RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-223ENST00000491295 TEX13AQ9BXU3 409 aaPredicted RBP24.08■■□□□ 1.45
GGA1-223ENST00000491295 POLRMTO00411 1230 aaKnown RBP24.07■■□□□ 1.44
GGA1-223ENST00000491295 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
GGA1-223ENST00000491295 ZNF526Q8TF50 670 aaPredicted RBP24.06■■□□□ 1.44
GGA1-223ENST00000491295 NUDCQ9Y266 331 aa24.06■■□□□ 1.44
GGA1-223ENST00000491295 COL15A1P39059 1388 aa24.05■■□□□ 1.44
GGA1-223ENST00000491295 BRCA1P38398 1863 aaKnown RBP24.05■■□□□ 1.44
GGA1-223ENST00000491295 CNGB1Q14028 1251 aaPredicted RBP24.05■■□□□ 1.44
GGA1-223ENST00000491295 DALRD3Q5D0E6 543 aaKnown RBP24.05■■□□□ 1.44
GGA1-223ENST00000491295 ZBTB1Q9Y2K1 713 aa24.05■■□□□ 1.44
GGA1-223ENST00000491295 A0A087WZG4 1122 aa24.04■■□□□ 1.44
GGA1-223ENST00000491295 ZNF790Q6PG37 636 aa24.04■■□□□ 1.44
GGA1-223ENST00000491295 UBR2Q8IWV8 1755 aa24.03■■□□□ 1.44
GGA1-223ENST00000491295 ARFGEF1Q9Y6D6 1849 aa24.01■■□□□ 1.43
GGA1-223ENST00000491295 EIF5P55010 431 aaKnown RBP24.01■■□□□ 1.43
GGA1-223ENST00000491295 NFIXQ14938 502 aa24.01■■□□□ 1.43
GGA1-223ENST00000491295 CEMIPQ8WUJ3 1361 aa24.01■■□□□ 1.43
GGA1-223ENST00000491295 HEG1Q9ULI3 1381 aa24.01■■□□□ 1.43
GGA1-223ENST00000491295 CANXP27824 592 aaKnown RBP24■■□□□ 1.43
GGA1-223ENST00000491295 ZNF496Q96IT1 587 aaPredicted RBP24■■□□□ 1.43
GGA1-223ENST00000491295 FMNL2Q96PY5 1086 aa24■■□□□ 1.43
GGA1-223ENST00000491295 RSPH6AQ9H0K4 717 aa24■■□□□ 1.43
GGA1-223ENST00000491295 KIF3CO14782 793 aa23.99■■□□□ 1.43
GGA1-223ENST00000491295 PRKAR2BP31323 418 aa23.99■■□□□ 1.43
GGA1-223ENST00000491295 SERPINB2P05120 415 aa23.98■■□□□ 1.43
GGA1-223ENST00000491295 PHACTR3Q96KR7 559 aa23.98■■□□□ 1.43
GGA1-223ENST00000491295 BCL2L12Q9HB09 334 aa23.98■■□□□ 1.43
GGA1-223ENST00000491295 HSPA6P17066 643 aa23.97■■□□□ 1.43
GGA1-223ENST00000491295 PPP2R1AP30153 589 aa23.97■■□□□ 1.43
GGA1-223ENST00000491295 CHRNA5P30532 468 aa23.97■■□□□ 1.43
GGA1-223ENST00000491295 IL6STP40189 918 aaPredicted RBP23.97■■□□□ 1.43
GGA1-223ENST00000491295 BTBD11A6QL63 1104 aa23.96■■□□□ 1.43
GGA1-223ENST00000491295 SIPA1L3O60292 1781 aaPredicted RBP23.96■■□□□ 1.43
GGA1-223ENST00000491295 U2AF1L5P0DN76 240 aaPredicted RBP23.95■■□□□ 1.42
GGA1-223ENST00000491295 U2AF1Q01081 240 aaKnown RBP eCLIP23.95■■□□□ 1.42
GGA1-223ENST00000491295 C9orf131Q5VYM1 1079 aa23.95■■□□□ 1.42
GGA1-223ENST00000491295 NPM2Q86SE8 214 aaKnown RBP23.95■■□□□ 1.42
GGA1-223ENST00000491295 PDZRN3Q9UPQ7 1066 aa23.95■■□□□ 1.42
GGA1-223ENST00000491295 NRXN2Q9P2S2 1712 aa23.95■■□□□ 1.42
GGA1-223ENST00000491295 CEP350Q5VT06 3117 aa23.94■■□□□ 1.42
GGA1-223ENST00000491295 TOMM70O94826 608 aa23.94■■□□□ 1.42
GGA1-223ENST00000491295 RTF1Q92541 710 aaKnown RBP23.94■■□□□ 1.42
GGA1-223ENST00000491295 HTATSF1O43719 755 aaKnown RBP23.93■■□□□ 1.42
GGA1-223ENST00000491295 AFDNP55196 1824 aaKnown RBP23.93■■□□□ 1.42
GGA1-223ENST00000491295 H0YIN7 160 aa23.91■■□□□ 1.42
GGA1-223ENST00000491295 TTLL6Q8N841 843 aa23.91■■□□□ 1.42
GGA1-223ENST00000491295 KDM2BQ8NHM5 1336 aa23.9■■□□□ 1.42
GGA1-223ENST00000491295 RNF181Q9P0P0 153 aa23.89■■□□□ 1.41
GGA1-223ENST00000491295 ZC3H4Q9UPT8 1303 aaKnown RBP23.88■■□□□ 1.41
GGA1-223ENST00000491295 A1BGP04217 495 aa23.88■■□□□ 1.41
GGA1-223ENST00000491295 PDE6BP35913 854 aa23.88■■□□□ 1.41
GGA1-223ENST00000491295 TBC1D9BQ66K14 1250 aa23.88■■□□□ 1.41
GGA1-223ENST00000491295 BICDL1Q6ZP65 573 aa23.88■■□□□ 1.41
GGA1-223ENST00000491295 C2CD5Q86YS7 1000 aa23.88■■□□□ 1.41
GGA1-223ENST00000491295 BRIP1Q9BX63 1249 aa23.88■■□□□ 1.41
GGA1-223ENST00000491295 TBC1D2BQ9UPU7 963 aa23.88■■□□□ 1.41
GGA1-223ENST00000491295 SNRPA1P09661 255 aaKnown RBP23.87■■□□□ 1.41
GGA1-223ENST00000491295 ZNF330Q9Y3S2 320 aaPredicted RBP23.87■■□□□ 1.41
GGA1-223ENST00000491295 KCNQ3O43525 872 aa23.86■■□□□ 1.41
GGA1-223ENST00000491295 NEFMP07197 916 aa23.86■■□□□ 1.41
GGA1-223ENST00000491295 SETDB2Q96T68 719 aa23.86■■□□□ 1.41
GGA1-223ENST00000491295 NMRK2Q9NPI5 230 aa23.86■■□□□ 1.41
GGA1-223ENST00000491295 CARMIL3Q8ND23 1372 aa23.86■■□□□ 1.41
GGA1-223ENST00000491295 APLP1P51693 650 aa23.85■■□□□ 1.41
GGA1-223ENST00000491295 CLEC4GQ6UXB4 293 aa23.85■■□□□ 1.41
GGA1-223ENST00000491295 C16orf71Q8IYS4 520 aaPredicted RBP23.85■■□□□ 1.41
GGA1-223ENST00000491295 USP16Q9Y5T5 823 aa23.85■■□□□ 1.41
GGA1-223ENST00000491295 DLEC1Q9Y238 1755 aa23.85■■□□□ 1.41
GGA1-223ENST00000491295 SBF1O95248 1867 aa23.84■■□□□ 1.41
GGA1-223ENST00000491295 RGL2O15211 777 aa23.84■■□□□ 1.41
GGA1-223ENST00000491295 CAMTA2O94983 1202 aa23.84■■□□□ 1.41
GGA1-223ENST00000491295 LMNB1P20700 586 aa23.84■■□□□ 1.41
GGA1-223ENST00000491295 MCM10Q7L590 875 aa23.84■■□□□ 1.41
GGA1-223ENST00000491295 RBM46Q8TBY0 533 aaKnown RBP23.84■■□□□ 1.41
GGA1-223ENST00000491295 SCN7AQ01118 1682 aa23.83■■□□□ 1.41
GGA1-223ENST00000491295 TAF7Q15545 349 aaPredicted RBP23.83■■□□□ 1.41
GGA1-223ENST00000491295 DZIP3Q86Y13 1208 aaKnown RBP23.83■■□□□ 1.41
GGA1-223ENST00000491295 PRR5LQ6MZQ0 368 aa23.82■■□□□ 1.4
GGA1-223ENST00000491295 PNNQ9H307 717 aaKnown RBP23.81■■□□□ 1.4
GGA1-223ENST00000491295 ZNF652Q9Y2D9 606 aa23.81■■□□□ 1.4
GGA1-223ENST00000491295 FSTL1Q12841 308 aa23.8■■□□□ 1.4
GGA1-223ENST00000491295 CNBD1Q8NA66 436 aa23.8■■□□□ 1.4
GGA1-223ENST00000491295 NPHP1O15259 732 aa23.79■■□□□ 1.4
GGA1-223ENST00000491295 ST5P78524 1137 aa23.79■■□□□ 1.4
GGA1-223ENST00000491295 DCTN1Q14203 1278 aa23.79■■□□□ 1.4
GGA1-223ENST00000491295 PNISRQ8TF01 805 aaKnown RBP23.79■■□□□ 1.4
GGA1-223ENST00000491295 ZNF622Q969S3 477 aaKnown RBP eCLIP23.79■■□□□ 1.42e-18■□□□□ 9.6
GGA1-223ENST00000491295 RASSF7Q02833 373 aa23.78■■□□□ 1.4
GGA1-223ENST00000491295 STYK1Q6J9G0 422 aa23.77■■□□□ 1.4
GGA1-223ENST00000491295 CNKSR1Q969H4 720 aa23.77■■□□□ 1.4
GGA1-223ENST00000491295 RRAGCQ9HB90 399 aa23.77■■□□□ 1.4
GGA1-223ENST00000491295 PRAMEF22A3QJZ6 481 aa23.76■■□□□ 1.39
GGA1-223ENST00000491295 GLTPD2A6NH11 291 aa23.76■■□□□ 1.39
GGA1-223ENST00000491295 ANKRD31Q8N7Z5 1873 aa23.76■■□□□ 1.39
GGA1-223ENST00000491295 PLEKHF1Q96S99 279 aa23.75■■□□□ 1.39
GGA1-223ENST00000491295 TNRC6CQ9HCJ0 1690 aaKnown RBP23.74■■□□□ 1.39
GGA1-223ENST00000491295 BCORQ6W2J9 1755 aa23.74■■□□□ 1.39
GGA1-223ENST00000491295 NFKBIEO00221 500 aa23.74■■□□□ 1.39
GGA1-223ENST00000491295 SRGNP10124 158 aa23.74■■□□□ 1.39
GGA1-223ENST00000491295 SOGA3Q5TF21 947 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms