RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CYP19A1P11511 503 aaPredicted RBP19.36■□□□□ 0.69
VARS-228ENST00000495010 SLC39A6Q13433 755 aa19.36■□□□□ 0.69
VARS-228ENST00000495010 SMC1BQ8NDV3 1235 aa19.36■□□□□ 0.69
VARS-228ENST00000495010 RNMTO43148 476 aaKnown RBP19.35■□□□□ 0.69
VARS-228ENST00000495010 NFIXQ14938 502 aa19.35■□□□□ 0.69
VARS-228ENST00000495010 COL15A1P39059 1388 aa19.34■□□□□ 0.69
VARS-228ENST00000495010 TNRC6CQ9HCJ0 1690 aaKnown RBP19.34■□□□□ 0.69
VARS-228ENST00000495010 ZC3H4Q9UPT8 1303 aaKnown RBP19.34■□□□□ 0.69
VARS-228ENST00000495010 SERPINB2P05120 415 aa19.34■□□□□ 0.69
VARS-228ENST00000495010 HMOX1P09601 288 aa19.34■□□□□ 0.69
VARS-228ENST00000495010 LMNB1P20700 586 aa19.34■□□□□ 0.69
VARS-228ENST00000495010 RASSF7Q02833 373 aa19.34■□□□□ 0.69
VARS-228ENST00000495010 TTLL6Q8N841 843 aa19.33■□□□□ 0.68
VARS-228ENST00000495010 ZBTB1Q9Y2K1 713 aa19.33■□□□□ 0.68
VARS-228ENST00000495010 SBF1O95248 1867 aa19.33■□□□□ 0.68
VARS-228ENST00000495010 H0YIN7 160 aa19.32■□□□□ 0.68
VARS-228ENST00000495010 CANXP27824 592 aaKnown RBP19.32■□□□□ 0.68
VARS-228ENST00000495010 C2CD5Q86YS7 1000 aa19.32■□□□□ 0.68
VARS-228ENST00000495010 VSIG10Q8N0Z9 540 aa19.32■□□□□ 0.68
VARS-228ENST00000495010 ADAMTS7Q9UKP4 1686 aa19.32■□□□□ 0.68
VARS-228ENST00000495010 TTC5Q8N0Z6 440 aa19.31■□□□□ 0.68
VARS-228ENST00000495010 JMYQ8N9B5 988 aa19.31■□□□□ 0.68
VARS-228ENST00000495010 A0A087WZG4 1122 aa19.3■□□□□ 0.68
VARS-228ENST00000495010 GLTPD2A6NH11 291 aa19.3■□□□□ 0.68
VARS-228ENST00000495010 STARD3NLO95772 234 aa19.3■□□□□ 0.68
VARS-228ENST00000495010 VEGFAP15692 232 aaPredicted RBP19.3■□□□□ 0.68
VARS-228ENST00000495010 MTHFSDQ2M296 383 aaKnown RBP19.3■□□□□ 0.68
VARS-228ENST00000495010 BICDL1Q6ZP65 573 aa19.3■□□□□ 0.68
VARS-228ENST00000495010 AFDNP55196 1824 aaKnown RBP19.3■□□□□ 0.68
VARS-228ENST00000495010 MRC1P22897 1456 aa19.29■□□□□ 0.68
VARS-228ENST00000495010 DIAPH1O60610 1272 aaKnown RBP19.28■□□□□ 0.68
VARS-228ENST00000495010 AMER1Q5JTC6 1135 aaPredicted RBP19.28■□□□□ 0.68
VARS-228ENST00000495010 BCL2L12Q9HB09 334 aa19.28■□□□□ 0.68
VARS-228ENST00000495010 DPY19L2Q6NUT2 758 aa19.27■□□□□ 0.68
VARS-228ENST00000495010 NPM2Q86SE8 214 aaKnown RBP19.27■□□□□ 0.68
VARS-228ENST00000495010 NRXN2Q9P2S2 1712 aa19.26■□□□□ 0.67
VARS-228ENST00000495010 COL13A1Q5TAT6 717 aaPredicted RBP19.26■□□□□ 0.67
VARS-228ENST00000495010 ZNF622Q969S3 477 aaKnown RBP eCLIP19.26■□□□□ 0.678e-10■□□□□ 9.5
VARS-228ENST00000495010 PDZRN3Q9UPQ7 1066 aa19.26■□□□□ 0.67
VARS-228ENST00000495010 ZNF330Q9Y3S2 320 aaPredicted RBP19.26■□□□□ 0.67
VARS-228ENST00000495010 VIRMAQ69YN4 1812 aaKnown RBP19.25■□□□□ 0.67
VARS-228ENST00000495010 TEFQ10587 303 aa19.25■□□□□ 0.67
VARS-228ENST00000495010 TEX13AQ9BXU3 409 aaPredicted RBP19.25■□□□□ 0.67
VARS-228ENST00000495010 DLEC1Q9Y238 1755 aa19.24■□□□□ 0.67
VARS-228ENST00000495010 NPHP1O15259 732 aa19.24■□□□□ 0.67
VARS-228ENST00000495010 PDE6BP35913 854 aa19.24■□□□□ 0.67
VARS-228ENST00000495010 ZNF219Q9P2Y4 722 aaPredicted RBP19.24■□□□□ 0.67
VARS-228ENST00000495010 CARMIL3Q8ND23 1372 aa19.23■□□□□ 0.67
VARS-228ENST00000495010 PRELPP51888 382 aa19.23■□□□□ 0.67
VARS-228ENST00000495010 EIF5P55010 431 aaKnown RBP19.23■□□□□ 0.67
VARS-228ENST00000495010 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
VARS-228ENST00000495010 TNS4Q8IZW8 715 aa19.23■□□□□ 0.67
VARS-228ENST00000495010 CCER1Q8TC90 406 aaPredicted RBP19.23■□□□□ 0.67
VARS-228ENST00000495010 NFKBIEO00221 500 aa19.22■□□□□ 0.67
VARS-228ENST00000495010 U2SURPO15042 1029 aaKnown RBP19.22■□□□□ 0.67
VARS-228ENST00000495010 CAPN15O75808 1086 aa19.22■□□□□ 0.67
VARS-228ENST00000495010 TBC1D9BQ66K14 1250 aa19.22■□□□□ 0.67
VARS-228ENST00000495010 BRIP1Q9BX63 1249 aa19.22■□□□□ 0.67
VARS-228ENST00000495010 GNAT3A8MTJ3 354 aa19.21■□□□□ 0.67
VARS-228ENST00000495010 C21orf2O43822 256 aa19.21■□□□□ 0.67
VARS-228ENST00000495010 ERFEQ4G0M1 354 aa19.21■□□□□ 0.67
VARS-228ENST00000495010 ZNF790Q6PG37 636 aa19.21■□□□□ 0.67
VARS-228ENST00000495010 TIAM2Q8IVF5 1701 aa19.21■□□□□ 0.67
VARS-228ENST00000495010 GAS2L2Q8NHY3 880 aa19.21■□□□□ 0.67
VARS-228ENST00000495010 TBC1D2BQ9UPU7 963 aa19.21■□□□□ 0.67
VARS-228ENST00000495010 CCDC88AQ3V6T2 1871 aa19.2■□□□□ 0.66
VARS-228ENST00000495010 UBR2Q8IWV8 1755 aa19.2■□□□□ 0.66
VARS-228ENST00000495010 ZNF496Q96IT1 587 aaPredicted RBP19.2■□□□□ 0.66
VARS-228ENST00000495010 KIF7Q2M1P5 1343 aa19.2■□□□□ 0.66
VARS-228ENST00000495010 HEG1Q9ULI3 1381 aa19.19■□□□□ 0.66
VARS-228ENST00000495010 IL6STP40189 918 aaPredicted RBP19.19■□□□□ 0.66
VARS-228ENST00000495010 PRR5LQ6MZQ0 368 aa19.19■□□□□ 0.66
VARS-228ENST00000495010 CCDC24Q8N4L8 307 aa19.19■□□□□ 0.66
VARS-228ENST00000495010 SETDB2Q96T68 719 aa19.19■□□□□ 0.66
VARS-228ENST00000495010 ST5P78524 1137 aa19.18■□□□□ 0.66
VARS-228ENST00000495010 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
VARS-228ENST00000495010 CNBD1Q8NA66 436 aa19.18■□□□□ 0.66
VARS-228ENST00000495010 FMNL2Q96PY5 1086 aa19.18■□□□□ 0.66
VARS-228ENST00000495010 HSPA1AP0DMV8 641 aaKnown RBP19.17■□□□□ 0.66
VARS-228ENST00000495010 HSPA1BP0DMV9 641 aaKnown RBP19.17■□□□□ 0.66
VARS-228ENST00000495010 IL17REQ8NFR9 667 aa19.17■□□□□ 0.66
VARS-228ENST00000495010 CNKSR1Q969H4 720 aa19.17■□□□□ 0.66
VARS-228ENST00000495010 TAOK3Q9H2K8 898 aa19.17■□□□□ 0.66
VARS-228ENST00000495010 POTECB2RU33 542 aa19.16■□□□□ 0.66
VARS-228ENST00000495010 PER1O15534 1290 aaPredicted RBP19.15■□□□□ 0.66
VARS-228ENST00000495010 A1BGP04217 495 aa19.15■□□□□ 0.66
VARS-228ENST00000495010 SOGA3Q5TF21 947 aa19.15■□□□□ 0.66
VARS-228ENST00000495010 SCN7AQ01118 1682 aa19.14■□□□□ 0.66
VARS-228ENST00000495010 ANKRD31Q8N7Z5 1873 aa19.14■□□□□ 0.65
VARS-228ENST00000495010 BTBD11A6QL63 1104 aa19.14■□□□□ 0.65
VARS-228ENST00000495010 STYK1Q6J9G0 422 aa19.14■□□□□ 0.65
VARS-228ENST00000495010 CHADLQ6NUI6 762 aa19.14■□□□□ 0.65
VARS-228ENST00000495010 LTBP3Q9NS15 1303 aa19.14■□□□□ 0.65
VARS-228ENST00000495010 CAMTA2O94983 1202 aa19.13■□□□□ 0.65
VARS-228ENST00000495010 DZIP3Q86Y13 1208 aaKnown RBP19.13■□□□□ 0.65
VARS-228ENST00000495010 MASTLQ96GX5 879 aa19.13■□□□□ 0.65
VARS-228ENST00000495010 DDNO94850 711 aaPredicted RBP19.12■□□□□ 0.65
VARS-228ENST00000495010 PRPF40BQ6NWY9 871 aaKnown RBP19.12■□□□□ 0.65
VARS-228ENST00000495010 DICER1Q9UPY3 1922 aaKnown RBP19.12■□□□□ 0.65
VARS-228ENST00000495010 SRGNP10124 158 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 289.4 ms