RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 CNTNAP4Q9C0A0 1308 aa20.8■□□□□ 0.92
CLIC4-203ENST00000489758 STARD3NLO95772 234 aa20.8■□□□□ 0.92
CLIC4-203ENST00000489758 CRKLP46109 303 aaKnown RBP20.8■□□□□ 0.92
CLIC4-203ENST00000489758 RC3H1Q5TC82 1133 aaKnown RBP20.79■□□□□ 0.92
CLIC4-203ENST00000489758 AKT1S1Q96B36 256 aa20.79■□□□□ 0.92
CLIC4-203ENST00000489758 COL5A3P25940 1745 aaPredicted RBP20.78■□□□□ 0.92
CLIC4-203ENST00000489758 PSDA5PKW4 1024 aaPredicted RBP20.78■□□□□ 0.92
CLIC4-203ENST00000489758 A1BGP04217 495 aa20.78■□□□□ 0.92
CLIC4-203ENST00000489758 ANO8Q9HCE9 1232 aaPredicted RBP20.78■□□□□ 0.92
CLIC4-203ENST00000489758 CCDC87Q9NVE4 849 aa20.78■□□□□ 0.92
CLIC4-203ENST00000489758 NUP188Q5SRE5 1749 aa20.78■□□□□ 0.92
CLIC4-203ENST00000489758 NBPF26B4DH59 902 aa20.77■□□□□ 0.92
CLIC4-203ENST00000489758 EIF2S2P20042 333 aaKnown RBP20.77■□□□□ 0.92
CLIC4-203ENST00000489758 ZNF827Q17R98 1081 aa20.77■□□□□ 0.92
CLIC4-203ENST00000489758 HDGFL1Q5TGJ6 251 aa20.77■□□□□ 0.92
CLIC4-203ENST00000489758 NBPF14Q5TI25 921 aa20.77■□□□□ 0.92
CLIC4-203ENST00000489758 NBPF10Q6P3W6 841 aaKnown RBP20.77■□□□□ 0.92
CLIC4-203ENST00000489758 NBPF15Q8N660 670 aa20.77■□□□□ 0.92
CLIC4-203ENST00000489758 C4BP0C0L5 1744 aa20.77■□□□□ 0.92
CLIC4-203ENST00000489758 LAMB4A4D0S4 1761 aa20.77■□□□□ 0.91
CLIC4-203ENST00000489758 HMGB2P26583 209 aaKnown RBP20.76■□□□□ 0.91
CLIC4-203ENST00000489758 PDIA6Q15084 440 aa20.76■□□□□ 0.91
CLIC4-203ENST00000489758 NECTIN2Q92692 538 aa20.76■□□□□ 0.91
CLIC4-203ENST00000489758 ZBTB1Q9Y2K1 713 aa20.76■□□□□ 0.91
CLIC4-203ENST00000489758 ERBB4Q15303 1308 aa20.76■□□□□ 0.91
CLIC4-203ENST00000489758 CT47B1P0C2W7 299 aaPredicted RBP20.75■□□□□ 0.91
CLIC4-203ENST00000489758 AMIGO3Q86WK7 504 aa20.75■□□□□ 0.91
CLIC4-203ENST00000489758 PIP4K2AP48426 406 aaPredicted RBP20.74■□□□□ 0.91
CLIC4-203ENST00000489758 LRP10Q7Z4F1 713 aa20.74■□□□□ 0.91
CLIC4-203ENST00000489758 TAF1LQ8IZX4 1826 aa20.74■□□□□ 0.91
CLIC4-203ENST00000489758 GNPATO15228 680 aa20.73■□□□□ 0.91
CLIC4-203ENST00000489758 CANXP27824 592 aaKnown RBP20.73■□□□□ 0.91
CLIC4-203ENST00000489758 PROSER3Q2NL68 480 aa20.73■□□□□ 0.91
CLIC4-203ENST00000489758 CCDC30Q5VVM6 783 aa20.73■□□□□ 0.91
CLIC4-203ENST00000489758 AK7Q96M32 723 aa20.73■□□□□ 0.91
CLIC4-203ENST00000489758 CHPF2Q9P2E5 772 aa20.73■□□□□ 0.91
CLIC4-203ENST00000489758 TCERG1O14776 1098 aaKnown RBP20.72■□□□□ 0.91
CLIC4-203ENST00000489758 RPS6KA4O75676 772 aa20.72■□□□□ 0.91
CLIC4-203ENST00000489758 SLC15A2Q16348 729 aa20.72■□□□□ 0.91
CLIC4-203ENST00000489758 SMIM5Q71RC9 77 aa20.72■□□□□ 0.91
CLIC4-203ENST00000489758 DDX21Q9NR30 783 aaKnown RBP eCLIP20.72■□□□□ 0.91
CLIC4-203ENST00000489758 EIF5P55010 431 aaKnown RBP20.71■□□□□ 0.91
CLIC4-203ENST00000489758 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
CLIC4-203ENST00000489758 CHMP4AQ9BY43 222 aa20.71■□□□□ 0.91
CLIC4-203ENST00000489758 DBF4Q9UBU7 674 aaPredicted RBP20.71■□□□□ 0.91
CLIC4-203ENST00000489758 ANXA1P04083 346 aa20.7■□□□□ 0.9
CLIC4-203ENST00000489758 IL6STP40189 918 aaPredicted RBP20.7■□□□□ 0.9
CLIC4-203ENST00000489758 R3HDM1Q15032 1099 aaKnown RBP20.7■□□□□ 0.9
CLIC4-203ENST00000489758 STK32BQ9NY57 414 aa20.7■□□□□ 0.9
CLIC4-203ENST00000489758 MYL6BP14649 208 aa20.69■□□□□ 0.9
CLIC4-203ENST00000489758 TFCP2L1Q9NZI6 479 aa20.69■□□□□ 0.9
CLIC4-203ENST00000489758 RTCBQ9Y3I0 505 aaKnown RBP20.69■□□□□ 0.9
CLIC4-203ENST00000489758 LRP5O75197 1615 aa20.68■□□□□ 0.9
CLIC4-203ENST00000489758 RARSP54136 660 aaKnown RBP20.68■□□□□ 0.9
CLIC4-203ENST00000489758 SSH1Q8WYL5 1049 aa20.68■□□□□ 0.9
CLIC4-203ENST00000489758 MYH14Q7Z406 1995 aaKnown RBP20.67■□□□□ 0.9
CLIC4-203ENST00000489758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.67■□□□□ 0.9
CLIC4-203ENST00000489758 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
CLIC4-203ENST00000489758 SSFA2P28290 1259 aa20.67■□□□□ 0.9
CLIC4-203ENST00000489758 ALDH1L2Q3SY69 923 aa20.67■□□□□ 0.9
CLIC4-203ENST00000489758 STK31Q9BXU1 1019 aa20.67■□□□□ 0.9
CLIC4-203ENST00000489758 HYPKQ9NX55 129 aa20.67■□□□□ 0.9
CLIC4-203ENST00000489758 PNPLA7Q6ZV29 1317 aa20.67■□□□□ 0.9
CLIC4-203ENST00000489758 COL15A1P39059 1388 aa20.67■□□□□ 0.9
CLIC4-203ENST00000489758 SRCAPQ6ZRS2 3230 aa20.67■□□□□ 0.9
CLIC4-203ENST00000489758 PHF14O94880 888 aa20.66■□□□□ 0.9
CLIC4-203ENST00000489758 ADRA2BP18089 450 aa20.66■□□□□ 0.9
CLIC4-203ENST00000489758 MRPL50Q8N5N7 158 aaKnown RBP20.66■□□□□ 0.9
CLIC4-203ENST00000489758 G2E3Q7L622 706 aa20.65■□□□□ 0.9
CLIC4-203ENST00000489758 ARHGEF1Q92888 912 aaKnown RBP20.65■□□□□ 0.9
CLIC4-203ENST00000489758 BCL2L13Q9BXK5 485 aa20.65■□□□□ 0.9
CLIC4-203ENST00000489758 PHAXQ9H814 394 aaKnown RBP20.65■□□□□ 0.9
CLIC4-203ENST00000489758 TRAPPC3LQ5T215 181 aa20.64■□□□□ 0.89
CLIC4-203ENST00000489758 COL23A1Q86Y22 540 aaPredicted RBP20.64■□□□□ 0.89
CLIC4-203ENST00000489758 XAGE3Q8WTP9 111 aa20.64■□□□□ 0.89
CLIC4-203ENST00000489758 ZNF330Q9Y3S2 320 aaPredicted RBP20.64■□□□□ 0.89
CLIC4-203ENST00000489758 UBR3Q6ZT12 1888 aa20.64■□□□□ 0.89
CLIC4-203ENST00000489758 BRPF1P55201 1214 aaPredicted RBP20.63■□□□□ 0.89
CLIC4-203ENST00000489758 TTLL7Q6ZT98 887 aa20.63■□□□□ 0.89
CLIC4-203ENST00000489758 COPS6Q7L5N1 327 aa20.63■□□□□ 0.89
CLIC4-203ENST00000489758 FLAD1Q8NFF5 587 aa20.63■□□□□ 0.89
CLIC4-203ENST00000489758 SMC4Q9NTJ3 1288 aa20.63■□□□□ 0.89
CLIC4-203ENST00000489758 A0A087WZG4 1122 aa20.62■□□□□ 0.89
CLIC4-203ENST00000489758 PDGFDQ9GZP0 370 aaPredicted RBP20.62■□□□□ 0.89
CLIC4-203ENST00000489758 BCAR3O75815 825 aa20.61■□□□□ 0.89
CLIC4-203ENST00000489758 DZIP3Q86Y13 1208 aaKnown RBP20.61■□□□□ 0.89
CLIC4-203ENST00000489758 RCAN3Q9UKA8 241 aa20.61■□□□□ 0.89
CLIC4-203ENST00000489758 TBC1D2BQ9UPU7 963 aa20.61■□□□□ 0.89
CLIC4-203ENST00000489758 TUBGCP6Q96RT7 1819 aa20.61■□□□□ 0.89
CLIC4-203ENST00000489758 USP42Q9H9J4 1324 aaKnown RBP20.6■□□□□ 0.89
CLIC4-203ENST00000489758 CAMTA2O94983 1202 aa20.6■□□□□ 0.89
CLIC4-203ENST00000489758 AIMP1Q12904 312 aaKnown RBP20.6■□□□□ 0.89
CLIC4-203ENST00000489758 FLIIQ13045 1269 aa20.6■□□□□ 0.89
CLIC4-203ENST00000489758 SRP68Q9UHB9 627 aaKnown RBP20.6■□□□□ 0.89
CLIC4-203ENST00000489758 NARFQ9UHQ1 456 aa20.6■□□□□ 0.89
CLIC4-203ENST00000489758 QSER1Q2KHR3 1735 aa20.59■□□□□ 0.89
CLIC4-203ENST00000489758 RFC4P35249 363 aa20.59■□□□□ 0.89
CLIC4-203ENST00000489758 BCL2L12Q9HB09 334 aa20.59■□□□□ 0.89
CLIC4-203ENST00000489758 MAP3K15Q6ZN16 1313 aa20.58■□□□□ 0.89
CLIC4-203ENST00000489758 KIF6Q6ZMV9 814 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms