RNA–Protein interactions for RNA: ENST00000489906.5

VDAC1-206, Transcript of voltage dependent anion channel 1, humanhuman

TSL 2

Gene VDAC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-206ENST00000489906 NFIXQ14938 502 aa17.17■□□□□ 0.34
VDAC1-206ENST00000489906 RBM46Q8TBY0 533 aaKnown RBP17.17■□□□□ 0.34
VDAC1-206ENST00000489906 ZBTB1Q9Y2K1 713 aa17.17■□□□□ 0.34
VDAC1-206ENST00000489906 KDM2BQ8NHM5 1336 aa17.16■□□□□ 0.34
VDAC1-206ENST00000489906 CLSPNQ9HAW4 1339 aa17.16■□□□□ 0.34
VDAC1-206ENST00000489906 WDR90Q96KV7 1748 aa17.16■□□□□ 0.34
VDAC1-206ENST00000489906 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
VDAC1-206ENST00000489906 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
VDAC1-206ENST00000489906 BICDL1Q6ZP65 573 aa17.15■□□□□ 0.34
VDAC1-206ENST00000489906 COL15A1P39059 1388 aa17.15■□□□□ 0.34
VDAC1-206ENST00000489906 MTHFSDQ2M296 383 aaKnown RBP17.14■□□□□ 0.33
VDAC1-206ENST00000489906 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.33
VDAC1-206ENST00000489906 NARFQ9UHQ1 456 aa17.14■□□□□ 0.33
VDAC1-206ENST00000489906 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.33
VDAC1-206ENST00000489906 SERPINB2P05120 415 aa17.13■□□□□ 0.33
VDAC1-206ENST00000489906 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
VDAC1-206ENST00000489906 CCER1Q8TC90 406 aaPredicted RBP17.13■□□□□ 0.33
VDAC1-206ENST00000489906 SBF1O95248 1867 aa17.13■□□□□ 0.33
VDAC1-206ENST00000489906 CARMIL3Q8ND23 1372 aa17.13■□□□□ 0.33
VDAC1-206ENST00000489906 VIRMAQ69YN4 1812 aaKnown RBP17.12■□□□□ 0.33
VDAC1-206ENST00000489906 PRELPP51888 382 aa17.12■□□□□ 0.33
VDAC1-206ENST00000489906 C2CD5Q86YS7 1000 aa17.12■□□□□ 0.33
VDAC1-206ENST00000489906 CCDC24Q8N4L8 307 aa17.12■□□□□ 0.33
VDAC1-206ENST00000489906 ZNF219Q9P2Y4 722 aaPredicted RBP17.12■□□□□ 0.33
VDAC1-206ENST00000489906 ZNF330Q9Y3S2 320 aaPredicted RBP17.12■□□□□ 0.33
VDAC1-206ENST00000489906 MRC1P22897 1456 aa17.12■□□□□ 0.33
VDAC1-206ENST00000489906 PCNTO95613 3336 aa17.11■□□□□ 0.33
VDAC1-206ENST00000489906 FSTL1Q12841 308 aa17.1■□□□□ 0.33
VDAC1-206ENST00000489906 KLRG1Q96E93 195 aa17.1■□□□□ 0.33
VDAC1-206ENST00000489906 KIF7Q2M1P5 1343 aa17.1■□□□□ 0.33
VDAC1-206ENST00000489906 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
VDAC1-206ENST00000489906 TTLL6Q8N841 843 aa17.09■□□□□ 0.33
VDAC1-206ENST00000489906 TNRC6CQ9HCJ0 1690 aaKnown RBP17.08■□□□□ 0.32
VDAC1-206ENST00000489906 LMNB1P20700 586 aa17.08■□□□□ 0.32
VDAC1-206ENST00000489906 TTC5Q8N0Z6 440 aa17.08■□□□□ 0.32
VDAC1-206ENST00000489906 H0YIN7 160 aa17.07■□□□□ 0.32
VDAC1-206ENST00000489906 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
VDAC1-206ENST00000489906 COL13A1Q5TAT6 717 aaPredicted RBP17.07■□□□□ 0.32
VDAC1-206ENST00000489906 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
VDAC1-206ENST00000489906 SMC1BQ8NDV3 1235 aa17.07■□□□□ 0.32
VDAC1-206ENST00000489906 NRXN2Q9P2S2 1712 aa17.07■□□□□ 0.32
VDAC1-206ENST00000489906 NFKBIEO00221 500 aa17.06■□□□□ 0.32
VDAC1-206ENST00000489906 CAPN15O75808 1086 aa17.06■□□□□ 0.32
VDAC1-206ENST00000489906 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.32
VDAC1-206ENST00000489906 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
VDAC1-206ENST00000489906 TBC1D2BQ9UPU7 963 aa17.06■□□□□ 0.32
VDAC1-206ENST00000489906 CCDC88AQ3V6T2 1871 aa17.05■□□□□ 0.32
VDAC1-206ENST00000489906 STARD3NLO95772 234 aa17.05■□□□□ 0.32
VDAC1-206ENST00000489906 VSIG10Q8N0Z9 540 aa17.05■□□□□ 0.32
VDAC1-206ENST00000489906 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
VDAC1-206ENST00000489906 DLEC1Q9Y238 1755 aa17.05■□□□□ 0.32
VDAC1-206ENST00000489906 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
VDAC1-206ENST00000489906 GLTPD2A6NH11 291 aa17.04■□□□□ 0.32
VDAC1-206ENST00000489906 C21orf2O43822 256 aa17.04■□□□□ 0.32
VDAC1-206ENST00000489906 EIF5P55010 431 aaKnown RBP17.04■□□□□ 0.32
VDAC1-206ENST00000489906 TEFQ10587 303 aa17.04■□□□□ 0.32
VDAC1-206ENST00000489906 IL17REQ8NFR9 667 aa17.04■□□□□ 0.32
VDAC1-206ENST00000489906 VEGFAP15692 232 aaPredicted RBP17.03■□□□□ 0.32
VDAC1-206ENST00000489906 JMYQ8N9B5 988 aa17.03■□□□□ 0.32
VDAC1-206ENST00000489906 ANKRD31Q8N7Z5 1873 aa17.02■□□□□ 0.32
VDAC1-206ENST00000489906 PER1O15534 1290 aaPredicted RBP17.02■□□□□ 0.32
VDAC1-206ENST00000489906 A1BGP04217 495 aa17.02■□□□□ 0.32
VDAC1-206ENST00000489906 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
VDAC1-206ENST00000489906 PRR5LQ6MZQ0 368 aa17.02■□□□□ 0.32
VDAC1-206ENST00000489906 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
VDAC1-206ENST00000489906 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.31
VDAC1-206ENST00000489906 ZC3H4Q9UPT8 1303 aaKnown RBP17.01■□□□□ 0.31
VDAC1-206ENST00000489906 A0A087WZG4 1122 aa17.01■□□□□ 0.31
VDAC1-206ENST00000489906 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
VDAC1-206ENST00000489906 NPHP1O15259 732 aa17.01■□□□□ 0.31
VDAC1-206ENST00000489906 KCNQ3O43525 872 aa17.01■□□□□ 0.31
VDAC1-206ENST00000489906 COL11A2P13942 1736 aaPredicted RBP17.01■□□□□ 0.31
VDAC1-206ENST00000489906 COL3A1P02461 1466 aaPredicted RBP17■□□□□ 0.31
VDAC1-206ENST00000489906 POTECB2RU33 542 aa16.99■□□□□ 0.31
VDAC1-206ENST00000489906 ERFEQ4G0M1 354 aa16.99■□□□□ 0.31
VDAC1-206ENST00000489906 BRIP1Q9BX63 1249 aa16.99■□□□□ 0.31
VDAC1-206ENST00000489906 SCN7AQ01118 1682 aa16.99■□□□□ 0.31
VDAC1-206ENST00000489906 PDE6BP35913 854 aa16.98■□□□□ 0.31
VDAC1-206ENST00000489906 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
VDAC1-206ENST00000489906 PHACTR3Q96KR7 559 aa16.98■□□□□ 0.31
VDAC1-206ENST00000489906 FMNL2Q96PY5 1086 aa16.98■□□□□ 0.31
VDAC1-206ENST00000489906 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
VDAC1-206ENST00000489906 PRAMEF22A3QJZ6 481 aa16.97■□□□□ 0.31
VDAC1-206ENST00000489906 CAMTA2O94983 1202 aa16.97■□□□□ 0.31
VDAC1-206ENST00000489906 IL6STP40189 918 aaPredicted RBP16.97■□□□□ 0.31
VDAC1-206ENST00000489906 NPM2Q86SE8 214 aaKnown RBP16.97■□□□□ 0.31
VDAC1-206ENST00000489906 TNS4Q8IZW8 715 aa16.97■□□□□ 0.31
VDAC1-206ENST00000489906 CNBD1Q8NA66 436 aa16.97■□□□□ 0.31
VDAC1-206ENST00000489906 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
VDAC1-206ENST00000489906 BTBD11A6QL63 1104 aa16.96■□□□□ 0.31
VDAC1-206ENST00000489906 POTEIP0CG38 1075 aa16.96■□□□□ 0.31
VDAC1-206ENST00000489906 POTEJP0CG39 1038 aa16.96■□□□□ 0.31
VDAC1-206ENST00000489906 HSPA1AP0DMV8 641 aaKnown RBP16.96■□□□□ 0.31
VDAC1-206ENST00000489906 HSPA1BP0DMV9 641 aaKnown RBP16.96■□□□□ 0.31
VDAC1-206ENST00000489906 PRKAR2BP31323 418 aa16.96■□□□□ 0.31
VDAC1-206ENST00000489906 DPY19L2Q6NUT2 758 aa16.96■□□□□ 0.31
VDAC1-206ENST00000489906 TEX13AQ9BXU3 409 aaPredicted RBP16.96■□□□□ 0.31
VDAC1-206ENST00000489906 SIPA1L3O60292 1781 aaPredicted RBP16.96■□□□□ 0.31
VDAC1-206ENST00000489906 DDNO94850 711 aaPredicted RBP16.95■□□□□ 0.3
VDAC1-206ENST00000489906 DZIP3Q86Y13 1208 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms