RNA–Protein interactions for RNA: ENST00000495360.5

APTX-232, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 1,313 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-232ENST00000495360 CANXP27824 592 aaKnown RBP23.03■■□□□ 1.28
APTX-232ENST00000495360 TGFB2P61812 414 aa23.03■■□□□ 1.28
APTX-232ENST00000495360 MCM10Q7L590 875 aa23.03■■□□□ 1.28
APTX-232ENST00000495360 FMNL2Q96PY5 1086 aa23.03■■□□□ 1.28
APTX-232ENST00000495360 DDR1Q08345 913 aa23.02■■□□□ 1.28
APTX-232ENST00000495360 NEFMP07197 916 aa23.01■■□□□ 1.27
APTX-232ENST00000495360 TEX13AQ9BXU3 409 aaPredicted RBP23.01■■□□□ 1.27
APTX-232ENST00000495360 NARFQ9UHQ1 456 aa23.01■■□□□ 1.27
APTX-232ENST00000495360 A0A0G2JLW4 131 aa23■■□□□ 1.27
APTX-232ENST00000495360 N4BP2Q86UW6 1770 aaPredicted RBP23■■□□□ 1.27
APTX-232ENST00000495360 KCNQ3O43525 872 aa22.99■■□□□ 1.27
APTX-232ENST00000495360 POLRMTO00411 1230 aaKnown RBP22.98■■□□□ 1.27
APTX-232ENST00000495360 HTATSF1O43719 755 aaKnown RBP22.98■■□□□ 1.27
APTX-232ENST00000495360 DPEP1P16444 411 aa22.98■■□□□ 1.27
APTX-232ENST00000495360 TM4SF1P30408 202 aa22.98■■□□□ 1.27
APTX-232ENST00000495360 DDX10Q13206 875 aaKnown RBP22.98■■□□□ 1.27
APTX-232ENST00000495360 DCTN1Q14203 1278 aa22.98■■□□□ 1.27
APTX-232ENST00000495360 RALBP1Q15311 655 aa22.97■■□□□ 1.27
APTX-232ENST00000495360 A0A087WZG4 1122 aa22.96■■□□□ 1.27
APTX-232ENST00000495360 EIF5P55010 431 aaKnown RBP22.96■■□□□ 1.27
APTX-232ENST00000495360 BCS1LQ9Y276 419 aa22.96■■□□□ 1.27
APTX-232ENST00000495360 NFIXQ14938 502 aa22.95■■□□□ 1.26
APTX-232ENST00000495360 BCL2L12Q9HB09 334 aa22.95■■□□□ 1.26
APTX-232ENST00000495360 ZNF330Q9Y3S2 320 aaPredicted RBP22.95■■□□□ 1.26
APTX-232ENST00000495360 PLEKHF1Q96S99 279 aa22.94■■□□□ 1.26
APTX-232ENST00000495360 A1BGP04217 495 aa22.93■■□□□ 1.26
APTX-232ENST00000495360 PNNQ9H307 717 aaKnown RBP22.93■■□□□ 1.26
APTX-232ENST00000495360 MAPK8IP3Q9UPT6 1336 aa22.93■■□□□ 1.26
APTX-232ENST00000495360 IL6STP40189 918 aaPredicted RBP22.92■■□□□ 1.26
APTX-232ENST00000495360 ATP10DQ9P241 1426 aa22.92■■□□□ 1.26
APTX-232ENST00000495360 SCN7AQ01118 1682 aa22.92■■□□□ 1.26
APTX-232ENST00000495360 KCNA3P22001 575 aa22.91■■□□□ 1.26
APTX-232ENST00000495360 TAF7Q15545 349 aaPredicted RBP22.91■■□□□ 1.26
APTX-232ENST00000495360 NFE2L2Q16236 605 aa22.91■■□□□ 1.26
APTX-232ENST00000495360 NPM2Q86SE8 214 aaKnown RBP22.91■■□□□ 1.26
APTX-232ENST00000495360 PRAMEF22A3QJZ6 481 aa22.9■■□□□ 1.26
APTX-232ENST00000495360 SNRPA1P09661 255 aaKnown RBP22.9■■□□□ 1.26
APTX-232ENST00000495360 TBC1D2BQ9UPU7 963 aa22.9■■□□□ 1.26
APTX-232ENST00000495360 USP16Q9Y5T5 823 aa22.9■■□□□ 1.26
APTX-232ENST00000495360 ADCY9O60503 1353 aa22.9■■□□□ 1.26
APTX-232ENST00000495360 BRCA1P38398 1863 aaKnown RBP22.9■■□□□ 1.26
APTX-232ENST00000495360 NRXN2Q9P2S2 1712 aa22.89■■□□□ 1.26
APTX-232ENST00000495360 SERPINB2P05120 415 aa22.89■■□□□ 1.26
APTX-232ENST00000495360 CHRNA5P30532 468 aa22.89■■□□□ 1.26
APTX-232ENST00000495360 BICDL1Q6ZP65 573 aa22.89■■□□□ 1.26
APTX-232ENST00000495360 PIM2Q9P1W9 311 aa22.89■■□□□ 1.26
APTX-232ENST00000495360 MYBBP1AQ9BQG0 1328 aaKnown RBP22.89■■□□□ 1.25
APTX-232ENST00000495360 DLG5Q8TDM6 1919 aa22.89■■□□□ 1.25
APTX-232ENST00000495360 AFDNP55196 1824 aaKnown RBP22.88■■□□□ 1.25
APTX-232ENST00000495360 GIGYF1O75420 1035 aaPredicted RBP22.87■■□□□ 1.25
APTX-232ENST00000495360 MIS18AQ9NYP9 233 aa22.87■■□□□ 1.25
APTX-232ENST00000495360 PIP4K2AP48426 406 aaPredicted RBP22.86■■□□□ 1.25
APTX-232ENST00000495360 TBC1D9BQ66K14 1250 aa22.86■■□□□ 1.25
APTX-232ENST00000495360 ARHGAP27Q6ZUM4 889 aa22.86■■□□□ 1.25
APTX-232ENST00000495360 THUMPD2Q9BTF0 503 aaKnown RBP22.86■■□□□ 1.25
APTX-232ENST00000495360 DALRD3Q5D0E6 543 aaKnown RBP22.85■■□□□ 1.25
APTX-232ENST00000495360 PNISRQ8TF01 805 aaKnown RBP22.85■■□□□ 1.25
APTX-232ENST00000495360 UTRNP46939 3433 aa22.85■■□□□ 1.25
APTX-232ENST00000495360 KDM3BQ7LBC6 1761 aa22.84■■□□□ 1.25
APTX-232ENST00000495360 CAMTA2O94983 1202 aa22.84■■□□□ 1.25
APTX-232ENST00000495360 DZIP3Q86Y13 1208 aaKnown RBP22.84■■□□□ 1.25
APTX-232ENST00000495360 BCORQ6W2J9 1755 aa22.84■■□□□ 1.25
APTX-232ENST00000495360 C1QTNF8P60827 252 aa22.83■■□□□ 1.25
APTX-232ENST00000495360 ZNF526Q8TF50 670 aaPredicted RBP22.83■■□□□ 1.25
APTX-232ENST00000495360 CARMIL3Q8ND23 1372 aa22.83■■□□□ 1.25
APTX-232ENST00000495360 ARFGEF1Q9Y6D6 1849 aa22.83■■□□□ 1.25
APTX-232ENST00000495360 GPBP1L1Q9HC44 474 aaPredicted RBP22.82■■□□□ 1.24
APTX-232ENST00000495360 LAMB4A4D0S4 1761 aa22.82■■□□□ 1.24
APTX-232ENST00000495360 NBPF26B4DH59 902 aa22.8■■□□□ 1.24
APTX-232ENST00000495360 RIPK4P57078 832 aa22.8■■□□□ 1.24
APTX-232ENST00000495360 NBPF10Q6P3W6 841 aaKnown RBP22.8■■□□□ 1.24
APTX-232ENST00000495360 C2CD5Q86YS7 1000 aa22.8■■□□□ 1.24
APTX-232ENST00000495360 NBPF15Q8N660 670 aa22.8■■□□□ 1.24
APTX-232ENST00000495360 SETDB2Q96T68 719 aa22.8■■□□□ 1.24
APTX-232ENST00000495360 DLEC1Q9Y238 1755 aa22.79■■□□□ 1.24
APTX-232ENST00000495360 EIF4A1P60842 406 aaKnown RBP22.79■■□□□ 1.24
APTX-232ENST00000495360 H0YIN7 160 aa22.78■■□□□ 1.24
APTX-232ENST00000495360 WDR43Q15061 677 aaKnown RBP eCLIP22.78■■□□□ 1.24
APTX-232ENST00000495360 PRR5LQ6MZQ0 368 aa22.78■■□□□ 1.24
APTX-232ENST00000495360 ZNF652Q9Y2D9 606 aa22.78■■□□□ 1.24
APTX-232ENST00000495360 GOLGB1Q14789 3259 aaKnown RBP22.77■■□□□ 1.24
APTX-232ENST00000495360 NPHP1O15259 732 aa22.77■■□□□ 1.24
APTX-232ENST00000495360 TMPOP42166 694 aaKnown RBP22.77■■□□□ 1.24
APTX-232ENST00000495360 LMOD3Q0VAK6 560 aa22.77■■□□□ 1.24
APTX-232ENST00000495360 CCDC146Q8IYE0 955 aa22.77■■□□□ 1.24
APTX-232ENST00000495360 CCDC24Q8N4L8 307 aa22.77■■□□□ 1.24
APTX-232ENST00000495360 CNBD1Q8NA66 436 aa22.77■■□□□ 1.24
APTX-232ENST00000495360 CLEC4GQ6UXB4 293 aa22.76■■□□□ 1.23
APTX-232ENST00000495360 BRIP1Q9BX63 1249 aa22.76■■□□□ 1.23
APTX-232ENST00000495360 PRKRIP1Q9H875 184 aaPredicted RBP22.76■■□□□ 1.23
APTX-232ENST00000495360 ANKRD31Q8N7Z5 1873 aa22.75■■□□□ 1.23
APTX-232ENST00000495360 PDE6BP35913 854 aa22.75■■□□□ 1.23
APTX-232ENST00000495360 C9orf131Q5VYM1 1079 aa22.75■■□□□ 1.23
APTX-232ENST00000495360 TTLL6Q8N841 843 aa22.75■■□□□ 1.23
APTX-232ENST00000495360 TSPYL4Q9UJ04 414 aa22.75■■□□□ 1.23
APTX-232ENST00000495360 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
APTX-232ENST00000495360 ST5P78524 1137 aa22.74■■□□□ 1.23
APTX-232ENST00000495360 PDZRN3Q9UPQ7 1066 aa22.74■■□□□ 1.23
APTX-232ENST00000495360 SENP3-EIF4A1A0A087X0R7 540 aa22.73■■□□□ 1.23
APTX-232ENST00000495360 RUNDC1Q96C34 613 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms