RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 BTBD11A6QL63 1104 aa29.69■■■□□ 2.34
CDKN2A-206ENST00000494262 CANXP27824 592 aaKnown RBP29.69■■■□□ 2.34
CDKN2A-206ENST00000494262 TGFB2P61812 414 aa29.69■■■□□ 2.34
CDKN2A-206ENST00000494262 MCM10Q7L590 875 aa29.69■■■□□ 2.34
CDKN2A-206ENST00000494262 DDR1Q08345 913 aa29.68■■■□□ 2.34
CDKN2A-206ENST00000494262 FMNL2Q96PY5 1086 aa29.68■■■□□ 2.34
CDKN2A-206ENST00000494262 TEX13AQ9BXU3 409 aaPredicted RBP29.67■■■□□ 2.34
CDKN2A-206ENST00000494262 NARFQ9UHQ1 456 aa29.67■■■□□ 2.34
CDKN2A-206ENST00000494262 KIAA1551Q9HCM1 1747 aa29.66■■■□□ 2.34
CDKN2A-206ENST00000494262 A0A0G2JLW4 131 aa29.66■■■□□ 2.34
CDKN2A-206ENST00000494262 KCNQ3O43525 872 aa29.66■■■□□ 2.34
CDKN2A-206ENST00000494262 N4BP2Q86UW6 1770 aaPredicted RBP29.66■■■□□ 2.34
CDKN2A-206ENST00000494262 DDX10Q13206 875 aaKnown RBP29.65■■■□□ 2.34
CDKN2A-206ENST00000494262 NEFMP07197 916 aa29.64■■■□□ 2.34
CDKN2A-206ENST00000494262 TM4SF1P30408 202 aa29.64■■■□□ 2.34
CDKN2A-206ENST00000494262 DCTN1Q14203 1278 aa29.64■■■□□ 2.34
CDKN2A-206ENST00000494262 POLRMTO00411 1230 aaKnown RBP29.63■■■□□ 2.33
CDKN2A-206ENST00000494262 HTATSF1O43719 755 aaKnown RBP29.63■■■□□ 2.33
CDKN2A-206ENST00000494262 DPEP1P16444 411 aa29.63■■■□□ 2.33
CDKN2A-206ENST00000494262 EIF5P55010 431 aaKnown RBP29.62■■■□□ 2.33
CDKN2A-206ENST00000494262 RALBP1Q15311 655 aa29.62■■■□□ 2.33
CDKN2A-206ENST00000494262 A0A087WZG4 1122 aa29.6■■■□□ 2.33
CDKN2A-206ENST00000494262 BCS1LQ9Y276 419 aa29.6■■■□□ 2.33
CDKN2A-206ENST00000494262 NFIXQ14938 502 aa29.59■■■□□ 2.33
CDKN2A-206ENST00000494262 BCL2L12Q9HB09 334 aa29.59■■■□□ 2.33
CDKN2A-206ENST00000494262 ZNF330Q9Y3S2 320 aaPredicted RBP29.59■■■□□ 2.33
CDKN2A-206ENST00000494262 PLEKHF1Q96S99 279 aa29.58■■■□□ 2.33
CDKN2A-206ENST00000494262 A1BGP04217 495 aa29.57■■■□□ 2.32
CDKN2A-206ENST00000494262 IL6STP40189 918 aaPredicted RBP29.56■■■□□ 2.32
CDKN2A-206ENST00000494262 PNNQ9H307 717 aaKnown RBP29.56■■■□□ 2.32
CDKN2A-206ENST00000494262 KCNA3P22001 575 aa29.55■■■□□ 2.32
CDKN2A-206ENST00000494262 MAPK8IP3Q9UPT6 1336 aa29.54■■■□□ 2.32
CDKN2A-206ENST00000494262 TAF7Q15545 349 aaPredicted RBP29.54■■■□□ 2.32
CDKN2A-206ENST00000494262 NFE2L2Q16236 605 aa29.54■■■□□ 2.32
CDKN2A-206ENST00000494262 NPM2Q86SE8 214 aaKnown RBP29.54■■■□□ 2.32
CDKN2A-206ENST00000494262 TBC1D2BQ9UPU7 963 aa29.54■■■□□ 2.32
CDKN2A-206ENST00000494262 USP16Q9Y5T5 823 aa29.54■■■□□ 2.32
CDKN2A-206ENST00000494262 ATP10DQ9P241 1426 aa29.54■■■□□ 2.32
CDKN2A-206ENST00000494262 DLG5Q8TDM6 1919 aa29.53■■■□□ 2.32
CDKN2A-206ENST00000494262 PRAMEF22A3QJZ6 481 aa29.53■■■□□ 2.32
CDKN2A-206ENST00000494262 SNRPA1P09661 255 aaKnown RBP29.53■■■□□ 2.32
CDKN2A-206ENST00000494262 BRCA1P38398 1863 aaKnown RBP29.53■■■□□ 2.32
CDKN2A-206ENST00000494262 SERPINB2P05120 415 aa29.52■■■□□ 2.32
CDKN2A-206ENST00000494262 CHRNA5P30532 468 aa29.52■■■□□ 2.32
CDKN2A-206ENST00000494262 BICDL1Q6ZP65 573 aa29.52■■■□□ 2.32
CDKN2A-206ENST00000494262 PIM2Q9P1W9 311 aa29.52■■■□□ 2.32
CDKN2A-206ENST00000494262 AFDNP55196 1824 aaKnown RBP29.52■■■□□ 2.32
CDKN2A-206ENST00000494262 MIS18AQ9NYP9 233 aa29.51■■■□□ 2.31
CDKN2A-206ENST00000494262 MYBBP1AQ9BQG0 1328 aaKnown RBP29.5■■■□□ 2.31
CDKN2A-206ENST00000494262 ADCY9O60503 1353 aa29.5■■■□□ 2.31
CDKN2A-206ENST00000494262 SCN7AQ01118 1682 aa29.5■■■□□ 2.31
CDKN2A-206ENST00000494262 GIGYF1O75420 1035 aaPredicted RBP29.49■■■□□ 2.31
CDKN2A-206ENST00000494262 PIP4K2AP48426 406 aaPredicted RBP29.49■■■□□ 2.31
CDKN2A-206ENST00000494262 ARHGAP27Q6ZUM4 889 aa29.49■■■□□ 2.31
CDKN2A-206ENST00000494262 NRXN2Q9P2S2 1712 aa29.48■■■□□ 2.31
CDKN2A-206ENST00000494262 DALRD3Q5D0E6 543 aaKnown RBP29.48■■■□□ 2.31
CDKN2A-206ENST00000494262 TBC1D9BQ66K14 1250 aa29.48■■■□□ 2.31
CDKN2A-206ENST00000494262 PNISRQ8TF01 805 aaKnown RBP29.47■■■□□ 2.31
CDKN2A-206ENST00000494262 THUMPD2Q9BTF0 503 aaKnown RBP29.47■■■□□ 2.31
CDKN2A-206ENST00000494262 CAMTA2O94983 1202 aa29.46■■■□□ 2.31
CDKN2A-206ENST00000494262 DZIP3Q86Y13 1208 aaKnown RBP29.45■■■□□ 2.31
CDKN2A-206ENST00000494262 C1QTNF8P60827 252 aa29.44■■■□□ 2.3
CDKN2A-206ENST00000494262 ZNF526Q8TF50 670 aaPredicted RBP29.44■■■□□ 2.3
CDKN2A-206ENST00000494262 ARFGEF1Q9Y6D6 1849 aa29.43■■■□□ 2.3
CDKN2A-206ENST00000494262 GPBP1L1Q9HC44 474 aaPredicted RBP29.43■■■□□ 2.3
CDKN2A-206ENST00000494262 CARMIL3Q8ND23 1372 aa29.42■■■□□ 2.3
CDKN2A-206ENST00000494262 KDM3BQ7LBC6 1761 aa29.42■■■□□ 2.3
CDKN2A-206ENST00000494262 BCORQ6W2J9 1755 aa29.4■■■□□ 2.3
CDKN2A-206ENST00000494262 NBPF26B4DH59 902 aa29.4■■■□□ 2.3
CDKN2A-206ENST00000494262 RIPK4P57078 832 aa29.4■■■□□ 2.3
CDKN2A-206ENST00000494262 NBPF10Q6P3W6 841 aaKnown RBP29.4■■■□□ 2.3
CDKN2A-206ENST00000494262 C2CD5Q86YS7 1000 aa29.4■■■□□ 2.3
CDKN2A-206ENST00000494262 NBPF15Q8N660 670 aa29.4■■■□□ 2.3
CDKN2A-206ENST00000494262 SETDB2Q96T68 719 aa29.4■■■□□ 2.3
CDKN2A-206ENST00000494262 EIF4A1P60842 406 aaKnown RBP29.38■■■□□ 2.29
CDKN2A-206ENST00000494262 PRR5LQ6MZQ0 368 aa29.38■■■□□ 2.29
CDKN2A-206ENST00000494262 LAMB4A4D0S4 1761 aa29.37■■■□□ 2.29
CDKN2A-206ENST00000494262 H0YIN7 160 aa29.37■■■□□ 2.29
CDKN2A-206ENST00000494262 WDR43Q15061 677 aaKnown RBP eCLIP29.37■■■□□ 2.29
CDKN2A-206ENST00000494262 CCDC146Q8IYE0 955 aa29.37■■■□□ 2.29
CDKN2A-206ENST00000494262 TMPOP42166 694 aaKnown RBP29.36■■■□□ 2.29
CDKN2A-206ENST00000494262 CCDC24Q8N4L8 307 aa29.36■■■□□ 2.29
CDKN2A-206ENST00000494262 ZNF652Q9Y2D9 606 aa29.36■■■□□ 2.29
CDKN2A-206ENST00000494262 DLEC1Q9Y238 1755 aa29.35■■■□□ 2.29
CDKN2A-206ENST00000494262 NPHP1O15259 732 aa29.35■■■□□ 2.29
CDKN2A-206ENST00000494262 CLEC4GQ6UXB4 293 aa29.35■■■□□ 2.29
CDKN2A-206ENST00000494262 BRIP1Q9BX63 1249 aa29.35■■■□□ 2.29
CDKN2A-206ENST00000494262 PRKRIP1Q9H875 184 aaPredicted RBP29.35■■■□□ 2.29
CDKN2A-206ENST00000494262 LMOD3Q0VAK6 560 aa29.34■■■□□ 2.29
CDKN2A-206ENST00000494262 TTLL6Q8N841 843 aa29.34■■■□□ 2.29
CDKN2A-206ENST00000494262 CNBD1Q8NA66 436 aa29.34■■■□□ 2.29
CDKN2A-206ENST00000494262 TSPYL4Q9UJ04 414 aa29.34■■■□□ 2.29
CDKN2A-206ENST00000494262 PDE6BP35913 854 aa29.33■■■□□ 2.29
CDKN2A-206ENST00000494262 C9orf131Q5VYM1 1079 aa29.33■■■□□ 2.29
CDKN2A-206ENST00000494262 RRP7AQ9Y3A4 280 aaKnown RBP29.33■■■□□ 2.29
CDKN2A-206ENST00000494262 ANKRD31Q8N7Z5 1873 aa29.33■■■□□ 2.29
CDKN2A-206ENST00000494262 ST5P78524 1137 aa29.31■■■□□ 2.28
CDKN2A-206ENST00000494262 PDZRN3Q9UPQ7 1066 aa29.31■■■□□ 2.28
CDKN2A-206ENST00000494262 NEUROD2Q15784 382 aa29.3■■■□□ 2.28
CDKN2A-206ENST00000494262 NGEFQ8N5V2 710 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms