RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 MAPK8IP3Q9UPT6 1336 aa17.69■□□□□ 0.42
RBM28-208ENST00000495327 BRCA1P38398 1863 aaKnown RBP17.68■□□□□ 0.42
RBM28-208ENST00000495327 NFE2L2Q16236 605 aa17.68■□□□□ 0.42
RBM28-208ENST00000495327 C10orf71Q711Q0 1435 aa17.68■□□□□ 0.42
RBM28-208ENST00000495327 FMNL2Q96PY5 1086 aa17.68■□□□□ 0.42
RBM28-208ENST00000495327 TEX13AQ9BXU3 409 aaPredicted RBP17.68■□□□□ 0.42
RBM28-208ENST00000495327 ZBTB1Q9Y2K1 713 aa17.68■□□□□ 0.42
RBM28-208ENST00000495327 AFDNP55196 1824 aaKnown RBP17.68■□□□□ 0.42
RBM28-208ENST00000495327 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
RBM28-208ENST00000495327 STARD3NLO95772 234 aa17.67■□□□□ 0.42
RBM28-208ENST00000495327 MMP10P09238 476 aa17.67■□□□□ 0.42
RBM28-208ENST00000495327 N4BP2Q86UW6 1770 aaPredicted RBP17.66■□□□□ 0.42
RBM28-208ENST00000495327 DCTN1Q14203 1278 aa17.66■□□□□ 0.42
RBM28-208ENST00000495327 SRP68Q9UHB9 627 aaKnown RBP17.65■□□□□ 0.42
RBM28-208ENST00000495327 KCNQ3O43525 872 aa17.64■□□□□ 0.41
RBM28-208ENST00000495327 PXDNLA1KZ92 1463 aa17.63■□□□□ 0.41
RBM28-208ENST00000495327 TAF7Q15545 349 aaPredicted RBP17.63■□□□□ 0.41
RBM28-208ENST00000495327 NARFQ9UHQ1 456 aa17.63■□□□□ 0.41
RBM28-208ENST00000495327 ZPR1O75312 459 aa17.62■□□□□ 0.41
RBM28-208ENST00000495327 EIF5P55010 431 aaKnown RBP17.62■□□□□ 0.41
RBM28-208ENST00000495327 FKBP8Q14318 412 aa17.62■□□□□ 0.41
RBM28-208ENST00000495327 GPR162Q16538 588 aa17.62■□□□□ 0.41
RBM28-208ENST00000495327 DLEC1Q9Y238 1755 aa17.61■□□□□ 0.41
RBM28-208ENST00000495327 YY1P25490 414 aa17.61■□□□□ 0.41
RBM28-208ENST00000495327 IL6STP40189 918 aaPredicted RBP17.61■□□□□ 0.41
RBM28-208ENST00000495327 WDR43Q15061 677 aaKnown RBP eCLIP17.61■□□□□ 0.41
RBM28-208ENST00000495327 USPL1Q5W0Q7 1092 aa17.61■□□□□ 0.41
RBM28-208ENST00000495327 PNISRQ8TF01 805 aaKnown RBP17.61■□□□□ 0.41
RBM28-208ENST00000495327 PARP3Q9Y6F1 533 aa17.61■□□□□ 0.41
RBM28-208ENST00000495327 ARFGEF1Q9Y6D6 1849 aa17.61■□□□□ 0.41
RBM28-208ENST00000495327 CANXP27824 592 aaKnown RBP17.6■□□□□ 0.41
RBM28-208ENST00000495327 A0A087WZG4 1122 aa17.59■□□□□ 0.41
RBM28-208ENST00000495327 ZNF316A6NFI3 1004 aaPredicted RBP17.59■□□□□ 0.41
RBM28-208ENST00000495327 SNRPA1P09661 255 aaKnown RBP17.59■□□□□ 0.41
RBM28-208ENST00000495327 YBX3P16989 372 aaKnown RBP eCLIP17.59■□□□□ 0.41
RBM28-208ENST00000495327 TMPOP42166 694 aaKnown RBP17.59■□□□□ 0.41
RBM28-208ENST00000495327 DDR1Q08345 913 aa17.59■□□□□ 0.41
RBM28-208ENST00000495327 GRIN3BO60391 1043 aa17.58■□□□□ 0.4
RBM28-208ENST00000495327 TM4SF1P30408 202 aa17.58■□□□□ 0.4
RBM28-208ENST00000495327 LMOD3Q0VAK6 560 aa17.58■□□□□ 0.4
RBM28-208ENST00000495327 PELP1Q8IZL8 1130 aaKnown RBP17.58■□□□□ 0.4
RBM28-208ENST00000495327 BCL2L12Q9HB09 334 aa17.58■□□□□ 0.4
RBM28-208ENST00000495327 POLRMTO00411 1230 aaKnown RBP17.57■□□□□ 0.4
RBM28-208ENST00000495327 RIPK4P57078 832 aa17.57■□□□□ 0.4
RBM28-208ENST00000495327 TGFB2P61812 414 aa17.57■□□□□ 0.4
RBM28-208ENST00000495327 RUNDC1Q96C34 613 aa17.57■□□□□ 0.4
RBM28-208ENST00000495327 THUMPD2Q9BTF0 503 aaKnown RBP17.57■□□□□ 0.4
RBM28-208ENST00000495327 USP16Q9Y5T5 823 aa17.57■□□□□ 0.4
RBM28-208ENST00000495327 PRAMEF22A3QJZ6 481 aa17.56■□□□□ 0.4
RBM28-208ENST00000495327 A1BGP04217 495 aa17.56■□□□□ 0.4
RBM28-208ENST00000495327 ANKRD31Q8N7Z5 1873 aa17.56■□□□□ 0.4
RBM28-208ENST00000495327 NFIXQ14938 502 aa17.55■□□□□ 0.4
RBM28-208ENST00000495327 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
RBM28-208ENST00000495327 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
RBM28-208ENST00000495327 ADAMTS8Q9UP79 889 aa17.55■□□□□ 0.4
RBM28-208ENST00000495327 BABAM1Q9NWV8 329 aa17.54■□□□□ 0.4
RBM28-208ENST00000495327 EIF4A1P60842 406 aaKnown RBP17.53■□□□□ 0.4
RBM28-208ENST00000495327 NPM2Q86SE8 214 aaKnown RBP17.53■□□□□ 0.4
RBM28-208ENST00000495327 ZNF330Q9Y3S2 320 aaPredicted RBP17.53■□□□□ 0.4
RBM28-208ENST00000495327 NUP98P52948 1817 aa17.53■□□□□ 0.4
RBM28-208ENST00000495327 GIGYF1O75420 1035 aaPredicted RBP17.52■□□□□ 0.4
RBM28-208ENST00000495327 CAMTA2O94983 1202 aa17.52■□□□□ 0.4
RBM28-208ENST00000495327 TSPYL4Q9UJ04 414 aa17.52■□□□□ 0.4
RBM28-208ENST00000495327 COL11A2P13942 1736 aaPredicted RBP17.52■□□□□ 0.39
RBM28-208ENST00000495327 CARMIL3Q8ND23 1372 aa17.52■□□□□ 0.39
RBM28-208ENST00000495327 RGL2O15211 777 aa17.51■□□□□ 0.39
RBM28-208ENST00000495327 DZIP3Q86Y13 1208 aaKnown RBP17.51■□□□□ 0.39
RBM28-208ENST00000495327 TBC1D2BQ9UPU7 963 aa17.51■□□□□ 0.39
RBM28-208ENST00000495327 RRP7AQ9Y3A4 280 aaKnown RBP17.51■□□□□ 0.39
RBM28-208ENST00000495327 NBPF26B4DH59 902 aa17.5■□□□□ 0.39
RBM28-208ENST00000495327 DPEP1P16444 411 aa17.5■□□□□ 0.39
RBM28-208ENST00000495327 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
RBM28-208ENST00000495327 NBPF10Q6P3W6 841 aaKnown RBP17.5■□□□□ 0.39
RBM28-208ENST00000495327 NBPF15Q8N660 670 aa17.5■□□□□ 0.39
RBM28-208ENST00000495327 TRIM35Q9UPQ4 493 aa17.5■□□□□ 0.39
RBM28-208ENST00000495327 ARFGEF2Q9Y6D5 1785 aa17.5■□□□□ 0.39
RBM28-208ENST00000495327 A0A0G2JLW4 131 aa17.49■□□□□ 0.39
RBM28-208ENST00000495327 SERPINB2P05120 415 aa17.49■□□□□ 0.39
RBM28-208ENST00000495327 TBC1D9BQ66K14 1250 aa17.49■□□□□ 0.39
RBM28-208ENST00000495327 ERBB4Q15303 1308 aa17.48■□□□□ 0.39
RBM28-208ENST00000495327 KCNA3P22001 575 aa17.48■□□□□ 0.39
RBM28-208ENST00000495327 NEUROD2Q15784 382 aa17.48■□□□□ 0.39
RBM28-208ENST00000495327 CLEC4GQ6UXB4 293 aa17.48■□□□□ 0.39
RBM28-208ENST00000495327 ANKRD36CQ5JPF3 1778 aa17.48■□□□□ 0.39
RBM28-208ENST00000495327 WWC3Q9ULE0 1092 aa17.47■□□□□ 0.39
RBM28-208ENST00000495327 ZNF652Q9Y2D9 606 aa17.47■□□□□ 0.39
RBM28-208ENST00000495327 ADCY9O60503 1353 aa17.47■□□□□ 0.39
RBM28-208ENST00000495327 CACNA1SQ13698 1873 aa17.46■□□□□ 0.39
RBM28-208ENST00000495327 BICDL1Q6ZP65 573 aa17.46■□□□□ 0.39
RBM28-208ENST00000495327 ZNF784Q8NCA9 323 aaPredicted RBP17.46■□□□□ 0.39
RBM28-208ENST00000495327 BCS1LQ9Y276 419 aa17.46■□□□□ 0.39
RBM28-208ENST00000495327 CHL1O00533 1208 aa17.45■□□□□ 0.38
RBM28-208ENST00000495327 ANP32CO43423 234 aa17.45■□□□□ 0.38
RBM28-208ENST00000495327 PIM2Q9P1W9 311 aa17.45■□□□□ 0.38
RBM28-208ENST00000495327 SBF1O95248 1867 aa17.44■□□□□ 0.38
RBM28-208ENST00000495327 CHRNA5P30532 468 aa17.44■□□□□ 0.38
RBM28-208ENST00000495327 CCDC184Q52MB2 194 aa17.44■□□□□ 0.38
RBM28-208ENST00000495327 PRR5LQ6MZQ0 368 aa17.44■□□□□ 0.38
RBM28-208ENST00000495327 SETDB2Q96T68 719 aa17.44■□□□□ 0.38
RBM28-208ENST00000495327 ATP10DQ9P241 1426 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms