RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 ZNF831Q5JPB2 1677 aa9.78□□□□□ -0.84
VEGFA-214ENST00000493786 PRAMEF22A3QJZ6 481 aa9.78□□□□□ -0.84
VEGFA-214ENST00000493786 GNPATO15228 680 aa9.78□□□□□ -0.84
VEGFA-214ENST00000493786 KRT24Q2M2I5 525 aa9.78□□□□□ -0.84
VEGFA-214ENST00000493786 RC3H1Q5TC82 1133 aaKnown RBP9.78□□□□□ -0.84
VEGFA-214ENST00000493786 CCDC30Q5VVM6 783 aa9.78□□□□□ -0.84
VEGFA-214ENST00000493786 C8orf58Q8NAV2 365 aa9.78□□□□□ -0.84
VEGFA-214ENST00000493786 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
VEGFA-214ENST00000493786 STK31Q9BXU1 1019 aa9.78□□□□□ -0.84
VEGFA-214ENST00000493786 RTCBQ9Y3I0 505 aaKnown RBP9.78□□□□□ -0.84
VEGFA-214ENST00000493786 ZNF330Q9Y3S2 320 aaPredicted RBP9.78□□□□□ -0.84
VEGFA-214ENST00000493786 USP16Q9Y5T5 823 aa9.78□□□□□ -0.84
VEGFA-214ENST00000493786 ERBB4Q15303 1308 aa9.78□□□□□ -0.84
VEGFA-214ENST00000493786 CT47B1P0C2W7 299 aaPredicted RBP9.77□□□□□ -0.85
VEGFA-214ENST00000493786 CANXP27824 592 aaKnown RBP9.77□□□□□ -0.85
VEGFA-214ENST00000493786 TSPYL6Q8N831 410 aa9.77□□□□□ -0.85
VEGFA-214ENST00000493786 FLAD1Q8NFF5 587 aa9.77□□□□□ -0.85
VEGFA-214ENST00000493786 C5P01031 1676 aa9.77□□□□□ -0.85
VEGFA-214ENST00000493786 RREB1Q92766 1687 aa9.77□□□□□ -0.85
VEGFA-214ENST00000493786 C4BP0C0L5 1744 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 CICQ96RK0 1608 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-214ENST00000493786 A0A087WZG4 1122 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 MSH5O43196 834 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 RPS6KA4O75676 772 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 PHF14O94880 888 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 MYL6BP14649 208 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 SLC15A2Q16348 729 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 ZNF827Q17R98 1081 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 TRMT2AQ8IZ69 625 aaKnown RBP9.76□□□□□ -0.85
VEGFA-214ENST00000493786 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 ZNF428Q96B54 188 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 ARXQ96QS3 562 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 DBF4Q9UBU7 674 aaPredicted RBP9.76□□□□□ -0.85
VEGFA-214ENST00000493786 ZBTB1Q9Y2K1 713 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 TJP1Q07157 1748 aa9.76□□□□□ -0.85
VEGFA-214ENST00000493786 LAMB4A4D0S4 1761 aa9.75□□□□□ -0.85
VEGFA-214ENST00000493786 A1BGP04217 495 aa9.75□□□□□ -0.85
VEGFA-214ENST00000493786 ADRA2BP18089 450 aa9.75□□□□□ -0.85
VEGFA-214ENST00000493786 SSFA2P28290 1259 aa9.75□□□□□ -0.85
VEGFA-214ENST00000493786 IL6STP40189 918 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-214ENST00000493786 TRAPPC3LQ5T215 181 aa9.75□□□□□ -0.85
VEGFA-214ENST00000493786 INTS5Q6P9B9 1019 aaKnown RBP9.75□□□□□ -0.85
VEGFA-214ENST00000493786 ANO8Q9HCE9 1232 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-214ENST00000493786 DDX21Q9NR30 783 aaKnown RBP eCLIP9.75□□□□□ -0.85
VEGFA-214ENST00000493786 HYPKQ9NX55 129 aa9.75□□□□□ -0.85
VEGFA-214ENST00000493786 NUP188Q5SRE5 1749 aa9.75□□□□□ -0.85
VEGFA-214ENST00000493786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.74□□□□□ -0.85
VEGFA-214ENST00000493786 ZPR1O75312 459 aa9.74□□□□□ -0.85
VEGFA-214ENST00000493786 VAMP4O75379 141 aa9.74□□□□□ -0.85
VEGFA-214ENST00000493786 RFC4P35249 363 aa9.74□□□□□ -0.85
VEGFA-214ENST00000493786 PIP4K2AP48426 406 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-214ENST00000493786 KIF6Q6ZMV9 814 aa9.74□□□□□ -0.85
VEGFA-214ENST00000493786 CHPF2Q9P2E5 772 aa9.74□□□□□ -0.85
VEGFA-214ENST00000493786 COL15A1P39059 1388 aa9.74□□□□□ -0.85
VEGFA-214ENST00000493786 COL5A3P25940 1745 aaPredicted RBP9.73□□□□□ -0.85
VEGFA-214ENST00000493786 TAF1LQ8IZX4 1826 aa9.73□□□□□ -0.85
VEGFA-214ENST00000493786 SLC4A2P04920 1241 aa9.73□□□□□ -0.85
VEGFA-214ENST00000493786 R3HDM1Q15032 1099 aaKnown RBP9.73□□□□□ -0.85
VEGFA-214ENST00000493786 SMC4Q9NTJ3 1288 aa9.73□□□□□ -0.85
VEGFA-214ENST00000493786 NBPF26B4DH59 902 aa9.72□□□□□ -0.85
VEGFA-214ENST00000493786 TCERG1O14776 1098 aaKnown RBP9.72□□□□□ -0.85
VEGFA-214ENST00000493786 DDX58O95786 925 aaKnown RBP9.72□□□□□ -0.85
VEGFA-214ENST00000493786 EIF5P55010 431 aaKnown RBP9.72□□□□□ -0.85
VEGFA-214ENST00000493786 AIMP1Q12904 312 aaKnown RBP9.72□□□□□ -0.85
VEGFA-214ENST00000493786 ALDH1L2Q3SY69 923 aa9.72□□□□□ -0.85
VEGFA-214ENST00000493786 NBPF10Q6P3W6 841 aaKnown RBP9.72□□□□□ -0.85
VEGFA-214ENST00000493786 DZIP3Q86Y13 1208 aaKnown RBP9.72□□□□□ -0.85
VEGFA-214ENST00000493786 NBPF15Q8N660 670 aa9.72□□□□□ -0.85
VEGFA-214ENST00000493786 PNPLA7Q6ZV29 1317 aa9.72□□□□□ -0.85
VEGFA-214ENST00000493786 PSDA5PKW4 1024 aaPredicted RBP9.71□□□□□ -0.86
VEGFA-214ENST00000493786 ANXA1P04083 346 aa9.71□□□□□ -0.86
VEGFA-214ENST00000493786 PDIA6Q15084 440 aa9.71□□□□□ -0.86
VEGFA-214ENST00000493786 PROSER3Q2NL68 480 aa9.71□□□□□ -0.86
VEGFA-214ENST00000493786 XAGE3Q8WTP9 111 aa9.71□□□□□ -0.86
VEGFA-214ENST00000493786 ARHGEF1Q92888 912 aaKnown RBP9.71□□□□□ -0.86
VEGFA-214ENST00000493786 TBC1D2BQ9UPU7 963 aa9.71□□□□□ -0.86
VEGFA-214ENST00000493786 ZNF652Q9Y2D9 606 aa9.71□□□□□ -0.86
VEGFA-214ENST00000493786 RARSP54136 660 aaKnown RBP9.7□□□□□ -0.86
VEGFA-214ENST00000493786 FLIIQ13045 1269 aa9.7□□□□□ -0.86
VEGFA-214ENST00000493786 FKBP5Q13451 457 aaPredicted RBP9.7□□□□□ -0.86
VEGFA-214ENST00000493786 COPS6Q7L5N1 327 aa9.7□□□□□ -0.86
VEGFA-214ENST00000493786 COL23A1Q86Y22 540 aaPredicted RBP9.7□□□□□ -0.86
VEGFA-214ENST00000493786 SLC16A10Q8TF71 515 aa9.7□□□□□ -0.86
VEGFA-214ENST00000493786 SSH1Q8WYL5 1049 aa9.7□□□□□ -0.86
VEGFA-214ENST00000493786 BCL2L13Q9BXK5 485 aa9.7□□□□□ -0.86
VEGFA-214ENST00000493786 NARFQ9UHQ1 456 aa9.7□□□□□ -0.86
VEGFA-214ENST00000493786 KIF16BQ96L93 1317 aa9.7□□□□□ -0.86
VEGFA-214ENST00000493786 USP42Q9H9J4 1324 aaKnown RBP9.7□□□□□ -0.86
VEGFA-214ENST00000493786 USPL1Q5W0Q7 1092 aa9.69□□□□□ -0.86
VEGFA-214ENST00000493786 MAP3K15Q6ZN16 1313 aa9.69□□□□□ -0.86
VEGFA-214ENST00000493786 SMIM5Q71RC9 77 aa9.69□□□□□ -0.86
VEGFA-214ENST00000493786 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
VEGFA-214ENST00000493786 AMIGO3Q86WK7 504 aa9.69□□□□□ -0.86
VEGFA-214ENST00000493786 ZBTB3Q9H5J0 574 aa9.69□□□□□ -0.86
VEGFA-214ENST00000493786 PHAXQ9H814 394 aaKnown RBP9.69□□□□□ -0.86
VEGFA-214ENST00000493786 RCAN3Q9UKA8 241 aa9.69□□□□□ -0.86
VEGFA-214ENST00000493786 MYH14Q7Z406 1995 aaKnown RBP9.68□□□□□ -0.86
VEGFA-214ENST00000493786 UBR3Q6ZT12 1888 aa9.68□□□□□ -0.86
VEGFA-214ENST00000493786 PTPRCP08575 1304 aa9.68□□□□□ -0.86
VEGFA-214ENST00000493786 ERVV-1B6SEH8 477 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms