RNA–Protein interactions for RNA: ENST00000491464.1

HDAC7-225, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-225ENST00000491464 CEMIPQ8WUJ3 1361 aa12.99□□□□□ -0.33
HDAC7-225ENST00000491464 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
HDAC7-225ENST00000491464 USPL1Q5W0Q7 1092 aa12.99□□□□□ -0.33
HDAC7-225ENST00000491464 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
HDAC7-225ENST00000491464 ZNF496Q96IT1 587 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-225ENST00000491464 FMNL2Q96PY5 1086 aa12.99□□□□□ -0.33
HDAC7-225ENST00000491464 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
HDAC7-225ENST00000491464 A0A087WZG4 1122 aa12.98□□□□□ -0.33
HDAC7-225ENST00000491464 A0A0G2JLW4 131 aa12.98□□□□□ -0.33
HDAC7-225ENST00000491464 BTBD11A6QL63 1104 aa12.98□□□□□ -0.33
HDAC7-225ENST00000491464 CANXP27824 592 aaKnown RBP12.98□□□□□ -0.33
HDAC7-225ENST00000491464 NARFQ9UHQ1 456 aa12.98□□□□□ -0.33
HDAC7-225ENST00000491464 BCS1LQ9Y276 419 aa12.98□□□□□ -0.33
HDAC7-225ENST00000491464 GIGYF1O75420 1035 aaPredicted RBP12.97□□□□□ -0.33
HDAC7-225ENST00000491464 DPEP1P16444 411 aa12.97□□□□□ -0.33
HDAC7-225ENST00000491464 DDR1Q08345 913 aa12.97□□□□□ -0.33
HDAC7-225ENST00000491464 ATP10DQ9P241 1426 aa12.96□□□□□ -0.33
HDAC7-225ENST00000491464 POLRMTO00411 1230 aaKnown RBP12.96□□□□□ -0.33
HDAC7-225ENST00000491464 MCM10Q7L590 875 aa12.96□□□□□ -0.33
HDAC7-225ENST00000491464 ZNF330Q9Y3S2 320 aaPredicted RBP12.96□□□□□ -0.33
HDAC7-225ENST00000491464 BRCA1P38398 1863 aaKnown RBP12.95□□□□□ -0.34
HDAC7-225ENST00000491464 HTATSF1O43719 755 aaKnown RBP12.95□□□□□ -0.34
HDAC7-225ENST00000491464 TM4SF1P30408 202 aa12.95□□□□□ -0.34
HDAC7-225ENST00000491464 EIF5P55010 431 aaKnown RBP12.95□□□□□ -0.34
HDAC7-225ENST00000491464 PNNQ9H307 717 aaKnown RBP12.95□□□□□ -0.34
HDAC7-225ENST00000491464 AFDNP55196 1824 aaKnown RBP12.95□□□□□ -0.34
HDAC7-225ENST00000491464 C1QTNF8P60827 252 aa12.94□□□□□ -0.34
HDAC7-225ENST00000491464 NFIXQ14938 502 aa12.94□□□□□ -0.34
HDAC7-225ENST00000491464 GPBP1L1Q9HC44 474 aaPredicted RBP12.94□□□□□ -0.34
HDAC7-225ENST00000491464 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
HDAC7-225ENST00000491464 ARFGEF1Q9Y6D6 1849 aa12.94□□□□□ -0.34
HDAC7-225ENST00000491464 MAPK8IP3Q9UPT6 1336 aa12.93□□□□□ -0.34
HDAC7-225ENST00000491464 KCNQ3O43525 872 aa12.93□□□□□ -0.34
HDAC7-225ENST00000491464 IL6STP40189 918 aaPredicted RBP12.93□□□□□ -0.34
HDAC7-225ENST00000491464 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
HDAC7-225ENST00000491464 RALBP1Q15311 655 aa12.93□□□□□ -0.34
HDAC7-225ENST00000491464 DALRD3Q5D0E6 543 aaKnown RBP12.93□□□□□ -0.34
HDAC7-225ENST00000491464 ARHGAP27Q6ZUM4 889 aa12.93□□□□□ -0.34
HDAC7-225ENST00000491464 DLG5Q8TDM6 1919 aa12.93□□□□□ -0.34
HDAC7-225ENST00000491464 ADCY9O60503 1353 aa12.93□□□□□ -0.34
HDAC7-225ENST00000491464 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
HDAC7-225ENST00000491464 SERPINB2P05120 415 aa12.92□□□□□ -0.34
HDAC7-225ENST00000491464 SNRPA1P09661 255 aaKnown RBP12.92□□□□□ -0.34
HDAC7-225ENST00000491464 BICDL1Q6ZP65 573 aa12.92□□□□□ -0.34
HDAC7-225ENST00000491464 ZNF526Q8TF50 670 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-225ENST00000491464 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
HDAC7-225ENST00000491464 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
HDAC7-225ENST00000491464 A1BGP04217 495 aa12.91□□□□□ -0.34
HDAC7-225ENST00000491464 KCNA3P22001 575 aa12.91□□□□□ -0.34
HDAC7-225ENST00000491464 CHRNA5P30532 468 aa12.91□□□□□ -0.34
HDAC7-225ENST00000491464 DDX10Q13206 875 aaKnown RBP12.91□□□□□ -0.34
HDAC7-225ENST00000491464 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
HDAC7-225ENST00000491464 TBC1D2BQ9UPU7 963 aa12.91□□□□□ -0.34
HDAC7-225ENST00000491464 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.34
HDAC7-225ENST00000491464 NPHP1O15259 732 aa12.9□□□□□ -0.34
HDAC7-225ENST00000491464 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
HDAC7-225ENST00000491464 PNISRQ8TF01 805 aaKnown RBP12.9□□□□□ -0.34
HDAC7-225ENST00000491464 TBC1D9BQ66K14 1250 aa12.89□□□□□ -0.35
HDAC7-225ENST00000491464 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
HDAC7-225ENST00000491464 PLEKHF1Q96S99 279 aa12.89□□□□□ -0.35
HDAC7-225ENST00000491464 USP16Q9Y5T5 823 aa12.89□□□□□ -0.35
HDAC7-225ENST00000491464 CARMIL3Q8ND23 1372 aa12.89□□□□□ -0.35
HDAC7-225ENST00000491464 BCORQ6W2J9 1755 aa12.89□□□□□ -0.35
HDAC7-225ENST00000491464 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
HDAC7-225ENST00000491464 ZNF652Q9Y2D9 606 aa12.88□□□□□ -0.35
HDAC7-225ENST00000491464 LAMB4A4D0S4 1761 aa12.88□□□□□ -0.35
HDAC7-225ENST00000491464 DLEC1Q9Y238 1755 aa12.88□□□□□ -0.35
HDAC7-225ENST00000491464 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
HDAC7-225ENST00000491464 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
HDAC7-225ENST00000491464 H0YIN7 160 aa12.87□□□□□ -0.35
HDAC7-225ENST00000491464 CAMTA2O94983 1202 aa12.87□□□□□ -0.35
HDAC7-225ENST00000491464 PIP4K2AP48426 406 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-225ENST00000491464 C2CD5Q86YS7 1000 aa12.87□□□□□ -0.35
HDAC7-225ENST00000491464 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
HDAC7-225ENST00000491464 PDZRN3Q9UPQ7 1066 aa12.87□□□□□ -0.35
HDAC7-225ENST00000491464 KDM3BQ7LBC6 1761 aa12.86□□□□□ -0.35
HDAC7-225ENST00000491464 PDE6BP35913 854 aa12.86□□□□□ -0.35
HDAC7-225ENST00000491464 ST5P78524 1137 aa12.86□□□□□ -0.35
HDAC7-225ENST00000491464 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
HDAC7-225ENST00000491464 TTLL6Q8N841 843 aa12.86□□□□□ -0.35
HDAC7-225ENST00000491464 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
HDAC7-225ENST00000491464 LMOD3Q0VAK6 560 aa12.85□□□□□ -0.35
HDAC7-225ENST00000491464 PRR5LQ6MZQ0 368 aa12.85□□□□□ -0.35
HDAC7-225ENST00000491464 CLEC4GQ6UXB4 293 aa12.85□□□□□ -0.35
HDAC7-225ENST00000491464 THUMPD2Q9BTF0 503 aaKnown RBP12.85□□□□□ -0.35
HDAC7-225ENST00000491464 BRIP1Q9BX63 1249 aa12.85□□□□□ -0.35
HDAC7-225ENST00000491464 RNF181Q9P0P0 153 aa12.85□□□□□ -0.35
HDAC7-225ENST00000491464 ANKRD31Q8N7Z5 1873 aa12.85□□□□□ -0.35
HDAC7-225ENST00000491464 RIPK4P57078 832 aa12.84□□□□□ -0.35
HDAC7-225ENST00000491464 WDR43Q15061 677 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC7-225ENST00000491464 ZNF622Q969S3 477 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC7-225ENST00000491464 SBF1O95248 1867 aa12.84□□□□□ -0.35
HDAC7-225ENST00000491464 NBPF26B4DH59 902 aa12.83□□□□□ -0.36
HDAC7-225ENST00000491464 RGL2O15211 777 aa12.83□□□□□ -0.36
HDAC7-225ENST00000491464 NBPF10Q6P3W6 841 aaKnown RBP12.83□□□□□ -0.36
HDAC7-225ENST00000491464 NBPF5PQ86XG9 351 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-225ENST00000491464 NBPF15Q8N660 670 aa12.83□□□□□ -0.36
HDAC7-225ENST00000491464 EIF4A1P60842 406 aaKnown RBP12.82□□□□□ -0.36
HDAC7-225ENST00000491464 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
HDAC7-225ENST00000491464 TSPYL4Q9UJ04 414 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms