RNA–Protein interactions for RNA: ENST00000493082.5

BRD9-210, Transcript of bromodomain containing 9, humanhuman

TSL 5

Gene BRD9, Length 750 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-210ENST00000493082 AMIGO3Q86WK7 504 aa17.1■□□□□ 0.33
BRD9-210ENST00000493082 CACNA1FO60840 1977 aa17.09■□□□□ 0.33
BRD9-210ENST00000493082 EXOSC9Q06265 439 aaKnown RBP17.09■□□□□ 0.33
BRD9-210ENST00000493082 NECTIN2Q92692 538 aa17.09■□□□□ 0.33
BRD9-210ENST00000493082 SNRPA1P09661 255 aaKnown RBP17.08■□□□□ 0.32
BRD9-210ENST00000493082 CYP19A1P11511 503 aaPredicted RBP17.08■□□□□ 0.32
BRD9-210ENST00000493082 DUSP27Q5VZP5 1158 aa17.08■□□□□ 0.32
BRD9-210ENST00000493082 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.32
BRD9-210ENST00000493082 CASZ1Q86V15 1759 aa17.07■□□□□ 0.32
BRD9-210ENST00000493082 E9PSI1 815 aa17.07■□□□□ 0.32
BRD9-210ENST00000493082 A1BGP04217 495 aa17.07■□□□□ 0.32
BRD9-210ENST00000493082 CRKLP46109 303 aaKnown RBP17.07■□□□□ 0.32
BRD9-210ENST00000493082 TRMT2AQ8IZ69 625 aaKnown RBP17.07■□□□□ 0.32
BRD9-210ENST00000493082 AKT1S1Q96B36 256 aa17.07■□□□□ 0.32
BRD9-210ENST00000493082 EIF2S2P20042 333 aaKnown RBP17.06■□□□□ 0.32
BRD9-210ENST00000493082 INTS5Q6P9B9 1019 aaKnown RBP17.06■□□□□ 0.32
BRD9-210ENST00000493082 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
BRD9-210ENST00000493082 ZBTB1Q9Y2K1 713 aa17.06■□□□□ 0.32
BRD9-210ENST00000493082 BCORQ6W2J9 1755 aa17.06■□□□□ 0.32
BRD9-210ENST00000493082 CNTNAP4Q9C0A0 1308 aa17.05■□□□□ 0.32
BRD9-210ENST00000493082 TCERG1O14776 1098 aaKnown RBP17.05■□□□□ 0.32
BRD9-210ENST00000493082 ANXA1P04083 346 aa17.04■□□□□ 0.32
BRD9-210ENST00000493082 CCDC87Q9NVE4 849 aa17.04■□□□□ 0.32
BRD9-210ENST00000493082 NUP98P52948 1817 aa17.04■□□□□ 0.32
BRD9-210ENST00000493082 NBPF26B4DH59 902 aa17.03■□□□□ 0.32
BRD9-210ENST00000493082 GNPATO15228 680 aa17.03■□□□□ 0.32
BRD9-210ENST00000493082 CANXP27824 592 aaKnown RBP17.03■□□□□ 0.32
BRD9-210ENST00000493082 PROSER3Q2NL68 480 aa17.03■□□□□ 0.32
BRD9-210ENST00000493082 TWISTNBQ3B726 338 aaPredicted RBP17.03■□□□□ 0.32
BRD9-210ENST00000493082 NBPF14Q5TI25 921 aa17.03■□□□□ 0.32
BRD9-210ENST00000493082 NBPF10Q6P3W6 841 aaKnown RBP17.03■□□□□ 0.32
BRD9-210ENST00000493082 NBPF15Q8N660 670 aa17.03■□□□□ 0.32
BRD9-210ENST00000493082 AK7Q96M32 723 aa17.03■□□□□ 0.32
BRD9-210ENST00000493082 PDGFDQ9GZP0 370 aaPredicted RBP17.03■□□□□ 0.32
BRD9-210ENST00000493082 SCN7AQ01118 1682 aa17.03■□□□□ 0.32
BRD9-210ENST00000493082 PSDA5PKW4 1024 aaPredicted RBP17.02■□□□□ 0.32
BRD9-210ENST00000493082 PHF14O94880 888 aa17.02■□□□□ 0.32
BRD9-210ENST00000493082 SLC15A2Q16348 729 aa17.02■□□□□ 0.32
BRD9-210ENST00000493082 STK32BQ9NY57 414 aa17.02■□□□□ 0.32
BRD9-210ENST00000493082 VAMP4O75379 141 aa17.01■□□□□ 0.31
BRD9-210ENST00000493082 STARD3NLO95772 234 aa17.01■□□□□ 0.31
BRD9-210ENST00000493082 R3HDM1Q15032 1099 aaKnown RBP17.01■□□□□ 0.31
BRD9-210ENST00000493082 HDGFL1Q5TGJ6 251 aa17.01■□□□□ 0.31
BRD9-210ENST00000493082 TEX13AQ9BXU3 409 aaPredicted RBP17.01■□□□□ 0.31
BRD9-210ENST00000493082 ARFGEF2Q9Y6D5 1785 aa17.01■□□□□ 0.31
BRD9-210ENST00000493082 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
BRD9-210ENST00000493082 PNPLA7Q6ZV29 1317 aa17■□□□□ 0.31
BRD9-210ENST00000493082 PDIA6Q15084 440 aa17■□□□□ 0.31
BRD9-210ENST00000493082 RC3H1Q5TC82 1133 aaKnown RBP17■□□□□ 0.31
BRD9-210ENST00000493082 CHPF2Q9P2E5 772 aa17■□□□□ 0.31
BRD9-210ENST00000493082 ZNF330Q9Y3S2 320 aaPredicted RBP17■□□□□ 0.31
BRD9-210ENST00000493082 ANKRD36CQ5JPF3 1778 aa17■□□□□ 0.31
BRD9-210ENST00000493082 RPS6KA4O75676 772 aa16.99■□□□□ 0.31
BRD9-210ENST00000493082 HOXB7P09629 217 aa16.99■□□□□ 0.31
BRD9-210ENST00000493082 MYL6BP14649 208 aa16.99■□□□□ 0.31
BRD9-210ENST00000493082 TFCP2L1Q9NZI6 479 aa16.99■□□□□ 0.31
BRD9-210ENST00000493082 COL15A1P39059 1388 aa16.99■□□□□ 0.31
BRD9-210ENST00000493082 LRP10Q7Z4F1 713 aa16.98■□□□□ 0.31
BRD9-210ENST00000493082 COL23A1Q86Y22 540 aaPredicted RBP16.98■□□□□ 0.31
BRD9-210ENST00000493082 COL24A1Q17RW2 1714 aa16.97■□□□□ 0.31
BRD9-210ENST00000493082 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.97■□□□□ 0.31
BRD9-210ENST00000493082 EIF5P55010 431 aaKnown RBP16.97■□□□□ 0.31
BRD9-210ENST00000493082 RTCBQ9Y3I0 505 aaKnown RBP16.97■□□□□ 0.31
BRD9-210ENST00000493082 AFDNP55196 1824 aaKnown RBP16.97■□□□□ 0.31
BRD9-210ENST00000493082 ARHGEF1Q92888 912 aaKnown RBP16.96■□□□□ 0.31
BRD9-210ENST00000493082 SRP68Q9UHB9 627 aaKnown RBP16.96■□□□□ 0.31
BRD9-210ENST00000493082 TTLL7Q6ZT98 887 aa16.95■□□□□ 0.3
BRD9-210ENST00000493082 G2E3Q7L622 706 aa16.95■□□□□ 0.3
BRD9-210ENST00000493082 BCL2L13Q9BXK5 485 aa16.95■□□□□ 0.3
BRD9-210ENST00000493082 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
BRD9-210ENST00000493082 TBC1D2BQ9UPU7 963 aa16.95■□□□□ 0.3
BRD9-210ENST00000493082 MSH5O43196 834 aa16.94■□□□□ 0.3
BRD9-210ENST00000493082 SSFA2P28290 1259 aa16.94■□□□□ 0.3
BRD9-210ENST00000493082 IL6STP40189 918 aaPredicted RBP16.94■□□□□ 0.3
BRD9-210ENST00000493082 CCDC30Q5VVM6 783 aa16.94■□□□□ 0.3
BRD9-210ENST00000493082 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
BRD9-210ENST00000493082 ERBB4Q15303 1308 aa16.94■□□□□ 0.3
BRD9-210ENST00000493082 AIMP1Q12904 312 aaKnown RBP16.93■□□□□ 0.3
BRD9-210ENST00000493082 TRAPPC3LQ5T215 181 aa16.93■□□□□ 0.3
BRD9-210ENST00000493082 XAGE3Q8WTP9 111 aa16.93■□□□□ 0.3
BRD9-210ENST00000493082 ARXQ96QS3 562 aa16.93■□□□□ 0.3
BRD9-210ENST00000493082 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
BRD9-210ENST00000493082 DBF4Q9UBU7 674 aaPredicted RBP16.92■□□□□ 0.3
BRD9-210ENST00000493082 USPL1Q5W0Q7 1092 aa16.91■□□□□ 0.3
BRD9-210ENST00000493082 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
BRD9-210ENST00000493082 COPS6Q7L5N1 327 aa16.91■□□□□ 0.3
BRD9-210ENST00000493082 DZIP3Q86Y13 1208 aaKnown RBP16.91■□□□□ 0.3
BRD9-210ENST00000493082 BCL2L12Q9HB09 334 aa16.91■□□□□ 0.3
BRD9-210ENST00000493082 USP42Q9H9J4 1324 aaKnown RBP16.91■□□□□ 0.3
BRD9-210ENST00000493082 N4BP2Q86UW6 1770 aaPredicted RBP16.9■□□□□ 0.3
BRD9-210ENST00000493082 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
BRD9-210ENST00000493082 RFC4P35249 363 aa16.9■□□□□ 0.3
BRD9-210ENST00000493082 MRPL50Q8N5N7 158 aaKnown RBP16.9■□□□□ 0.3
BRD9-210ENST00000493082 STK31Q9BXU1 1019 aa16.9■□□□□ 0.3
BRD9-210ENST00000493082 CAMTA2O94983 1202 aa16.89■□□□□ 0.29
BRD9-210ENST00000493082 ZBTB7AO95365 584 aa16.89■□□□□ 0.29
BRD9-210ENST00000493082 ADRA2BP18089 450 aa16.89■□□□□ 0.29
BRD9-210ENST00000493082 RARSP54136 660 aaKnown RBP16.89■□□□□ 0.29
BRD9-210ENST00000493082 HLFQ16534 295 aa16.89■□□□□ 0.29
BRD9-210ENST00000493082 ZBTB3Q9H5J0 574 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms