RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 TMC1Q8TDI8 760 aa11.28□□□□□ -0.6
RPSA-209ENST00000495394 GTF2A1P52655 376 aaPredicted RBP11.28□□□□□ -0.6
RPSA-209ENST00000495394 EIF5P55010 431 aaKnown RBP11.28□□□□□ -0.6
RPSA-209ENST00000495394 PDILTQ8N807 584 aa11.28□□□□□ -0.6
RPSA-209ENST00000495394 KLHL23Q8NBE8 558 aa11.28□□□□□ -0.6
RPSA-209ENST00000495394 TRIM52Q96A61 297 aa11.28□□□□□ -0.6
RPSA-209ENST00000495394 ANKRD13BQ86YJ7 626 aa11.27□□□□□ -0.61
RPSA-209ENST00000495394 ZNF396Q96N95 335 aaPredicted RBP11.27□□□□□ -0.61
RPSA-209ENST00000495394 SPHKAPQ2M3C7 1700 aa11.27□□□□□ -0.61
RPSA-209ENST00000495394 IL16Q14005 1332 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 TIMM44O43615 452 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 CSB-PGBD3P0DP91 1061 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 MS4A1P11836 297 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 EVA1CP58658 441 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 LARP1BQ659C4 914 aaKnown RBP11.26□□□□□ -0.61
RPSA-209ENST00000495394 LARGE2Q8N3Y3 721 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 PAGR1Q9BTK6 254 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 MYO3AQ8NEV4 1616 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 ERVK-7P63135 1459 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 CEBPAP49715 358 aaPredicted RBP11.26□□□□□ -0.61
RPSA-209ENST00000495394 KLHL10Q6JEL2 608 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 TTC30AQ86WT1 665 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 LRRC27Q9C0I9 530 aa11.26□□□□□ -0.61
RPSA-209ENST00000495394 DDX49Q9Y6V7 483 aaKnown RBP11.26□□□□□ -0.61
RPSA-209ENST00000495394 CCDC66A2RUB6 948 aa11.25□□□□□ -0.61
RPSA-209ENST00000495394 U2AF1L5P0DN76 240 aaPredicted RBP11.25□□□□□ -0.61
RPSA-209ENST00000495394 U2AF1Q01081 240 aaKnown RBP eCLIP11.25□□□□□ -0.61
RPSA-209ENST00000495394 E2F5Q15329 346 aa11.25□□□□□ -0.61
RPSA-209ENST00000495394 CCDC70Q6NSX1 233 aa11.25□□□□□ -0.61
RPSA-209ENST00000495394 ZNF142P52746 1687 aaPredicted RBP11.25□□□□□ -0.61
RPSA-209ENST00000495394 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.24□□□□□ -0.61
RPSA-209ENST00000495394 TGFB3P10600 412 aa11.24□□□□□ -0.61
RPSA-209ENST00000495394 AMOTQ4VCS5 1084 aa11.24□□□□□ -0.61
RPSA-209ENST00000495394 DPH6Q7L8W6 267 aa11.24□□□□□ -0.61
RPSA-209ENST00000495394 ZSCAN30Q86W11 494 aa11.24□□□□□ -0.61
RPSA-209ENST00000495394 CCDC146Q8IYE0 955 aa11.24□□□□□ -0.61
RPSA-209ENST00000495394 CCP110O43303 1012 aa11.24□□□□□ -0.61
RPSA-209ENST00000495394 SETSIPP0DME0 302 aa11.24□□□□□ -0.61
RPSA-209ENST00000495394 KCNA2P16389 499 aa11.24□□□□□ -0.61
RPSA-209ENST00000495394 SND1Q7KZF4 910 aaKnown RBP eCLIP11.24□□□□□ -0.61
RPSA-209ENST00000495394 TEX13AQ9BXU3 409 aaPredicted RBP11.24□□□□□ -0.61
RPSA-209ENST00000495394 KLF15Q9UIH9 416 aa11.24□□□□□ -0.61
RPSA-209ENST00000495394 ANKRD33BA6NCL7 494 aa11.23□□□□□ -0.61
RPSA-209ENST00000495394 TRPC1P48995 793 aa11.23□□□□□ -0.61
RPSA-209ENST00000495394 IQCF2Q8IXL9 164 aa11.23□□□□□ -0.61
RPSA-209ENST00000495394 TIGD1Q96MW7 591 aa11.23□□□□□ -0.61
RPSA-209ENST00000495394 AGAP3Q96P47 875 aa11.23□□□□□ -0.61
RPSA-209ENST00000495394 ZNF232Q9UNY5 417 aa11.23□□□□□ -0.61
RPSA-209ENST00000495394 NOS1P29475 1434 aa11.23□□□□□ -0.61
RPSA-209ENST00000495394 SYNMO15061 1565 aa11.23□□□□□ -0.61
RPSA-209ENST00000495394 RIPK4P57078 832 aa11.23□□□□□ -0.61
RPSA-209ENST00000495394 IGBP1P78318 339 aa11.23□□□□□ -0.61
RPSA-209ENST00000495394 VPS37AQ8NEZ2 397 aa11.23□□□□□ -0.61
RPSA-209ENST00000495394 CCDC47Q96A33 483 aaKnown RBP11.23□□□□□ -0.61
RPSA-209ENST00000495394 UTP6Q9NYH9 597 aaKnown RBP11.23□□□□□ -0.61
RPSA-209ENST00000495394 TNRQ92752 1358 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 MED1Q15648 1581 aaPredicted RBP11.22□□□□□ -0.61
RPSA-209ENST00000495394 hCG_2014768A0A024R1R8 64 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 KIF5CO60282 957 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 ZMYND10O75800 440 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 MAGEA8P43361 318 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 FBXO31Q5XUX0 539 aaPredicted RBP11.22□□□□□ -0.61
RPSA-209ENST00000495394 MPHOSPH9Q99550 1183 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 LZTS2Q9BRK4 669 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 POLR3CQ9BUI4 534 aaPredicted RBP11.22□□□□□ -0.61
RPSA-209ENST00000495394 FAM117AQ9C073 453 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 RMI1Q9H9A7 625 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 IFT122Q9HBG6 1241 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 IQSEC3Q9UPP2 1182 aaPredicted RBP11.22□□□□□ -0.61
RPSA-209ENST00000495394 KIF3AQ9Y496 699 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 PIK3C2BO00750 1634 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 NLRP1Q9C000 1473 aa11.22□□□□□ -0.61
RPSA-209ENST00000495394 KDM5AP29375 1690 aaKnown RBP11.22□□□□□ -0.61
RPSA-209ENST00000495394 ANKRD18BA2A2Z9 1011 aa11.21□□□□□ -0.61
RPSA-209ENST00000495394 FAM163BP0C2L3 166 aa11.21□□□□□ -0.61
RPSA-209ENST00000495394 PCGF5Q86SE9 256 aa11.21□□□□□ -0.61
RPSA-209ENST00000495394 DIS3Q9Y2L1 958 aaKnown RBP11.21□□□□□ -0.61
RPSA-209ENST00000495394 CEP170BQ9Y4F5 1589 aaPredicted RBP11.21□□□□□ -0.61
RPSA-209ENST00000495394 TRPM2O94759 1503 aa11.21□□□□□ -0.61
RPSA-209ENST00000495394 GIGYF1O75420 1035 aaPredicted RBP11.21□□□□□ -0.62
RPSA-209ENST00000495394 NBPF7P0C2Y1 421 aaPredicted RBP11.21□□□□□ -0.62
RPSA-209ENST00000495394 RASA3Q14644 834 aa11.21□□□□□ -0.62
RPSA-209ENST00000495394 SAMD3Q8N6K7 520 aa11.21□□□□□ -0.62
RPSA-209ENST00000495394 CDC5LQ99459 802 aaKnown RBP11.21□□□□□ -0.62
RPSA-209ENST00000495394 NOL10Q9BSC4 688 aaKnown RBP11.21□□□□□ -0.62
RPSA-209ENST00000495394 UBAP1LF5GYI3 381 aa11.2□□□□□ -0.62
RPSA-209ENST00000495394 CATIPQ7Z7H3 387 aa11.2□□□□□ -0.62
RPSA-209ENST00000495394 NEUROD6Q96NK8 337 aa11.2□□□□□ -0.62
RPSA-209ENST00000495394 H0YHG0 523 aa11.2□□□□□ -0.62
RPSA-209ENST00000495394 SARNPP82979 210 aaKnown RBP11.2□□□□□ -0.62
RPSA-209ENST00000495394 SLC26A8Q96RN1 970 aa11.2□□□□□ -0.62
RPSA-209ENST00000495394 RPS6KC1Q96S38 1066 aa11.2□□□□□ -0.62
RPSA-209ENST00000495394 QTRT2Q9H974 415 aaKnown RBP11.2□□□□□ -0.62
RPSA-209ENST00000495394 SCINQ9Y6U3 715 aa11.2□□□□□ -0.62
RPSA-209ENST00000495394 A2ML1A8K2U0 1454 aa11.19□□□□□ -0.62
RPSA-209ENST00000495394 UBR1Q8IWV7 1749 aa11.19□□□□□ -0.62
RPSA-209ENST00000495394 GUCY2CP25092 1073 aa11.19□□□□□ -0.62
RPSA-209ENST00000495394 TRDNQ13061 729 aa11.19□□□□□ -0.62
RPSA-209ENST00000495394 TSNAXIP1Q2TAA8 658 aa11.19□□□□□ -0.62
RPSA-209ENST00000495394 DNAJC21Q5F1R6 531 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms