RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 GOLGA6L3A6NEY3 463 aa15.26■□□□□ 0.03
HMGN1-220ENST00000492280 REC8O95072 547 aa15.26■□□□□ 0.03
HMGN1-220ENST00000492280 NEK4P51957 841 aa15.26■□□□□ 0.03
HMGN1-220ENST00000492280 JARID2Q92833 1246 aaPredicted RBP15.26■□□□□ 0.03
HMGN1-220ENST00000492280 ESYT1Q9BSJ8 1104 aa15.26■□□□□ 0.03
HMGN1-220ENST00000492280 OSBPL3Q9H4L5 887 aa15.26■□□□□ 0.03
HMGN1-220ENST00000492280 DDX11L8A8MPP1 907 aa15.25■□□□□ 0.03
HMGN1-220ENST00000492280 MED1Q15648 1581 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-220ENST00000492280 TUBGCP6Q96RT7 1819 aa15.25■□□□□ 0.03
HMGN1-220ENST00000492280 CHMLP26374 656 aa15.25■□□□□ 0.03
HMGN1-220ENST00000492280 MYL6BP14649 208 aa15.24■□□□□ 0.03
HMGN1-220ENST00000492280 OS9Q13438 667 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-220ENST00000492280 FOXD4L6Q3SYB3 417 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-220ENST00000492280 FOXD4L3Q6VB84 417 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-220ENST00000492280 RHPN1Q8TCX5 695 aa15.24■□□□□ 0.03
HMGN1-220ENST00000492280 SSH3Q8TE77 659 aa15.24■□□□□ 0.03
HMGN1-220ENST00000492280 LARP6Q9BRS8 491 aaKnown RBP15.24■□□□□ 0.03
HMGN1-220ENST00000492280 GAS2L3Q86XJ1 694 aa15.24■□□□□ 0.03
HMGN1-220ENST00000492280 GBP4Q96PP9 640 aa15.24■□□□□ 0.03
HMGN1-220ENST00000492280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-220ENST00000492280 ADAMTSL3P82987 1691 aa15.23■□□□□ 0.03
HMGN1-220ENST00000492280 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-220ENST00000492280 MCTP1Q6DN14 999 aa15.23■□□□□ 0.03
HMGN1-220ENST00000492280 LMO7Q8WWI1 1683 aa15.23■□□□□ 0.03
HMGN1-220ENST00000492280 CIZ1Q9ULV3 898 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-220ENST00000492280 ERBB3P21860 1342 aa15.22■□□□□ 0.03
HMGN1-220ENST00000492280 ST18O60284 1047 aa15.22■□□□□ 0.03
HMGN1-220ENST00000492280 BAG4O95429 457 aaKnown RBP15.22■□□□□ 0.03
HMGN1-220ENST00000492280 HSPA2P54652 639 aa15.22■□□□□ 0.03
HMGN1-220ENST00000492280 KLHDC4Q8TBB5 520 aa15.22■□□□□ 0.03
HMGN1-220ENST00000492280 C9orf78Q9NZ63 289 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-220ENST00000492280 CSB-PGBD3P0DP91 1061 aa15.22■□□□□ 0.03
HMGN1-220ENST00000492280 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-220ENST00000492280 C1orf167Q5SNV9 1468 aa15.22■□□□□ 0.03
HMGN1-220ENST00000492280 N4BP2Q86UW6 1770 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-220ENST00000492280 PXDNLA1KZ92 1463 aa15.21■□□□□ 0.03
HMGN1-220ENST00000492280 SIL1Q9H173 461 aa15.21■□□□□ 0.03
HMGN1-220ENST00000492280 FSD2A1L4K1 749 aa15.21■□□□□ 0.02
HMGN1-220ENST00000492280 NCLP19338 710 aaKnown RBP15.21■□□□□ 0.02
HMGN1-220ENST00000492280 POLA2Q14181 598 aa15.21■□□□□ 0.02
HMGN1-220ENST00000492280 PI4K2BQ8TCG2 481 aa15.21■□□□□ 0.02
HMGN1-220ENST00000492280 DDX54Q8TDD1 881 aaKnown RBP15.21■□□□□ 0.02
HMGN1-220ENST00000492280 BABAM1Q9NWV8 329 aa15.21■□□□□ 0.02
HMGN1-220ENST00000492280 DBF4Q9UBU7 674 aaPredicted RBP15.21■□□□□ 0.02
HMGN1-220ENST00000492280 TPRNQ4KMQ1 711 aa15.2■□□□□ 0.02
HMGN1-220ENST00000492280 NFATC2IPQ8NCF5 419 aa15.2■□□□□ 0.02
HMGN1-220ENST00000492280 SPG7Q9UQ90 795 aa15.2■□□□□ 0.02
HMGN1-220ENST00000492280 ZDHHC9Q9Y397 364 aa15.2■□□□□ 0.02
HMGN1-220ENST00000492280 TRPM3Q9HCF6 1732 aaPredicted RBP15.2■□□□□ 0.02
HMGN1-220ENST00000492280 CPA1P15085 419 aa15.19■□□□□ 0.02
HMGN1-220ENST00000492280 AMOTQ4VCS5 1084 aa15.19■□□□□ 0.02
HMGN1-220ENST00000492280 CWC27Q6UX04 472 aaKnown RBP15.19■□□□□ 0.02
HMGN1-220ENST00000492280 TMX3Q96JJ7 454 aa15.19■□□□□ 0.02
HMGN1-220ENST00000492280 C19orf44Q9H6X5 657 aa15.19■□□□□ 0.02
HMGN1-220ENST00000492280 SLIT3O75094 1523 aa15.19■□□□□ 0.02
HMGN1-220ENST00000492280 TMEM94Q12767 1356 aa15.19■□□□□ 0.02
HMGN1-220ENST00000492280 L1TD1Q5T7N2 865 aaKnown RBP15.18■□□□□ 0.02
HMGN1-220ENST00000492280 RAPGEF4Q8WZA2 1011 aa15.18■□□□□ 0.02
HMGN1-220ENST00000492280 SUCLG2Q96I99 432 aa15.18■□□□□ 0.02
HMGN1-220ENST00000492280 DDX49Q9Y6V7 483 aaKnown RBP15.18■□□□□ 0.02
HMGN1-220ENST00000492280 MEGF6O75095 1541 aa15.18■□□□□ 0.02
HMGN1-220ENST00000492280 ATF3P18847 181 aa15.18■□□□□ 0.02
HMGN1-220ENST00000492280 STAP2Q9UGK3 403 aa15.18■□□□□ 0.02
HMGN1-220ENST00000492280 KIF1BPQ96EK5 621 aa15.17■□□□□ 0.02
HMGN1-220ENST00000492280 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
HMGN1-220ENST00000492280 BICC1Q9H694 974 aaKnown RBP15.17■□□□□ 0.02
HMGN1-220ENST00000492280 KAZALD1Q96I82 304 aa15.16■□□□□ 0.02
HMGN1-220ENST00000492280 ZNF496Q96IT1 587 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-220ENST00000492280 GRPEL1Q9HAV7 217 aa15.16■□□□□ 0.02
HMGN1-220ENST00000492280 RRAGDQ9NQL2 400 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-220ENST00000492280 TLR7Q9NYK1 1049 aaKnown RBP15.16■□□□□ 0.02
HMGN1-220ENST00000492280 RBM27Q9P2N5 1060 aaKnown RBP15.16■□□□□ 0.02
HMGN1-220ENST00000492280 HOXB7P09629 217 aa15.16■□□□□ 0.02
HMGN1-220ENST00000492280 PDIA6Q15084 440 aa15.16■□□□□ 0.02
HMGN1-220ENST00000492280 KSR2Q6VAB6 950 aa15.16■□□□□ 0.02
HMGN1-220ENST00000492280 ZNF790Q6PG37 636 aa15.16■□□□□ 0.02
HMGN1-220ENST00000492280 CCDC8Q9H0W5 538 aaPredicted RBP15.16■□□□□ 0.02
HMGN1-220ENST00000492280 USP16Q9Y5T5 823 aa15.16■□□□□ 0.02
HMGN1-220ENST00000492280 PHRF1Q9P1Y6 1649 aaKnown RBP15.15■□□□□ 0.02
HMGN1-220ENST00000492280 C5P01031 1676 aa15.15■□□□□ 0.02
HMGN1-220ENST00000492280 NPHP3Q7Z494 1330 aa15.15■□□□□ 0.02
HMGN1-220ENST00000492280 CAVIN1Q6NZI2 390 aaKnown RBP15.15■□□□□ 0.02
HMGN1-220ENST00000492280 RIC3Q7Z5B4 369 aa15.15■□□□□ 0.02
HMGN1-220ENST00000492280 RASEFQ8IZ41 740 aa15.15■□□□□ 0.02
HMGN1-220ENST00000492280 XAGE3Q8WTP9 111 aa15.15■□□□□ 0.02
HMGN1-220ENST00000492280 STRCP1A6NGW2 1772 aa15.15■□□□□ 0.02
HMGN1-220ENST00000492280 PRPF40AO75400 957 aaKnown RBP15.15■□□□□ 0.02
HMGN1-220ENST00000492280 CYP2E1P05181 493 aaPredicted RBP15.15■□□□□ 0.02
HMGN1-220ENST00000492280 IGKV5-2P06315 115 aa15.15■□□□□ 0.02
HMGN1-220ENST00000492280 CCDC9Q9Y3X0 531 aaKnown RBP15.15■□□□□ 0.02
HMGN1-220ENST00000492280 NDUFB9Q9Y6M9 179 aa15.15■□□□□ 0.02
HMGN1-220ENST00000492280 COL9A3Q14050 684 aaPredicted RBP15.14■□□□□ 0.01
HMGN1-220ENST00000492280 EPHA10Q5JZY3 1008 aa15.14■□□□□ 0.01
HMGN1-220ENST00000492280 AACSQ86V21 672 aa15.14■□□□□ 0.01
HMGN1-220ENST00000492280 NSFL1CQ9UNZ2 370 aaKnown RBP15.14■□□□□ 0.01
HMGN1-220ENST00000492280 CYP27B1O15528 508 aa15.14■□□□□ 0.01
HMGN1-220ENST00000492280 COPS6Q7L5N1 327 aa15.14■□□□□ 0.01
HMGN1-220ENST00000492280 MYD88Q99836 296 aa15.14■□□□□ 0.01
HMGN1-220ENST00000492280 RAB11FIP3O75154 756 aa15.13■□□□□ 0.01
HMGN1-220ENST00000492280 PHKG2P15735 406 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms