RNA–Protein interactions for RNA: ENST00000491294.1

ARPC1B-220, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 1,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-220ENST00000491294 USPL1Q5W0Q7 1092 aa23.61■■□□□ 1.37
ARPC1B-220ENST00000491294 NARFQ9UHQ1 456 aa23.61■■□□□ 1.37
ARPC1B-220ENST00000491294 CANXP27824 592 aaKnown RBP23.6■■□□□ 1.37
ARPC1B-220ENST00000491294 MCM10Q7L590 875 aa23.6■■□□□ 1.37
ARPC1B-220ENST00000491294 COL15A1P39059 1388 aa23.6■■□□□ 1.37
ARPC1B-220ENST00000491294 SIPA1L3O60292 1781 aaPredicted RBP23.6■■□□□ 1.37
ARPC1B-220ENST00000491294 C10orf71Q711Q0 1435 aa23.59■■□□□ 1.37
ARPC1B-220ENST00000491294 TM4SF1P30408 202 aa23.59■■□□□ 1.37
ARPC1B-220ENST00000491294 GOLGB1Q14789 3259 aaKnown RBP23.59■■□□□ 1.37
ARPC1B-220ENST00000491294 KCNQ3O43525 872 aa23.58■■□□□ 1.37
ARPC1B-220ENST00000491294 DDR1Q08345 913 aa23.58■■□□□ 1.37
ARPC1B-220ENST00000491294 WWC3Q9ULE0 1092 aa23.58■■□□□ 1.37
ARPC1B-220ENST00000491294 PXDNLA1KZ92 1463 aa23.57■■□□□ 1.36
ARPC1B-220ENST00000491294 A0A087WZG4 1122 aa23.57■■□□□ 1.36
ARPC1B-220ENST00000491294 EIF5P55010 431 aaKnown RBP23.57■■□□□ 1.36
ARPC1B-220ENST00000491294 DCTN1Q14203 1278 aa23.57■■□□□ 1.36
ARPC1B-220ENST00000491294 PNNQ9H307 717 aaKnown RBP23.57■■□□□ 1.36
ARPC1B-220ENST00000491294 KIF13BQ9NQT8 1826 aa23.56■■□□□ 1.36
ARPC1B-220ENST00000491294 PLEKHF1Q96S99 279 aa23.56■■□□□ 1.36
ARPC1B-220ENST00000491294 A0A0G2JLW4 131 aa23.55■■□□□ 1.36
ARPC1B-220ENST00000491294 POLRMTO00411 1230 aaKnown RBP23.55■■□□□ 1.36
ARPC1B-220ENST00000491294 DPEP1P16444 411 aa23.54■■□□□ 1.36
ARPC1B-220ENST00000491294 IL6STP40189 918 aaPredicted RBP23.53■■□□□ 1.36
ARPC1B-220ENST00000491294 NFIXQ14938 502 aa23.53■■□□□ 1.36
ARPC1B-220ENST00000491294 TAF7Q15545 349 aaPredicted RBP23.53■■□□□ 1.36
ARPC1B-220ENST00000491294 BCL2L12Q9HB09 334 aa23.53■■□□□ 1.36
ARPC1B-220ENST00000491294 A1BGP04217 495 aa23.52■■□□□ 1.36
ARPC1B-220ENST00000491294 SNRPA1P09661 255 aaKnown RBP23.51■■□□□ 1.35
ARPC1B-220ENST00000491294 NFE2L2Q16236 605 aa23.51■■□□□ 1.35
ARPC1B-220ENST00000491294 NPM2Q86SE8 214 aaKnown RBP23.51■■□□□ 1.35
ARPC1B-220ENST00000491294 BCS1LQ9Y276 419 aa23.51■■□□□ 1.35
ARPC1B-220ENST00000491294 USP16Q9Y5T5 823 aa23.51■■□□□ 1.35
ARPC1B-220ENST00000491294 MAPK8IP3Q9UPT6 1336 aa23.51■■□□□ 1.35
ARPC1B-220ENST00000491294 ZNF330Q9Y3S2 320 aaPredicted RBP23.5■■□□□ 1.35
ARPC1B-220ENST00000491294 MYBBP1AQ9BQG0 1328 aaKnown RBP23.5■■□□□ 1.35
ARPC1B-220ENST00000491294 KIAA1551Q9HCM1 1747 aa23.5■■□□□ 1.35
ARPC1B-220ENST00000491294 KCNA3P22001 575 aa23.49■■□□□ 1.35
ARPC1B-220ENST00000491294 N4BP2Q86UW6 1770 aaPredicted RBP23.49■■□□□ 1.35
ARPC1B-220ENST00000491294 SERPINB2P05120 415 aa23.48■■□□□ 1.35
ARPC1B-220ENST00000491294 PNISRQ8TF01 805 aaKnown RBP23.48■■□□□ 1.35
ARPC1B-220ENST00000491294 PIM2Q9P1W9 311 aa23.48■■□□□ 1.35
ARPC1B-220ENST00000491294 TBC1D2BQ9UPU7 963 aa23.48■■□□□ 1.35
ARPC1B-220ENST00000491294 PRAMEF22A3QJZ6 481 aa23.47■■□□□ 1.35
ARPC1B-220ENST00000491294 MIS18AQ9NYP9 233 aa23.46■■□□□ 1.35
ARPC1B-220ENST00000491294 BICDL1Q6ZP65 573 aa23.45■■□□□ 1.34
ARPC1B-220ENST00000491294 CHRNA5P30532 468 aa23.44■■□□□ 1.34
ARPC1B-220ENST00000491294 DLG5Q8TDM6 1919 aa23.43■■□□□ 1.34
ARPC1B-220ENST00000491294 DALRD3Q5D0E6 543 aaKnown RBP23.43■■□□□ 1.34
ARPC1B-220ENST00000491294 TBC1D9BQ66K14 1250 aa23.43■■□□□ 1.34
ARPC1B-220ENST00000491294 ATP10DQ9P241 1426 aa23.42■■□□□ 1.34
ARPC1B-220ENST00000491294 CAMTA2O94983 1202 aa23.42■■□□□ 1.34
ARPC1B-220ENST00000491294 PIP4K2AP48426 406 aaPredicted RBP23.42■■□□□ 1.34
ARPC1B-220ENST00000491294 ARHGAP27Q6ZUM4 889 aa23.42■■□□□ 1.34
ARPC1B-220ENST00000491294 DZIP3Q86Y13 1208 aaKnown RBP23.42■■□□□ 1.34
ARPC1B-220ENST00000491294 THUMPD2Q9BTF0 503 aaKnown RBP23.42■■□□□ 1.34
ARPC1B-220ENST00000491294 ADCY9O60503 1353 aa23.41■■□□□ 1.34
ARPC1B-220ENST00000491294 ZEB1P37275 1124 aaPredicted RBP23.41■■□□□ 1.34
ARPC1B-220ENST00000491294 RIPK4P57078 832 aa23.41■■□□□ 1.34
ARPC1B-220ENST00000491294 BRCA1P38398 1863 aaKnown RBP23.41■■□□□ 1.34
ARPC1B-220ENST00000491294 AFDNP55196 1824 aaKnown RBP23.4■■□□□ 1.34
ARPC1B-220ENST00000491294 NRXN2Q9P2S2 1712 aa23.4■■□□□ 1.34
ARPC1B-220ENST00000491294 NBPF26B4DH59 902 aa23.39■■□□□ 1.33
ARPC1B-220ENST00000491294 GIGYF1O75420 1035 aaPredicted RBP23.39■■□□□ 1.33
ARPC1B-220ENST00000491294 EIF4A1P60842 406 aaKnown RBP23.39■■□□□ 1.33
ARPC1B-220ENST00000491294 NBPF10Q6P3W6 841 aaKnown RBP23.39■■□□□ 1.33
ARPC1B-220ENST00000491294 NBPF15Q8N660 670 aa23.39■■□□□ 1.33
ARPC1B-220ENST00000491294 SETDB2Q96T68 719 aa23.39■■□□□ 1.33
ARPC1B-220ENST00000491294 PRKRIP1Q9H875 184 aaPredicted RBP23.39■■□□□ 1.33
ARPC1B-220ENST00000491294 TMPOP42166 694 aaKnown RBP23.38■■□□□ 1.33
ARPC1B-220ENST00000491294 CLEC4GQ6UXB4 293 aa23.38■■□□□ 1.33
ARPC1B-220ENST00000491294 CARMIL3Q8ND23 1372 aa23.38■■□□□ 1.33
ARPC1B-220ENST00000491294 SCN7AQ01118 1682 aa23.38■■□□□ 1.33
ARPC1B-220ENST00000491294 C1QTNF8P60827 252 aa23.37■■□□□ 1.33
ARPC1B-220ENST00000491294 LMOD3Q0VAK6 560 aa23.37■■□□□ 1.33
ARPC1B-220ENST00000491294 WDR43Q15061 677 aaKnown RBP eCLIP23.37■■□□□ 1.33
ARPC1B-220ENST00000491294 GPBP1L1Q9HC44 474 aaPredicted RBP23.37■■□□□ 1.33
ARPC1B-220ENST00000491294 H0YIN7 160 aa23.36■■□□□ 1.33
ARPC1B-220ENST00000491294 C2CD5Q86YS7 1000 aa23.36■■□□□ 1.33
ARPC1B-220ENST00000491294 PDZRN3Q9UPQ7 1066 aa23.36■■□□□ 1.33
ARPC1B-220ENST00000491294 ZNF652Q9Y2D9 606 aa23.36■■□□□ 1.33
ARPC1B-220ENST00000491294 RGL2O15211 777 aa23.35■■□□□ 1.33
ARPC1B-220ENST00000491294 PRR5LQ6MZQ0 368 aa23.35■■□□□ 1.33
ARPC1B-220ENST00000491294 RUNDC1Q96C34 613 aa23.35■■□□□ 1.33
ARPC1B-220ENST00000491294 BRIP1Q9BX63 1249 aa23.35■■□□□ 1.33
ARPC1B-220ENST00000491294 KDM3BQ7LBC6 1761 aa23.35■■□□□ 1.33
ARPC1B-220ENST00000491294 ARFGEF1Q9Y6D6 1849 aa23.34■■□□□ 1.33
ARPC1B-220ENST00000491294 CCDC146Q8IYE0 955 aa23.34■■□□□ 1.33
ARPC1B-220ENST00000491294 BABAM1Q9NWV8 329 aa23.34■■□□□ 1.33
ARPC1B-220ENST00000491294 TSPYL4Q9UJ04 414 aa23.34■■□□□ 1.33
ARPC1B-220ENST00000491294 PDE6BP35913 854 aa23.33■■□□□ 1.33
ARPC1B-220ENST00000491294 TTLL6Q8N841 843 aa23.33■■□□□ 1.33
ARPC1B-220ENST00000491294 ADAMTS8Q9UP79 889 aa23.33■■□□□ 1.33
ARPC1B-220ENST00000491294 NPHP1O15259 732 aa23.32■■□□□ 1.32
ARPC1B-220ENST00000491294 CNBD1Q8NA66 436 aa23.32■■□□□ 1.32
ARPC1B-220ENST00000491294 ZNF526Q8TF50 670 aaPredicted RBP23.32■■□□□ 1.32
ARPC1B-220ENST00000491294 RRP7AQ9Y3A4 280 aaKnown RBP23.32■■□□□ 1.32
ARPC1B-220ENST00000491294 ST5P78524 1137 aa23.31■■□□□ 1.32
ARPC1B-220ENST00000491294 NEUROD2Q15784 382 aa23.31■■□□□ 1.32
ARPC1B-220ENST00000491294 BCORQ6W2J9 1755 aa23.31■■□□□ 1.32
ARPC1B-220ENST00000491294 C9orf131Q5VYM1 1079 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms