RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792	CAPN15	O75808	1086 aa		13.75	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	DCTN1	Q14203	1278 aa		13.75	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	CCDC146	Q8IYE0	955 aa		13.75	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	TTC5	Q8N0Z6	440 aa		13.75	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	ARHGEF1	Q92888	912 aa	Known RBP	13.75	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	UBR3	Q6ZT12	1888 aa		13.75	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	MRC1	P22897	1456 aa		13.74	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	GYS1	P13807	737 aa		13.74	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	RC3H1	Q5TC82	1133 aa	Known RBP	13.74	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	PLEKHF1	Q96S99	279 aa		13.74	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	C10orf71	Q711Q0	1435 aa		13.73	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	ADAMTS7	Q9UKP4	1686 aa		13.73	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	NFE2L2	Q16236	605 aa		13.73	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	TNS4	Q8IZW8	715 aa		13.73	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	RRAGC	Q9HB90	399 aa		13.73	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	RTCB	Q9Y3I0	505 aa	Known RBP	13.73	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	BTBD11	A6QL63	1104 aa		13.72	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	NEUROD2	Q15784	382 aa		13.72	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	CCDC87	Q9NVE4	849 aa		13.72	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	ADAMTS8	Q9UP79	889 aa		13.72	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	CNTNAP4	Q9C0A0	1308 aa		13.71	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	HTATSF1	O43719	755 aa	Known RBP	13.71	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	RPS6KA4	O75676	772 aa		13.71	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	ADRA2B	P18089	450 aa		13.71	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.71	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	RUNDC1	Q96C34	613 aa		13.71	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	MRS2	Q9HD23	443 aa		13.71	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	RRP7A	Q9Y3A4	280 aa	Known RBP	13.71	□□□□□ -0.21
TRAPPC12-222	ENST00000493792	CEMIP	Q8WUJ3	1361 aa		13.71	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	DLG5	Q8TDM6	1919 aa		13.7	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	KIAA1551	Q9HCM1	1747 aa		13.7	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	ZNF831	Q5JPB2	1677 aa		13.7	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	RIPK4	P57078	832 aa		13.7	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	CCDC184	Q52MB2	194 aa		13.7	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	THUMPD2	Q9BTF0	503 aa	Known RBP	13.7	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	PIM2	Q9P1W9	311 aa		13.7	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	ZNF790	Q6PG37	636 aa		13.69	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	DNAJC10	Q8IXB1	793 aa		13.69	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	PARP3	Q9Y6F1	533 aa		13.69	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	KDM2B	Q8NHM5	1336 aa		13.68	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	RFC4	P35249	363 aa		13.68	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	TMPO	P42166	694 aa	Known RBP	13.68	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	CRKL	P46109	303 aa	Known RBP	13.68	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	LMOD3	Q0VAK6	560 aa		13.68	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	DALRD3	Q5D0E6	543 aa	Known RBP	13.68	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	RNF181	Q9P0P0	153 aa		13.68	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	KIF13B	Q9NQT8	1826 aa		13.68	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	KCP	Q6ZWJ8	1503 aa		13.68	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	SIPA1L3	O60292	1781 aa	Predicted RBP	13.68	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	KCNQ3	O43525	872 aa		13.67	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	DDR1	Q08345	913 aa		13.67	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	TAF7	Q15545	349 aa	Predicted RBP	13.67	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	SMC1B	Q8NDV3	1235 aa		13.67	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	ZNF496	Q96IT1	587 aa	Predicted RBP	13.67	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	FMNL2	Q96PY5	1086 aa		13.67	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	MIS18A	Q9NYP9	233 aa		13.67	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	COL5A3	P25940	1745 aa	Predicted RBP	13.67	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	TJP1	Q07157	1748 aa		13.67	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	WDR90	Q96KV7	1748 aa		13.67	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.66	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	HSPA1A	P0DMV8	641 aa	Known RBP	13.66	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	HSPA1B	P0DMV9	641 aa	Known RBP	13.66	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	CHRNA5	P30532	468 aa		13.66	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	FKBP8	Q14318	412 aa		13.66	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	STARD3NL	O95772	234 aa		13.65	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	TM4SF1	P30408	202 aa		13.65	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	VSIG10	Q8N0Z9	540 aa		13.65	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	PNISR	Q8TF01	805 aa	Known RBP	13.65	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	SRP68	Q9UHB9	627 aa	Known RBP	13.65	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.65	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	LAS1L	Q9Y4W2	734 aa	Known RBP	13.65	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	HEG1	Q9ULI3	1381 aa		13.65	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	UBR2	Q8IWV8	1755 aa		13.65	□□□□□ -0.22
TRAPPC12-222	ENST00000493792	APAF1	O14727	1248 aa		13.64	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	CYP19A1	P11511	503 aa	Predicted RBP	13.64	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	CANX	P27824	592 aa	Known RBP	13.64	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	INTS5	Q6P9B9	1019 aa	Known RBP	13.64	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	POTEC	B2RU33	542 aa		13.63	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	VEGFA	P15692	232 aa	Predicted RBP	13.63	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.63	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	TSPYL4	Q9UJ04	414 aa		13.63	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	GLTPD2	A6NH11	291 aa		13.62	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	POLRMT	O00411	1230 aa	Known RBP	13.62	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	NPM2	Q86SE8	214 aa	Known RBP	13.62	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	FAM9B	Q8IZU0	186 aa		13.62	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	ZBTB1	Q9Y2K1	713 aa		13.62	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	USP42	Q9H9J4	1324 aa	Known RBP	13.62	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	MYH14	Q7Z406	1995 aa	Known RBP	13.62	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	C4A	P0C0L4	1744 aa		13.61	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	SNRPA1	P09661	255 aa	Known RBP	13.61	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	RASSF7	Q02833	373 aa		13.61	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.61	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	PRAMEF22	A3QJZ6	481 aa		13.6	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	A1BG	P04217	495 aa		13.6	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	TRIM35	Q9UPQ4	493 aa		13.6	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	USP16	Q9Y5T5	823 aa		13.6	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	BRCA1	P38398	1863 aa	Known RBP	13.59	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	ZPR1	O75312	459 aa		13.59	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	LMNB1	P20700	586 aa		13.59	□□□□□ -0.23
TRAPPC12-222	ENST00000493792	PIP4K2A	P48426	406 aa	Predicted RBP	13.59	□□□□□ -0.23

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