RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 GNASQ5JWF2 1037 aa7.14□□□□□ -1.27
CD46-216ENST00000490278 STAG2Q8N3U4 1231 aa7.14□□□□□ -1.27
CD46-216ENST00000490278 RNF217Q8TC41 542 aa7.14□□□□□ -1.27
CD46-216ENST00000490278 CCER1Q8TC90 406 aaPredicted RBP7.14□□□□□ -1.27
CD46-216ENST00000490278 VTI1AQ96AJ9 217 aa7.14□□□□□ -1.27
CD46-216ENST00000490278 ZFP42Q96MM3 310 aa7.14□□□□□ -1.27
CD46-216ENST00000490278 NIFKQ9BYG3 293 aaKnown RBP7.14□□□□□ -1.27
CD46-216ENST00000490278 CABP1Q9NZU7 370 aa7.14□□□□□ -1.27
CD46-216ENST00000490278 GMPR2Q9P2T1 348 aaKnown RBP7.14□□□□□ -1.27
CD46-216ENST00000490278 MTMR7Q9Y216 660 aa7.14□□□□□ -1.27
CD46-216ENST00000490278 SOS2Q07890 1332 aaPredicted RBP7.13□□□□□ -1.27
CD46-216ENST00000490278 SERTM1A2A2V5 107 aa7.13□□□□□ -1.27
CD46-216ENST00000490278 TTLL8A6PVC2 850 aa7.13□□□□□ -1.27
CD46-216ENST00000490278 PTCD1O75127 700 aaKnown RBP7.13□□□□□ -1.27
CD46-216ENST00000490278 INSM1Q01101 510 aaPredicted RBP7.13□□□□□ -1.27
CD46-216ENST00000490278 TXNDC2Q86VQ3 553 aa7.13□□□□□ -1.27
CD46-216ENST00000490278 ZNF295-AS1Q8N0V1 137 aa7.13□□□□□ -1.27
CD46-216ENST00000490278 COL26A1Q96A83 441 aa7.13□□□□□ -1.27
CD46-216ENST00000490278 MKNK1Q9BUB5 465 aa7.13□□□□□ -1.27
CD46-216ENST00000490278 C2orf49Q9BVC5 232 aaPredicted RBP7.13□□□□□ -1.27
CD46-216ENST00000490278 ATP13A2Q9NQ11 1180 aa7.13□□□□□ -1.27
CD46-216ENST00000490278 GNEQ9Y223 722 aaKnown RBP7.13□□□□□ -1.27
CD46-216ENST00000490278 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
CD46-216ENST00000490278 SPATA31C2B4DYI2 1134 aa7.12□□□□□ -1.27
CD46-216ENST00000490278 NOS2P35228 1153 aa7.12□□□□□ -1.27
CD46-216ENST00000490278 SCNN1AP37088 669 aa7.12□□□□□ -1.27
CD46-216ENST00000490278 LYSMD3Q7Z3D4 306 aa7.12□□□□□ -1.27
CD46-216ENST00000490278 PRICKLE2Q7Z3G6 844 aa7.12□□□□□ -1.27
CD46-216ENST00000490278 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
CD46-216ENST00000490278 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.12□□□□□ -1.27
CD46-216ENST00000490278 IVNS1ABPQ9Y6Y0 642 aa7.12□□□□□ -1.27
CD46-216ENST00000490278 C11orf95C9JLR9 678 aaPredicted RBP7.11□□□□□ -1.27
CD46-216ENST00000490278 EML1O00423 815 aa7.11□□□□□ -1.27
CD46-216ENST00000490278 C4orf17Q53FE4 359 aa7.11□□□□□ -1.27
CD46-216ENST00000490278 POTEAQ6S8J7 498 aa7.11□□□□□ -1.27
CD46-216ENST00000490278 ZDHHC1Q8WTX9 485 aa7.11□□□□□ -1.27
CD46-216ENST00000490278 L3MBTL2Q969R5 705 aa7.11□□□□□ -1.27
CD46-216ENST00000490278 ZNF232Q9UNY5 417 aa7.11□□□□□ -1.27
CD46-216ENST00000490278 FIGNL2A6NMB9 653 aa7.1□□□□□ -1.27
CD46-216ENST00000490278 PLA2G4AP47712 749 aa7.1□□□□□ -1.27
CD46-216ENST00000490278 HIRAP54198 1017 aaPredicted RBP7.1□□□□□ -1.27
CD46-216ENST00000490278 POU4F2Q12837 409 aa7.1□□□□□ -1.27
CD46-216ENST00000490278 WDR44Q5JSH3 913 aa7.1□□□□□ -1.27
CD46-216ENST00000490278 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
CD46-216ENST00000490278 NBPF10Q6P3W6 841 aaKnown RBP7.1□□□□□ -1.27
CD46-216ENST00000490278 CAPN12Q6ZSI9 719 aa7.1□□□□□ -1.27
CD46-216ENST00000490278 PARP3Q9Y6F1 533 aa7.1□□□□□ -1.27
CD46-216ENST00000490278 SERPINB4P48594 390 aa7.09□□□□□ -1.27
CD46-216ENST00000490278 SH3PXD2AQ5TCZ1 1133 aa7.09□□□□□ -1.27
CD46-216ENST00000490278 SEPT3Q9UH03 358 aa7.09□□□□□ -1.27
CD46-216ENST00000490278 MAN1A2O60476 641 aa7.08□□□□□ -1.28
CD46-216ENST00000490278 PHKA2P46019 1235 aa7.08□□□□□ -1.28
CD46-216ENST00000490278 NAA30Q147X3 362 aaPredicted RBP7.08□□□□□ -1.28
CD46-216ENST00000490278 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.08□□□□□ -1.28
CD46-216ENST00000490278 NBPF1Q3BBV0 1214 aa7.08□□□□□ -1.28
CD46-216ENST00000490278 ALDH16A1Q8IZ83 802 aa7.08□□□□□ -1.28
CD46-216ENST00000490278 GZF1Q9H116 711 aaPredicted RBP7.08□□□□□ -1.28
CD46-216ENST00000490278 DNMT3LQ9UJW3 386 aa7.08□□□□□ -1.28
CD46-216ENST00000490278 HCN4Q9Y3Q4 1203 aa7.08□□□□□ -1.28
CD46-216ENST00000490278 ABL1P00519 1130 aa7.07□□□□□ -1.28
CD46-216ENST00000490278 RHOQP17081 205 aa7.07□□□□□ -1.28
CD46-216ENST00000490278 C1orf53Q5VUE5 145 aa7.07□□□□□ -1.28
CD46-216ENST00000490278 GTF3C2Q8WUA4 911 aaPredicted RBP7.07□□□□□ -1.28
CD46-216ENST00000490278 KIFC2Q96AC6 838 aa7.07□□□□□ -1.28
CD46-216ENST00000490278 AIDAQ96BJ3 306 aa7.07□□□□□ -1.28
CD46-216ENST00000490278 NGLY1Q96IV0 654 aa7.07□□□□□ -1.28
CD46-216ENST00000490278 PHACTR1Q9C0D0 580 aa7.07□□□□□ -1.28
CD46-216ENST00000490278 SENP2Q9HC62 589 aa7.07□□□□□ -1.28
CD46-216ENST00000490278 TIMMDC1Q9NPL8 285 aa7.07□□□□□ -1.28
CD46-216ENST00000490278 EGFL7Q9UHF1 273 aa7.07□□□□□ -1.28
CD46-216ENST00000490278 TXLNAP40222 546 aa7.06□□□□□ -1.28
CD46-216ENST00000490278 C16orf46Q6P387 395 aa7.06□□□□□ -1.28
CD46-216ENST00000490278 QTRT2Q9H974 415 aaKnown RBP7.06□□□□□ -1.28
CD46-216ENST00000490278 ZDHHC3Q9NYG2 299 aa7.06□□□□□ -1.28
CD46-216ENST00000490278 A0A1B0GTH6 734 aa7.05□□□□□ -1.28
CD46-216ENST00000490278 TATP17735 454 aaPredicted RBP7.05□□□□□ -1.28
CD46-216ENST00000490278 RTN1Q16799 776 aa7.05□□□□□ -1.28
CD46-216ENST00000490278 COX20Q5RI15 118 aa7.05□□□□□ -1.28
CD46-216ENST00000490278 HELQQ8TDG4 1101 aa7.05□□□□□ -1.28
CD46-216ENST00000490278 MYO19Q96H55 970 aa7.05□□□□□ -1.28
CD46-216ENST00000490278 TRIM47Q96LD4 638 aa7.05□□□□□ -1.28
CD46-216ENST00000490278 SAP130Q9H0E3 1048 aa7.05□□□□□ -1.28
CD46-216ENST00000490278 DNMT3AQ9Y6K1 912 aaPredicted RBP7.05□□□□□ -1.28
CD46-216ENST00000490278 SOWAHDA6NJG2 315 aa7.04□□□□□ -1.28
CD46-216ENST00000490278 SOBPA7XYQ1 873 aa7.04□□□□□ -1.28
CD46-216ENST00000490278 FKBP4Q02790 459 aaKnown RBP eCLIP7.04□□□□□ -1.28
CD46-216ENST00000490278 ZNF211Q13398 564 aaPredicted RBP7.04□□□□□ -1.28
CD46-216ENST00000490278 ANO2Q9NQ90 1003 aa7.04□□□□□ -1.28
CD46-216ENST00000490278 PODXL2Q9NZ53 605 aa7.04□□□□□ -1.28
CD46-216ENST00000490278 H3BRB1 525 aa7.03□□□□□ -1.28
CD46-216ENST00000490278 TERTO14746 1132 aaKnown RBP7.03□□□□□ -1.28
CD46-216ENST00000490278 ICMTO60725 284 aa7.03□□□□□ -1.28
CD46-216ENST00000490278 MSX1P28360 303 aa7.03□□□□□ -1.28
CD46-216ENST00000490278 SF3B2Q13435 895 aaKnown RBP7.03□□□□□ -1.28
CD46-216ENST00000490278 SND1Q7KZF4 910 aaKnown RBP eCLIP7.03□□□□□ -1.285e-17■■□□□ 12.3
CD46-216ENST00000490278 RHPN1Q8TCX5 695 aa7.03□□□□□ -1.28
CD46-216ENST00000490278 TUT1Q9H6E5 874 aaKnown RBP7.03□□□□□ -1.28
CD46-216ENST00000490278 LRFN2Q9ULH4 789 aa7.03□□□□□ -1.28
CD46-216ENST00000490278 DYRK1BQ9Y463 629 aa7.03□□□□□ -1.28
CD46-216ENST00000490278 ATP4AP20648 1035 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms