17■□□□□ 0.5
CHTOP-206ENST00000495554 SRCIN1Q9C0H9 1055 aa18.17■□□□□ 0.5
CHTOP-206ENST00000495554 PI4KAP2A4QPH2 592 aa18.16■□□□□ 0.5
CHTOP-206ENST00000495554 DDX11L8A8MPP1 907 aa18.16■□□□□ 0.5
CHTOP-206ENST00000495554 ERC2O15083 957 aa18.16■□□□□ 0.5
CHTOP-206ENST00000495554 PI4KAP1Q8N8J0 262 aa18.16■□□□□ 0.5
CHTOP-206ENST00000495554 MEGF6O75095 1541 aa18.16■□□□□ 0.5
CHTOP-206ENST00000495554 CPDO75976 1380 aa18.15■□□□□ 0.5
CHTOP-206ENST00000495554 ZNF335Q9H4Z2 1342 aaPredicted RBP18.15■□□□□ 0.5
CHTOP-206ENST00000495554 PHKG2P15735 406 aa18.15■□□□□ 0.5
CHTOP-206ENST00000495554 TATP17735 454 aaPredicted RBP18.15■□□□□ 0.5
CHTOP-206ENST00000495554 MX1P20591 662 aa18.15■□□□□ 0.5
CHTOP-206ENST00000495554 BEND3Q5T5X7 828 aa18.15■□□□□ 0.5
CHTOP-206ENST00000495554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.15■□□□□ 0.5
CHTOP-206ENST00000495554 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
CHTOP-206ENST00000495554 RAB3GAP1Q15042 981 aa18.14■□□□□ 0.49
CHTOP-206ENST00000495554 PROSER3Q2NL68 480 aa18.14■□□□□ 0.49
CHTOP-206ENST00000495554 SSH3Q8TE77 659 aa18.14■□□□□ 0.49
CHTOP-206ENST00000495554 DBF4Q9UBU7 674 aaPredicted RBP18.14■□□□□ 0.49
CHTOP-206ENST00000495554 CSB-PGBD3P0DP91 1061 aa18.14■□□□□ 0.49
CHTOP-206ENST00000495554 DNAAF4Q8WXU2 420 aa18.14■□□□□ 0.49
CHTOP-206ENST00000495554 SLAIN2Q9P270 581 aa18.14■□□□□ 0.49
CHTOP-206ENST00000495554 ADCY9O60503 1353 aa18.14■□□□□ 0.49
CHTOP-206ENST00000495554 IL27Q8NEV9 243 aa18.13■□□□□ 0.49
CHTOP-206ENST00000495554 STAP2Q9UGK3 403 aa18.13■□□□□ 0.49
CHTOP-206ENST00000495554 TNPO1Q92973 898 aaKnown RBP18.13■□□□□ 0.49
CHTOP-206ENST00000495554 SLC52A2Q9HAB3 445 aa18.13■□□□□ 0.49
CHTOP-206ENST00000495554 SPG7Q9UQ90 795 aa18.13■□□□□ 0.49
CHTOP-206ENST00000495554 SOS2Q07890 1332 aaPredicted RBP18.12■□□□□ 0.49
CHTOP-206ENST00000495554 SLC39A6Q13433 755 aa18.12■□□□□ 0.49
CHTOP-206ENST00000495554 CYP27B1O15528 508 aa18.12■□□□□ 0.49
CHTOP-206ENST00000495554 TRAK2O60296 914 aa18.12■□□□□ 0.49
CHTOP-206ENST00000495554 NBPF7P0C2Y1 421 aaPredicted RBP18.12■□□□□ 0.49
CHTOP-206ENST00000495554 NFATC2IPQ8NCF5 419 aa18.12■□□□□ 0.49
CHTOP-206ENST00000495554 GBP4Q96PP9 640 aa18.12■□□□□ 0.49
CHTOP-206ENST00000495554 ABCC6O95255 1503 aa18.12■□□□□ 0.49
CHTOP-206ENST00000495554 RAB11FIP3O75154 756 aa18.11■□□□□ 0.49
CHTOP-206ENST00000495554 ZNF790Q6PG37 636 aa18.11■□□□□ 0.49
CHTOP-206ENST00000495554 IFNL2Q8IZJ0 200 aa18.11■□□□□ 0.49
CHTOP-206ENST00000495554 POLA2Q14181 598 aa18.11■□□□□ 0.49
CHTOP-206ENST00000495554 SCN11AQ9UI33 1791 aa18.11■□□□□ 0.49
CHTOP-206ENST00000495554 AOX1Q06278 1338 aa18.11■□□□□ 0.49
CHTOP-206ENST00000495554 PPP1R42Q7Z4L9 355 aa18.1■□□□□ 0.49
CHTOP-206ENST00000495554 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
CHTOP-206ENST00000495554 ST18O60284 1047 aa18.1■□□□□ 0.49
CHTOP-206ENST00000495554 PDIA6Q15084 440 aa18.1■□□□□ 0.49
CHTOP-206ENST00000495554 TSHZ3Q63HK5 1081 aa18.1■□□□□ 0.49
CHTOP-206ENST00000495554 VSIG10Q8N0Z9 540 aa18.1■□□□□ 0.49
CHTOP-206ENST00000495554 FOXD4L1Q9NU39 408 aa18.1■□□□□ 0.49
CHTOP-206ENST00000495554 L1TD1Q5T7N2 865 aaKnown RBP18.09■□□□□ 0.49
CHTOP-206ENST00000495554 SURF6O75683 361 aaKnown RBP18.08■□□□□ 0.49
CHTOP-206ENST00000495554 PLEKHG2Q9H7P9 1386 aa18.08■□□□□ 0.48
CHTOP-206ENST00000495554 KSR2Q6VAB6 950 aa18.08■□□□□ 0.48
CHTOP-206ENST00000495554 ESYT1Q9BSJ8 1104 aa18.08■□□□□ 0.48
CHTOP-206ENST00000495554 MAP3K2Q9Y2U5 619 aa18.08■□□□□ 0.48
CHTOP-206ENST00000495554 SRGAP3O43295 1099 aa18.07■□□□□ 0.48
CHTOP-206ENST00000495554 PTMSP20962 102 aa18.07■□□□□ 0.48
CHTOP-206ENST00000495554 DDX21Q9NR30 783 aaKnown RBP eCLIP18.07■□□□□ 0.48
CHTOP-206ENST00000495554 TRIM6-TRIM34B2RNG4 842 aa18.07■□□□□ 0.48
CHTOP-206ENST00000495554 DCAF5Q96JK2 942 aa18.07■□□□□ 0.48
CHTOP-206ENST00000495554 HYPKQ9NX55 129 aa18.07■□□□□ 0.48
CHTOP-206ENST00000495554 DHX37Q8IY37 1157 aaKnown RBP18.06■□□□□ 0.48
CHTOP-206ENST00000495554 RILPL2Q969X0 211 aa18.06■□□□□ 0.48
CHTOP-206ENST00000495554 CHMLP26374 656 aa18.06■□□□□ 0.48
CHTOP-206ENST00000495554 HSP90AB4PQ58FF6 505 aa18.06■□□□□ 0.48
CHTOP-206ENST00000495554 RHPN1Q8TCX5 695 aa18.06■□□□□ 0.48
CHTOP-206ENST00000495554 KIF1BPQ96EK5 621 aa18.06■□□□□ 0.48
CHTOP-206ENST00000495554 ZNF496Q96IT1 587 aaPredicted RBP18.06■□□□□ 0.48
CHTOP-206ENST00000495554 IL1RAPL2Q9NP60 686 aa18.06■□□□□ 0.48
CHTOP-206ENST00000495554 PRDM11Q9NQV5 511 aa18.05■□□□□ 0.48
CHTOP-206ENST00000495554 ALDH1L1O75891 902 aa18.05■□□□□ 0.48
CHTOP-206ENST00000495554 CLEC17AQ6ZS10 378 aa18.05■□□□□ 0.48
CHTOP-206ENST00000495554 PKD1L3Q7Z443 1732 aa18.05■□□□□ 0.48
CHTOP-206ENST00000495554 WDR17Q8IZU2 1322 aa18.04■□□□□ 0.48
CHTOP-206ENST00000495554 GZF1Q9H116 711 aaPredicted RBP18.04■□□□□ 0.48
CHTOP-206ENST00000495554 HDAC5Q9UQL6 1122 aa18.04■□□□□ 0.48
CHTOP-206ENST00000495554 TUBGCP6Q96RT7 1819 aa18.04■□□□□ 0.48
CHTOP-206ENST00000495554 MCCP23508 829 aa18.04■□□□□ 0.48
CHTOP-206ENST00000495554 CWC22Q9HCG8 908 aaKnown RBP18.04■□□□□ 0.48
CHTOP-206ENST00000495554 GOLGA6L3A6NEY3 463 aa18.03■□□□□ 0.48
CHTOP-206ENST00000495554 MTX1Q13505 466 aa18.03■□□□□ 0.48
CHTOP-206ENST00000495554 SKOR2Q2VWA4 1001 aaPredicted RBP18.03■□□□□ 0.48
CHTOP-206ENST00000495554 MRC1P22897 1456 aa18.03■□□□□ 0.48
CHTOP-206ENST00000495554 FSD2A1L4K1 749 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms